prot_Ecto-sp13_S_contig1887.5951.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1887.5951.1
Unique Nameprot_Ecto-sp13_S_contig1887.5951.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length282
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1887.5951.1 vs. uniprot
Match: A0A6H5KLC2_9PHAE (FHA_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLC2_9PHAE)

HSP 1 Score: 472 bits (1214), Expect = 1.730e-166
Identity = 254/281 (90.39%), Postives = 260/281 (92.53%), Query Frame = 0 
Query:    1 MALLQSMELEQQQGSGIAADTTSLQEPGAALAQQXXXXXXXXXXXXXXDSPIRRADTPCPAALRRRRQQQDGSIGRFILLPDRAETSRRFIPLEPGTTTVVGRCKKSGIRDHHVSRRHVEITVPEEGDEGFAQGHCRIKYIGRNCRVVLVGGILLKAGQEVPAAPGTRVVLNYNNKGLPRYSYTLLPSNNLPVTTPRTARCSVGMGAAGAGDGRPWRGGPVSSPQRLGGSDVEMGSGRKQPFHGDAHLHAYNRPSRYSAIPSKQQRPRPGGRFRKEAQEKV 281
            MALLQSM+LEQQ GS IAA TTS QE GAAL   XXXXXXXXXXXX  DSPIRRA TPCPAALR RRQQQDGSIGR ILLPDRAETSRRFIPLEPGTTTVVGRCKKSGIRDHHVSRRHVEIT PEEGDEGFAQGHCRIKYIGRNCRVVL+GGILLK+GQEVPAAPGTRVVLNYNNKGLPRYSYTLLP+NNLP TTPRTA CSVGMGAAGAGDGRPWRGGPVSS  RLG SD+EMGSGRKQPFHGDAHLHAYNRPSRYS I SKQQRPRPGGRFRKEAQEK+
Sbjct:    1 MALLQSMDLEQQ-GSVIAAHTTSSQEQGAALXXXXXXXXXXXXXXXERDSPIRRAGTPCPAALRWRRQQQDGSIGRLILLPDRAETSRRFIPLEPGTTTVVGRCKKSGIRDHHVSRRHVEITAPEEGDEGFAQGHCRIKYIGRNCRVVLIGGILLKSGQEVPAAPGTRVVLNYNNKGLPRYSYTLLPANNLPATTPRTAHCSVGMGAAGAGDGRPWRGGPVSSSHRLGDSDMEMGSGRKQPFHGDAHLHAYNRPSRYSTIASKQQRPRPGGRFRKEAQEKL 280
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BLAST of mRNA_Ecto-sp13_S_contig1887.5951.1 vs. uniprot
Match: D8LR39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR39_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 1.570e-36
Identity = 70/78 (89.74%), Postives = 72/78 (92.31%), Query Frame = 0 
Query:  205 MGAAGAGDGRPWRGGPVSS-PQRLGGSDVEMGSGRKQPFHGDAHLHAYNRPSRYSAIPSKQQRPRPGGRFRKEAQEKV 281
            MGAA AGDGRPWRGGPVSS P+RLGGSDVEMGSGR QPFHGDAHL AYNRPSRYS I SKQQRPRPGGRFRKEAQEK+
Sbjct:    1 MGAARAGDGRPWRGGPVSSSPRRLGGSDVEMGSGRTQPFHGDAHLDAYNRPSRYSTIASKQQRPRPGGRFRKEAQEKL 78
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1887.5951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLC2_9PHAE1.730e-16690.39FHA_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LR39_ECTSI1.570e-3689.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 29..49
NoneNo IPR availableGENE3D2.60.200.20coord: 77..184
e-value: 2.1E-8
score: 35.9
IPR041388PNK, FHA domainPFAMPF17913FHA_2coord: 86..172
e-value: 3.6E-6
score: 27.1
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 87..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1887contigEcto-sp13_S_contig1887:11604..14824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1887.5951.1mRNA_Ecto-sp13_S_contig1887.5951.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1887 11604..14824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1887.5951.1 ID=prot_Ecto-sp13_S_contig1887.5951.1|Name=mRNA_Ecto-sp13_S_contig1887.5951.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=282bp
MALLQSMELEQQQGSGIAADTTSLQEPGAALAQQQEQRQEQQKQEQERDS
PIRRADTPCPAALRRRRQQQDGSIGRFILLPDRAETSRRFIPLEPGTTTV
VGRCKKSGIRDHHVSRRHVEITVPEEGDEGFAQGHCRIKYIGRNCRVVLV
GGILLKAGQEVPAAPGTRVVLNYNNKGLPRYSYTLLPSNNLPVTTPRTAR
CSVGMGAAGAGDGRPWRGGPVSSPQRLGGSDVEMGSGRKQPFHGDAHLHA
YNRPSRYSAIPSKQQRPRPGGRFRKEAQEKVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041388FHA_2
IPR008984SMAD_FHA_dom_sf