prot_Ecto-sp13_S_contig1886.5949.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1886.5949.1
Unique Nameprot_Ecto-sp13_S_contig1886.5949.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length272
Homology
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: D8LFT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT4_ECTSI)

HSP 1 Score: 422 bits (1084), Expect = 4.850e-146
Identity = 229/272 (84.19%), Postives = 237/272 (87.13%), Query Frame = 0
Query:    1 AYEARQKQNQLGPGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGSTKHALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWECPESTKVDKKKLDKNVKKDDAVGTASADDVVPGPSDSGKDRGPASKEARGGXXXXXXXXXXXXAVNGGAEEGTPKRLRTIGSSGASSAR-GSKRALASRIGGDDLEDDGYYDPEDVPDASFEPPDGTEEQLGSGSSGGVAHQPSGKGGSSAKRKLSSKVVVF 271
            AYEAR+KQNQLGPGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGS KHALRVCPAPKQKDGSLP+ATCF+CKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSW+CPESTKVDKKKL+KNVKKDDA GTASA D VP P DSGKDRG ASKEARG XXXXXXXXXXXX                     ASSAR GSKRA ASRIGGDDLEDDGYYDP+DVPDASFE PDGTEE+L SGSSGGVA Q SGKGGSSAKR+LSSKVVVF
Sbjct:   80 AYEAREKQNQLGPGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGSAKHALRVCPAPKQKDGSLPYATCFICKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWDCPESTKVDKKKLNKNVKKDDAAGTASAADDVPDPGDSGKDRGTASKEARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSARAGSKRAPASRIGGDDLEDDGYYDPDDVPDASFEHPDGTEEKLWSGSSGGVASQGSGKGGSSAKRQLSSKVVVF 351          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: A0A2H9TNT6_9FUNG (CCHC-type domain-containing protein n=1 Tax=Paramicrosporidium saccamoebae TaxID=1246581 RepID=A0A2H9TNT6_9FUNG)

HSP 1 Score: 105 bits (263), Expect = 3.910e-22
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   16 NKTRCLGCRAWGHIVANCPEAKAATGICFNCGSTKHALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWEC 111
            +K  CL CR  GH V  CP    A+ IC+NCGS  H L+ C  P+  +  LP+A+C+VC   GH++  C +N  G+YP+GG C++CGSK HL+ +C
Sbjct:   48 SKPVCLKCRKRGHSVKYCPAG--ASSICYNCGSHTHTLKACRQPRSNE--LPYASCYVCGGTGHLAGQCPKNERGIYPRGGGCRFCGSKQHLARDC 139          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: A0A2A9MHL6_9APIC (Zinc knuckle domain-containing protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MHL6_9APIC)

HSP 1 Score: 99.4 bits (246), Expect = 4.220e-20
Identity = 52/126 (41.27%), Postives = 65/126 (51.59%), Query Frame = 0
Query:   20 CLGCRAWGHIVANCP-------------------EAKAA---TGICFNCGSTKHALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWECPESTKVDKKKLD 123
            CL CR  GH++ NCP                   EAKA    +G+CFNCG+T H L+ C   ++ DGSLP A          +SA C Q+  G YPKGG C+ CGS +HL  ECPE  K  K+  D
Sbjct:  272 CLRCREKGHVLENCPLATATGPNSASPDAAAKEGEAKARPMMSGVCFNCGATDHTLKNCKKKRKPDGSLPFALXXXXXXXXXLSAGCPQSTTGKYPKGGCCRTCGSIYHLQIECPEFQKQQKELAD 397          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: A0A0C2XNF4_9AGAM (Uncharacterized protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2XNF4_9AGAM)

