prot_Ecto-sp13_S_contig18888.5965.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18888.5965.1
Unique Nameprot_Ecto-sp13_S_contig18888.5965.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length139
Homology
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: D8LSM6_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM6_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 1.880e-91
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPYSDK 138
            VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPYSDK
Sbjct:  543 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPYSDK 680          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: A0A836CJC9_9STRA (GTPase Der n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC9_9STRA)

HSP 1 Score: 211 bits (538), Expect = 9.710e-66
Identity = 102/138 (73.91%), Postives = 114/138 (82.61%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNR---RNPKPY 135
            V+WA++ FTSA TGQR   +FD VDE   QHR+R+KTSVLNEVLRDAVLWQAPP++K+S   QGKIYYCNQ+A RPPTVA+FCN PKLF DNYKRYL+RKFREQLG KSTPIR LWRGKRLRRM QD     R PKPY
Sbjct:  196 VRWADIVFTSALTGQRTLSIFDKVDEAVEQHRKRIKTSVLNEVLRDAVLWQAPPTRKNS--QQGKIYYCNQVAARPPTVAIFCNAPKLFSDNYKRYLERKFREQLGFKSTPIRMLWRGKRLRRMVQDESKKSRYPKPY 331          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: A0A7S2SSP7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSP7_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.050e-51
Identity = 75/130 (57.69%), Postives = 94/130 (72.31%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRR 130
            V WA +   SA TGQRC K++D +D     HR+R KTSVLN+VL+D V WQ PP  +  G  QGKIYYCNQ+   PPTVA+FCN    F DNYKR+++RKFRE LG + TP+RFLWRGKR+R +E+D +R
Sbjct:    4 VSWAPIALVSALTGQRCPKIYDAIDTSVENHRQRFKTSVLNDVLQDTVRWQPPPILRKGGG-QGKIYYCNQVGRSPPTVAMFCNRASFFSDNYKRFVERKFRESLGFEGTPVRFLWRGKRVRTLERDKKR 132          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: W7TQC4_9STRA (GTPase Der n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQC4_9STRA)

HSP 1 Score: 181 bits (458), Expect = 7.140e-51
Identity = 84/135 (62.22%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPY 135
            V WA+V FTSA TGQRC K+FD +D+ +  HR+RVKTS+LNEVL +A++WQ PP+ KSS   QG++YYCNQ+AT PP+V VFCNNPKLF D+YKRYLDRKFRE L L  TPIR+ +RGK+LR++ +    +P PY
Sbjct:  548 VSWADVLFTSALTGQRCHKIFDAIDKASAAHRQRVKTSILNEVLGEALVWQRPPTVKSS--QQGRVYYCNQVATEPPSVVVFCNNPKLFPDSYKRYLDRKFRESLDLTGTPIRWYFRGKKLRQLAKQG--SPVPY 678          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: A0A7R9Z1K7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z1K7_9STRA)

HSP 1 Score: 171 bits (434), Expect = 7.730e-51
Identity = 81/135 (60.00%), Postives = 104/135 (77.04%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKRLRRMEQDNRRNPKP 134
            V+WA + FTSA TGQR  K++  VDE    HRRRV T+VLNEVLRDA+LWQ PP++++   +Q KIYYCNQ++TRPPTV VFCN+PKL  DNY+RYLDRKFRE L G ++TPIR+++RG+R R M +    N +P
Sbjct:  122 VRWAPILFTSAATGQRVGKVYGAVDEALKAHRRRVSTAVLNEVLRDAILWQPPPARRNG--AQAKIYYCNQVSTRPPTVVVFCNDPKLITDNYRRYLDRKFRESLDGFEATPIRWIYRGRRARDMRRQRAMNGQP 254          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: A0A7S2UC67_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UC67_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.800e-50
Identity = 75/135 (55.56%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKRLRRMEQDNRRNPKP 134
            ++W+ + FTSA TGQRC K++  VDE    HRRR+ T++LNEVLRDA+LWQ PP++++   +Q KIYYCNQ++TRPPT+ +FCN+PKL  DNY+RYLDRKFRE L G ++TPIR+++RG+R+R + ++ + N  P
Sbjct:  189 IRWSPILFTSAATGQRCNKVYGAVDEAIQAHRRRISTAILNEVLRDAILWQPPPARRNG--AQAKIYYCNQVSTRPPTIVIFCNDPKLVNDNYRRYLDRKFRESLDGFEATPIRWIFRGRRVRDIMRNRKMNGDP 321          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: A0A6U3PFH2_9STRA (GTPase Der n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PFH2_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.210e-49
Identity = 79/135 (58.52%), Postives = 107/135 (79.26%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKRLRRMEQDNRRNPKP 134
            V+WA + F SA TGQRC K++  VDE  V HRRR+ T++LNEVLRDA+LWQ PP++++   +Q KIYYCNQ++TRPPT+ VFCN+PKL  DNYKRYLDRKFRE L G ++TPIR+++RG+R+R + +  + N +P
Sbjct:  494 VRWAPILFISAATGQRCGKIYATVDEAIVAHRRRISTAILNEVLRDAILWQPPPARRNG--AQAKIYYCNQVSTRPPTIVVFCNDPKLINDNYKRYLDRKFRESLDGFEATPIRWIFRGRRVRDIARSRKMNGEP 626          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: A0A6U0WAC7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WAC7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 9.220e-49
Identity = 73/126 (57.94%), Postives = 96/126 (76.19%), Query Frame = 0
Query:    2 KWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQLGLKSTPIRFLWRGKRLRRMEQD 127
            +WA+  F SA TGQRC K++D V   A QHRRR+ T++LNEV+RDAV+WQ PP    +   QG+IYY NQI+T PPT+ +FCN+P  FGD YKRYLDRKFRE LG + +PIR++WRGK+LR  +++
Sbjct:  135 RWAKPVFISALTGQRCDKIYDAVKSAARQHRRRIPTAILNEVIRDAVMWQPPPK---TNQKQGRIYYANQISTAPPTIVLFCNDPSAFGDGYKRYLDRKFRENLGFEGSPIRWVWRGKKLRAAKKE 257          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: A0A7S1ZEG6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZEG6_TRICV)

