prot_Ecto-sp13_S_contig18883.5960.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18883.5960.1
Unique Nameprot_Ecto-sp13_S_contig18883.5960.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length208
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18883.5960.1 vs. uniprot
Match: A0A6H5L3D5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3D5_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 3.760e-115
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0 
Query:    3 QILAKGLSGLNSSRHGHGGASLNTSRHGGGAGXXXXXXXGAVDTRPAIVRAATSLNESRHKLTQGLRRTVSRSHLSDADQGQMQSPVLIYHSTVVEEGSNILILKGTLRRRVGTATLSSLREEKAVTIIRDVGGPVEFTEGSVVFIMPAVLMARASTAHQMLMREIEQRHRDLTAAAAADGMRPPKLESGIVSIDAGGSPGPRLGK 208
            +ILAKGLSGLNSSRHGHGGASLNTSRH GG G  XXXXXGAVDTRPAIVRAATSLNESRHKLTQGLRRTVSRSHLSDADQGQMQSP  I HS VVEEGS ILILKGTLRRRVGTATLSSL+EEKAVTIIRDVGGPVEFTEGSVVFIMPAVLMARASTAHQMLMREIEQRHRDLTAAAAADGMR  KLESGIVS+DAG SPGPRL K
Sbjct:   29 RILAKGLSGLNSSRHGHGGASLNTSRHAGGTGGGXXXXXGAVDTRPAIVRAATSLNESRHKLTQGLRRTVSRSHLSDADQGQMQSPGPICHSMVVEEGSYILILKGTLRRRVGTATLSSLKEEKAVTIIRDVGGPVEFTEGSVVFIMPAVLMARASTAHQMLMREIEQRHRDLTAAAAADGMRSLKLESGIVSMDAGASPGPRLAK 234
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BLAST of mRNA_Ecto-sp13_S_contig18883.5960.1 vs. uniprot
Match: D8LKR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR0_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 2.280e-103
Identity = 183/210 (87.14%), Postives = 188/210 (89.52%), Query Frame = 0 
Query:    3 QILAKGLSGLNSSRHGHGGASLNTSRHGGGAGXXXXXXXGA----VDTRPAIVRAATSLNESRHKLTQGLRRTVSRSHLSDADQGQMQSPVLIYHSTVVEEGSNILILKGTLRRRVGTATLSSLREEKAVTIIRDVGGPVEFTEGSVVFIMPAVLMARASTAHQMLMREIEQRHRDLTAAAAADGMRPPKLESGIVSIDAGGSPGPRLGK 208
            +ILAKGL GLNSSRHGHGGASLNTSRHGG   XXXXXXX      VDTRPAIVRAATSLNESRHKLTQGLRRTVSR  LSDADQGQM SPV I HS VVEEGSNILILKGTLRRRVGTATLSSL+EEKAVTIIR VGGPVEFTEGSVVFIMPAVLMARAS AHQMLMREIEQRHRDLTAAAA DG+RP KLESG+VS+DAG SPGPRL K
Sbjct:   29 RILAKGLGGLNSSRHGHGGASLNTSRHGGXXXXXXXXXXXXXXXXVDTRPAIVRAATSLNESRHKLTQGLRRTVSRGQLSDADQGQMHSPVPICHSMVVEEGSNILILKGTLRRRVGTATLSSLKEEKAVTIIRGVGGPVEFTEGSVVFIMPAVLMARASAAHQMLMREIEQRHRDLTAAAA-DGIRPAKLESGVVSVDAGASPGPRLAK 237
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18883.5960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L3D5_9PHAE3.760e-11592.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKR0_ECTSI2.280e-10387.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18883contigEcto-sp13_S_contig18883:814..3065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18883.5960.1mRNA_Ecto-sp13_S_contig18883.5960.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18883 814..3065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18883.5960.1 ID=prot_Ecto-sp13_S_contig18883.5960.1|Name=mRNA_Ecto-sp13_S_contig18883.5960.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=208bp
SSQILAKGLSGLNSSRHGHGGASLNTSRHGGGAGGGGGGGSGAVDTRPAI
VRAATSLNESRHKLTQGLRRTVSRSHLSDADQGQMQSPVLIYHSTVVEEG
SNILILKGTLRRRVGTATLSSLREEKAVTIIRDVGGPVEFTEGSVVFIMP
AVLMARASTAHQMLMREIEQRHRDLTAAAAADGMRPPKLESGIVSIDAGG
SPGPRLGK
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