prot_Ecto-sp13_S_contig1884.5938.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1884.5938.1
Unique Nameprot_Ecto-sp13_S_contig1884.5938.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length124
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1884.5938.1 vs. uniprot
Match: D7G417_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G417_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 9.690e-78
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0 
Query:   13 MSSPAYATIAETSGKINAVIGQPQSAEAAPLVAPPGAPTVGMWVEERYCGLTTWLITLVGGLPCSYFCPCDRRTVWVSGGVKYNEKGAVTDDYLFLNPCPPGSTCHPNPTA 123
            MS+ AYATI ETSGKINAVIGQPQSAEAAPLVAPPGAPTVGMWVEERYCGLTTWLITLVGGLPCSYFCPCDRRTVWVSGGVKYNEKGAVTDDYLFLNPCPPGSTCHPNPTA
Sbjct:    1 MSAAAYATIDETSGKINAVIGQPQSAEAAPLVAPPGAPTVGMWVEERYCGLTTWLITLVGGLPCSYFCPCDRRTVWVSGGVKYNEKGAVTDDYLFLNPCPPGSTCHPNPTA 111
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BLAST of mRNA_Ecto-sp13_S_contig1884.5938.1 vs. uniprot
Match: D8LMJ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMJ4_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 9.840e-44
Identity = 68/91 (74.73%), Postives = 75/91 (82.42%), Query Frame = 0 
Query:   22 AETSGKINAVIGQP--QSAEAAPLVAPPGAPTVGMWVEERYCGLTTWLITLVGGLPCSYFCPCDRRTVWVSGGVKYNEKGAVTDDYLFLNP 110
            AE      AV GQP  Q+AEAAP++A PGAPT GMWVEERYCGLTTWLIT+VG  PCSYFCPCDRRTVWV+GG KYNEKGA+ DD LF+NP
Sbjct:   18 AEAPPTAYAVTGQPVPQAAEAAPVMAAPGAPTTGMWVEERYCGLTTWLITVVGSFPCSYFCPCDRRTVWVAGGKKYNEKGAIVDDQLFVNP 108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1884.5938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G417_ECTSI9.690e-7897.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LMJ4_ECTSI9.840e-4474.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1884contigEcto-sp13_S_contig1884:11364..14101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1884.5938.1mRNA_Ecto-sp13_S_contig1884.5938.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1884 11364..14101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1884.5938.1 ID=prot_Ecto-sp13_S_contig1884.5938.1|Name=mRNA_Ecto-sp13_S_contig1884.5938.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=124bp
LSLRLQRTRPAIMSSPAYATIAETSGKINAVIGQPQSAEAAPLVAPPGAP
TVGMWVEERYCGLTTWLITLVGGLPCSYFCPCDRRTVWVSGGVKYNEKGA
VTDDYLFLNPCPPGSTCHPNPTA*
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