HSP 1 Score: 96.3 bits (238), Expect = 4.890e-20
Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0
Query:    6 QKQNQLGPGANKTRCLGCRAWGHIVANCP-------EAKAATGICFNCGSTKHALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGG 96
            ++Q ++      T C  CR  GH   +CP       ++KA  GIC+ CGS+ H L  C  P+ + GSLP A+CFVCK  GH+++ C QN  GVYP GG
Sbjct:   75 RRQRRIQDRMMATTCFACRQRGHAAKDCPTNQGGGNKSKAGIGICYRCGSSNHTLSKCRKPRDEAGSLPFASCFVCKGTGHLASTCPQNEKGVYPNGG 172          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: A0A1Y2CGT7_9FUNG (Uncharacterized protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CGT7_9FUNG)

HSP 1 Score: 94.4 bits (233), Expect = 7.180e-19
Identity = 47/128 (36.72%), Postives = 58/128 (45.31%), Query Frame = 0
Query:   17 KTRCLGCRAWGHIVANCPE---------------------------------AKAATGICFNCGSTKHALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWEC 111
            K  C  CR  GH V NCP                                  A A  GIC+ CGST+H    C      D   P A+CFVCKA GH+++ C +N  G+YP GG CK+CGS  HL+ +C
Sbjct:  129 KMTCFLCRQKGHSVKNCPRSGDAAKLAAAEKASALDLDDQDLAAIDAEMEKSALAMEGICYRCGSTEHKSSQCKKKLNSDNPFPFASCFVCKATGHLASACPKNDKGMYPNGGSCKFCGSVKHLAKDC 256          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: A0A835ZFQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ1_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.670e-17
Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 0
Query:   15 ANKTRCLGCRAWGHIVANCPEA--KAATGICFNCGSTKHALRVCPAP---KQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWECPE-STKVDK 119
            ANK  CLGCR  GH++ +C +A  +AA+ +C+ CGST+H L+ CP     + K      AT               QNA G+YPKGG CK C S  HL+ +CPE  TK D+
Sbjct:  113 ANKLYCLGCRGKGHLIKDCKKATARAASVVCYRCGSTEHTLKGCPEEARARDKRAVTTFATXXXXXXXXXXXXXXXQNARGIYPKGGCCKICESVRHLASDCPERGTKRDR 223          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: UPI0006B0A7E6 (zinc finger CCHC domain-containing protein 9-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0A7E6)

HSP 1 Score: 70.9 bits (172), Expect = 2.830e-10
Identity = 36/98 (36.73%), Postives = 44/98 (44.90%), Query Frame = 0
Query:   20 CLGCRAWGHIVANCP----EAKAATGICFNCGSTKHALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWECPE 113
            C  CR  GH++A CP    + +  T I               A K    S P A C        +S  C +N NG+YPKGG CK CGS  HL  +CPE
Sbjct:  310 CFRCRKPGHMIAQCPILEKDMEQGTSIXXXXXXXXXXXXXXXARKLGKESFPFAKCXXXXXXXXLSRQCSKNPNGLYPKGGNCKMCGSVEHLKKDCPE 407          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: A0A2P6MPG5_9EUKA (Zinc finger protein containing CCHC type domain n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MPG5_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 4.200e-9
Identity = 34/94 (36.17%), Postives = 41/94 (43.62%), Query Frame = 0
Query:   20 CLGCRAWGHIVANCPE-AKAATGICFNCGSTKHALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWECP 112
            C  CR  GH +  C E  K   GICF CGS +H L  C  P   +G L +A                     +YPKGG C+ CG   HL  +CP
Sbjct:   59 CYFCRKPGHTIKKCTEKGKNKVGICFRCGSYEHKLSECQEPN--NGVLKYANXXXXXXXXXXXXXXXXXXXXIYPKGGGCRVCGENTHLMKDCP 150          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: U6KK74_EIMTE (Zinc finger (CCCH type) protein, putative (Fragment) n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6KK74_EIMTE)

