prot_Ecto-sp13_S_contig18887.5964.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18887.5964.1
Unique Nameprot_Ecto-sp13_S_contig18887.5964.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length295
Homology
BLAST of mRNA_Ecto-sp13_S_contig18887.5964.1 vs. uniprot
Match: A0A6H5K2R8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R8_9PHAE)

HSP 1 Score: 529 bits (1363), Expect = 1.550e-186
Identity = 275/298 (92.28%), Postives = 283/298 (94.97%), Query Frame = 0
Query:    1 MLGSIFLADHPRPESLLMWVMACYEELPPLQ---DAGGETEEPASFVDDASAVVKSRGDVGVVSHAYSALLLCGGGSKLASSISTRDPAGDGGKSTSVPCLYEISVDTAQKRAYASNCFTFLSSRCAQDDGQHKDGVLAEQVTSFILELSDLAQTDVVSLEVLCLVLLEPWRQATCTAKHQAEDSACDSQQESLGTSLNGAVLKQASELVEGFLDDARLWSLDEWLLGEISHRYESFARAYVEKLTRSREELVRRH-LTPADWSGLCLRKEDVQSRLGVLCSRSERLKRLVFRTIALN 294
            MLGS FLADHP PESLLMWVMACYEELPPLQ   DAGGET++PASFV+DASAVVKSRGDVGVVSHAYSALLLCGGGSKLASSISTRD AGDGGKSTSVPCLYE+SVDTAQKRAYASNCFTFLSSRCAQDDGQHK GVLAEQVTSFILELS+LAQTD+VSLE+LCLVLLEPWRQATCTAKHQAE SACDSQQESLGTSLN AVLKQAS LVEGFL DARLWSLDEWLLGEISHRYESFARAYVEKLTRSREELVRR  LTPADW+GLC RKEDVQSRLGVLCSRSERLKRLVFRTIA N
Sbjct:  155 MLGSTFLADHPHPESLLMWVMACYEELPPLQAHQDAGGETDQPASFVNDASAVVKSRGDVGVVSHAYSALLLCGGGSKLASSISTRDAAGDGGKSTSVPCLYEMSVDTAQKRAYASNCFTFLSSRCAQDDGQHKHGVLAEQVTSFILELSELAQTDIVSLEILCLVLLEPWRQATCTAKHQAEGSACDSQQESLGTSLNAAVLKQASALVEGFLGDARLWSLDEWLLGEISHRYESFARAYVEKLTRSREELVRRECLTPADWTGLCSRKEDVQSRLGVLCSRSERLKRLVFRTIASN 452          
BLAST of mRNA_Ecto-sp13_S_contig18887.5964.1 vs. uniprot
Match: D7FVC5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC5_ECTSI)

HSP 1 Score: 508 bits (1307), Expect = 4.110e-178
Identity = 268/298 (89.93%), Postives = 279/298 (93.62%), Query Frame = 0
Query:    1 MLGSIFLADHPRPESLLMWVMACYEELPPLQ---DAGGETEEPASFVDDASAVVKSRGDVGVVSHAYSALLLCGGGSKLASSISTRDPAGDGGKSTSVPCLYEISVDTAQKRAYASNCFTFLSSRCAQDDGQHKDGVLAEQVTSFILELSDLAQTDVVSLEVLCLVLLEPWRQATCTAKHQAEDSACDSQQESLGTSLNGAVLKQASELVEGFLDDARLWSLDEWLLGEISHRYESFARAYVEKLTRSREELVRR-HLTPADWSGLCLRKEDVQSRLGVLCSRSERLKRLVFRTIALN 294
            MLGS FL DHPRPESL+MW+MACYEELPPLQ   DAGGET++ ASFVDDASAVVKSRGDVGVVSHAYSALLLCGGGSKLASSISTRD AG GGKST VPCLYE+SVDTAQKRAYASNCFTFLSSRCAQ DGQHK GVLAEQVTSFILELS+LAQTD+VSLE+LCLVLLEPWRQAT TAKHQAEDSACDSQQESLGTSLNGA+LKQ    VEGFLDDARLWSLDEWLLGEISHR+ESFARAYVEKLTRSREELVRR +LT AD SGLCLRKEDVQSRLGVLCSRSERLKRLVFRTIALN
Sbjct:  153 MLGSTFLVDHPRPESLVMWIMACYEELPPLQAHQDAGGETDQSASFVDDASAVVKSRGDVGVVSHAYSALLLCGGGSKLASSISTRDAAGGGGKSTRVPCLYEMSVDTAQKRAYASNCFTFLSSRCAQGDGQHKHGVLAEQVTSFILELSELAQTDIVSLEILCLVLLEPWRQATRTAKHQAEDSACDSQQESLGTSLNGALLKQ----VEGFLDDARLWSLDEWLLGEISHRHESFARAYVEKLTRSREELVRREYLTSADSSGLCLRKEDVQSRLGVLCSRSERLKRLVFRTIALN 446          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18887.5964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2R8_9PHAE1.550e-18692.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVC5_ECTSI4.110e-17889.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18887contigEcto-sp13_S_contig18887:1838..3107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18887.5964.1mRNA_Ecto-sp13_S_contig18887.5964.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18887 1589..3405 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18887.5964.1 ID=prot_Ecto-sp13_S_contig18887.5964.1|Name=mRNA_Ecto-sp13_S_contig18887.5964.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
MLGSIFLADHPRPESLLMWVMACYEELPPLQDAGGETEEPASFVDDASAV
VKSRGDVGVVSHAYSALLLCGGGSKLASSISTRDPAGDGGKSTSVPCLYE
ISVDTAQKRAYASNCFTFLSSRCAQDDGQHKDGVLAEQVTSFILELSDLA
QTDVVSLEVLCLVLLEPWRQATCTAKHQAEDSACDSQQESLGTSLNGAVL
KQASELVEGFLDDARLWSLDEWLLGEISHRYESFARAYVEKLTRSREELV
RRHLTPADWSGLCLRKEDVQSRLGVLCSRSERLKRLVFRTIALN*
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