prot_Ecto-sp13_S_contig18817.5933.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18817.5933.1
Unique Nameprot_Ecto-sp13_S_contig18817.5933.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length209
Homology
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: D8LEC4_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC4_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 1.280e-130
Identity = 194/201 (96.52%), Postives = 195/201 (97.01%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRVAEYKMLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVT 201
            RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTP VRDKEGEEWKQYLQAAVLFLVLSPN NHQQDMLFRVAEYK LEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELL KWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVA  V+
Sbjct:  182 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPSVRDKEGEEWKQYLQAAVLFLVLSPNGNHQQDMLFRVAEYKKLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLAKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVADMVS 382          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: A0A7S2V6L0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6L0_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.040e-63
Identity = 112/202 (55.45%), Postives = 148/202 (73.27%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRVAEYKMLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLT-KWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVT 201
            RLTLAKKD+VRALIQSRKI+RKVL +EDMQDIK+ FY+LMIEY T+E+   +LC+ +HSI  TP V + + + WK+ L+A VLFLVLSP  N QQD+L +VA    LE+LP +K L  +FTT ++IGYP++ Q+ LE+ PCLA   P  L  KW + L+ R VQH+IR V+ YYK+I  +RLA+LLGLD  Q E  ++  V+
Sbjct:  180 RLTLAKKDYVRALIQSRKISRKVLEEEDMQDIKINFYRLMIEYHTYEEDPLELCRHYHSILHTPKVAEDDAQ-WKEALEATVLFLVLSPQTNTQQDLLQKVALDTRLEKLPNFKNLTTVFTTQQVIGYPLQGQQDLEAHPCLARHAPPTLPQKWAQQLRTRTVQHSIRVVSKYYKRIRMQRLAELLGLDVPQTESHLSTMVS 380          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: A0A835ZAZ9_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ9_9STRA)

HSP 1 Score: 206 bits (523), Expect = 5.170e-61
Identity = 112/215 (52.09%), Postives = 148/215 (68.84%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRVAEYKMLEELPAYKMLVKLFTTPEIIGYPVENQEALES---DPCLAAG-----GPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVTHAVTCA 207
            RLTL KKD+VRALIQSRKINRK++  +DMQ++KVRFY+LM++YD HEK  F LC D+H+I+ T +++  + ++ +  L++ V++LVLSP  N QQDML RV+ Y  L+EL +YK L+KLFTT EII YP+     LE+   +   A G     GP LL +W +DL  R+VQHNIR  A YYKQI T RLA LLGLDE   ER ++  V+     A
Sbjct:  182 RLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIK-ADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYA 395          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: A0A4D9CRV0_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRV0_9STRA)

HSP 1 Score: 181 bits (458), Expect = 2.170e-51
Identity = 97/212 (45.75%), Postives = 139/212 (65.57%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDED--MQDIKVRFYKLMIEYDT-HEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRVA--EYKMLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVTHAVTCA 207
            RLTLAKKDF+R  I ++K+ +K+L  ED  +Q +K++FY+LMIEY +  EK  F++ Q +HSIY+TP+VR +E E W+  L A VLFL+++P+ N Q DML R+   E   L +LP YK ++K +TT EII YP+     +ES P L   G EL   W + L+ R++QHNIR +++YYK+I   R ADLL LD ++ E  +A  V+     A
Sbjct:  184 RLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESE-WRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIRYPLPQLPDIESHPALTLYGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLTRAADLLSLDVSELENNIATLVSEGALYA 394          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: F0YET2_AURAN (PCI domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YET2_AURAN)

HSP 1 Score: 180 bits (456), Expect = 5.070e-51
Identity = 100/206 (48.54%), Postives = 134/206 (65.05%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRV----AEYKMLEELPAYKMLVKLFTTPEIIGYPV-ENQEALESDPCLAAGGPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVT 201
            RL LAK D VRA I S+K+ RK LL++D+QD+KVRFYKLM+EY   E   F+L QDF +I+ T  V D E   W+  L +  +FL LS +     DM+ RV    A    L+ LP  K L+ LFTT EII YP+ ++Q A+E  PCL   G ++  +WK+ L  R+VQHN+R VA YY+QI+  RLA+LLGL E++AER V+  V+
Sbjct:  189 RLMLAKGDRVRAYILSKKVQRKTLLEDDLQDLKVRFYKLMVEYHVLEDEPFELAQDFFAIFSTKCVLDDEAA-WRDALSSTAIFLALSDHAPGVSDMMHRVLADAAAAPKLDALPTSKALLALFTTDEIIAYPMPDHQAAVEDHPCLKTAGDDVHLRWKKTLHTRVVQHNVRVVAKYYRQISVARLANLLGLSEDEAERHVSHMVS 393          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: A0A7S2RAT1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAT1_9STRA)