HSP 1 Score: 60.5 bits (145), Expect = 3.990e-8
Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = 0
Query:   20 CLGCRAWGHIVANCPEAK--------------AATGICFNCGSTKHALRVCPAPKQKDGSLPHA 69
            CL CR  GH++  C EA               A++GICFNCGS +H L+ C  P+ KDGSLP A
Sbjct:   30 CLRCRKKGHLLHECREAAXXXXXXXXXDGDAAASSGICFNCGSKEHTLKNCKQPRNKDGSLPFA 93          
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Match: B6JY39_SCHJY (Zf-CCHC type zinc finger protein n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6JY39_SCHJY)

HSP 1 Score: 57.4 bits (137), Expect = 2.650e-6
Identity = 31/99 (31.31%), Postives = 41/99 (41.41%), Query Frame = 0
Query:   20 CLGCRAWGHIVANCPEAKAATGICFNCGSTKHALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKWCGSKHHLSWECPESTKVD 118
            C GCR  GHI+ +CPE+  +  I                   K G L  AT                N  G+YP+GG CK C S HH + +C + T+ D
Sbjct:   63 CFGCRKQGHILQDCPESGNSKAIXXXXXXXXXXXXX----XAKKGPLEFATXXXXXXXXXXXXXXXDNPKGLYPRGGGCKLCSSVHHFAKDCDKITRED 157          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1886.5949.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LFT4_ECTSI4.850e-14684.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A2H9TNT6_9FUNG3.910e-2245.83CCHC-type domain-containing protein n=1 Tax=Parami... [more]
A0A2A9MHL6_9APIC4.220e-2041.27Zinc knuckle domain-containing protein n=1 Tax=Bes... [more]
A0A0C2XNF4_9AGAM4.890e-2042.86Uncharacterized protein n=1 Tax=Serendipita vermif... [more]
A0A1Y2CGT7_9FUNG7.180e-1936.72Uncharacterized protein n=1 Tax=Rhizoclosmatium gl... [more]
A0A835ZFQ1_9STRA1.670e-1742.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI0006B0A7E62.830e-1036.73zinc finger CCHC domain-containing protein 9-like ... [more]
A0A2P6MPG5_9EUKA4.200e-936.17Zinc finger protein containing CCHC type domain n=... [more]
U6KK74_EIMTE3.990e-845.31Zinc finger (CCCH type) protein, putative (Fragmen... [more]
B6JY39_SCHJY2.650e-631.31Zf-CCHC type zinc finger protein n=1 Tax=Schizosac... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 19..35
e-value: 0.44
score: 13.4
coord: 70..86
e-value: 0.021
score: 21.5
coord: 97..113
e-value: 2.1
score: 9.2
coord: 42..58
e-value: 0.064
score: 18.6
NoneNo IPR availableGENE3D4.10.60.10coord: 64..115
e-value: 5.7E-8
score: 34.4
NoneNo IPR availableGENE3D4.10.60.10coord: 2..63
e-value: 2.4E-9
score: 38.7
IPR042246Zinc finger CCHC domain-containing protein 9PANTHERPTHR46242FAMILY NOT NAMEDcoord: 4..139
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 63..114
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 10..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1886contigEcto-sp13_S_contig1886:12345..14645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1886.5949.1mRNA_Ecto-sp13_S_contig1886.5949.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1886 11796..14645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1886.5949.1 ID=prot_Ecto-sp13_S_contig1886.5949.1|Name=mRNA_Ecto-sp13_S_contig1886.5949.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=272bp
AYEARQKQNQLGPGANKTRCLGCRAWGHIVANCPEAKAATGICFNCGSTK
HALRVCPAPKQKDGSLPHATCFVCKAKGHISAHCKQNANGVYPKGGFCKW
CGSKHHLSWECPESTKVDKKKLDKNVKKDDAVGTASADDVVPGPSDSGKD
RGPASKEARGGGGKAERSTGGGGAVNGGAEEGTPKRLRTIGSSGASSARG
SKRALASRIGGDDLEDDGYYDPEDVPDASFEPPDGTEEQLGSGSSGGVAH
QPSGKGGSSAKRKLSSKVVVF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR042246ZCCHC9
IPR036875Znf_CCHC_sf