HSP 1 Score: 162 bits (409), Expect = 3.870e-47
Identity = 76/135 (56.30%), Postives = 100/135 (74.07%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKRLRRMEQDNRRNPKP 134
            V+WA + F SA TGQR  K++  VD+    HR+R  T+VLNEVLRDA+LWQ PP+K++   +Q KIYYCNQ++TRPPTV VFCN+PKL  DNY+RYLDRK RE L G ++TPIR+++RG+R R + +    N  P
Sbjct:  116 VRWAPILFVSAATGQRVGKVYGAVDDALRAHRKRASTAVLNEVLRDAILWQPPPAKRNG--AQAKIYYCNQVSTRPPTVVVFCNDPKLITDNYRRYLDRKMRESLDGFEATPIRWIYRGRRARDVRRQRSMNGDP 248          
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Match: A0A7S4IQC5_9STRA (GTPase Der n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQC5_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.490e-47
Identity = 79/135 (58.52%), Postives = 104/135 (77.04%), Query Frame = 0
Query:    1 VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLWQAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRKFREQL-GLKSTPIRFLWRGKRLRRMEQDNRRNPKP 134
            ++WA + FTSA TGQR  K++  VDE    HR+RV T+VLNEVLRDA+LWQ PP++++   +Q KIYYCNQ++TRPPTV VFCN+PKL  DNY+RYLDRKFRE L G ++TPIR+++RG+R R M ++   N  P
Sbjct:  525 IRWAPIIFTSAATGQRVGKIYGAVDEALKAHRKRVSTAVLNEVLRDAILWQPPPARRNG--AQAKIYYCNQVSTRPPTVVVFCNDPKLITDNYRRYLDRKFRESLDGFEATPIRWIYRGRRARDMRRNRNMNGDP 657          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18888.5965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSM6_ECTSI1.880e-91100.00GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A836CJC9_9STRA9.710e-6673.91GTPase Der n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A7S2SSP7_9STRA1.050e-5157.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TQC4_9STRA7.140e-5162.22GTPase Der n=2 Tax=Monodopsidaceae TaxID=425072 Re... [more]
A0A7R9Z1K7_9STRA7.730e-5160.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2UC67_9STRA1.800e-5055.56Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A6U3PFH2_9STRA3.210e-4958.52GTPase Der n=1 Tax=Ditylum brightwellii TaxID=4924... [more]
A0A6U0WAC7_9STRA9.220e-4957.94Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1ZEG6_TRICV3.870e-4756.30Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S4IQC5_9STRA4.490e-4758.52GTPase Der n=1 Tax=Odontella aurita TaxID=265563 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032859GTPase Der, C-terminal KH-domain-likePFAMPF14714KH_dom-likecoord: 34..117
e-value: 2.1E-29
score: 101.7
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 34..120
e-value: 2.3E-28
score: 100.3
NoneNo IPR availablePANTHERPTHR43834FAMILY NOT NAMEDcoord: 1..124
NoneNo IPR availablePANTHERPTHR43834:SF2CLAMP-BINDING PROTEIN CRFC-RELATEDcoord: 1..124
NoneNo IPR availableSUPERFAMILY82653Probable GTPase Der, C-terminal domaincoord: 34..105

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18888contigEcto-sp13_S_contig18888:119..3408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18888.5965.1mRNA_Ecto-sp13_S_contig18888.5965.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18888 119..3408 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18888.5965.1 ID=prot_Ecto-sp13_S_contig18888.5965.1|Name=mRNA_Ecto-sp13_S_contig18888.5965.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=139bp
VKWAEVCFTSAKTGQRCTKLFDLVDEVAVQHRRRVKTSVLNEVLRDAVLW
QAPPSKKSSGASQGKIYYCNQIATRPPTVAVFCNNPKLFGDNYKRYLDRK
FREQLGLKSTPIRFLWRGKRLRRMEQDNRRNPKPYSDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032859KH_dom-like
IPR015946KH_dom-like_a/b