HSP 1 Score: 179 bits (455), Expect = 1.050e-50
Identity = 90/210 (42.86%), Postives = 139/210 (66.19%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGE---EWKQYLQAAVLFLVLSPNDNHQQDMLFRVAEYKMLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVTHAVTCA 207
            R+T+AK+D+VR LI ++K+ +K++ + D+QD+K+R+++LM EY  HEK  F+L Q F+S+YDTP + + + +    WK +L++ +LFL L+P  NHQ DML R+A  + LE+L  +  +VKLFTT EII +P+  Q  +E       G PEL   W++    R  QHN+R VA YYK+I   RLA+LLGL  ++AE++++  V+     A
Sbjct:  214 RMTIAKQDWVRVLIVAKKVQKKIIDEPDLQDLKMRYHRLMTEYYLHEKDAFELAQSFYSLYDTPCIAEDDSDLVSGWKHHLKSCILFLCLAPQTNHQADMLHRIAAIEKLEQLDEWHGVVKLFTTDEIITFPLPQQPVVEQ-LLKEVGTPELFPYWQQQTHERTTQHNMRVVAKYYKRIRMVRLAELLGLTVDEAEKQLSALVSQGALYA 422          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: B7FQA9_PHATC (Regulatory proteasome non-atpase subunit 5 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQA9_PHATC)

HSP 1 Score: 179 bits (454), Expect = 1.060e-50
Identity = 97/202 (48.02%), Postives = 133/202 (65.84%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRVAEYKMLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVTH 202
            RLTLAKKDFVRA I + K+++K L +E+M+  KV+FY LM  Y  H+K   DL +D+H+IY TP +   +G +W++ LQA V+FL LSP DN QQDML R+A  + LE+LPA K  + L    EII YP+ +Q  LE+ P    GG +L   W E    RI+QHNIR V+ YYK+I+  RLA LL L+  + E+++A  V+ 
Sbjct:  202 RLTLAKKDFVRAAIVAGKVSKKNLAEENMKTYKVQFYTLMTIYHRHDKNALDLARDYHAIYLTPHIL-ADGVKWREALQATVVFLALSPYDNEQQDMLNRIALEENLEKLPACKKTIDLLLKKEIINYPMTHQAELEALPVCHEGGEDLAAHWHEVFHRRIIQHNIRVVSVYYKRIHGARLAQLLQLEPARVEKEIASMVSE 402          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: A0A7S4EB77_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EB77_9STRA)

HSP 1 Score: 172 bits (437), Expect = 8.820e-50
Identity = 97/209 (46.41%), Postives = 135/209 (64.59%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRV----AEYKMLEELPAYKMLVKLFTTPEIIGYPV--ENQEALESDPCLAAGGPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVTHA 203
            RL LAK D VRA I S+K+ RK L ++D+QD+KVRFYKLM EY   E A FDL Q+F +I++T  V+D E   W+  L +  LFL LS +     DM+ RV         LE+LP  K L+ LFTT EI+ YP+  E+Q A+E+ P L   G E+  +WK  L+ R++QHNIR V+ YY+Q++  RLA+LLGL  ++AE+ V+  V+ +
Sbjct:   35 RLMLAKGDRVRAYILSKKVQRKTLEEDDLQDLKVRFYKLMSEYHVLEDAPFDLAQNFWAIFNTKTVQDDEAS-WRDALSSTALFLALSQHAPGVSDMMHRVLADATAAPKLEKLPTAKHLLTLFTTQEIVAYPLTEEHQRAVEAHPALHTAGAEIHQRWKNTLRERVIQHNIRVVSGYYRQLSMARLANLLGLSVDEAEKHVSDMVSDS 242          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: A0A7S4A230_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A230_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.220e-48
Identity = 97/209 (46.41%), Postives = 135/209 (64.59%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRV----AEYKMLEELPAYKMLVKLFTTPEIIGYPV--ENQEALESDPCLAAGGPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVTHA 203
            RL LAK D VRA I S+K+ RK L ++D+QD+KVRFYKLM EY   E A FDL Q+F +I++T  V+D E   W+  L +  LFL LS +     DM+ RV         LE+LP  K L+ LFTT EI+ YP+  E+Q A+E+ P L   G E+  +WK  L+ R++QHNIR V+ YY+Q++  RLA+LLGL  ++AE+ V+  V+ +
Sbjct:  188 RLMLAKGDRVRAYILSKKVQRKTLEEDDLQDLKVRFYKLMSEYHVLEDAPFDLAQNFWAIFNTKTVQDDEAS-WRDALSSTALFLALSQHAPGVSDMMHRVLADATAAPKLEKLPTAKHLLTLFTTQEIVAYPLTEEHQRAVEAHPALHTAGAEIHQRWKNTLRERVIQHNIRVVSGYYRQLSMARLANLLGLSVDEAEKHVSDMVSDS 395          
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Match: A0A7S1ZZ80_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ80_TRICV)

HSP 1 Score: 172 bits (436), Expect = 7.330e-48
Identity = 92/201 (45.77%), Postives = 127/201 (63.18%), Query Frame = 0
Query:    1 RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFRVAEYKMLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELLTKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTVT 201
            RLTL KKD++RA I + KINRK + +E M+  K++F+ LM EY  HEK   +L +D+HSIY T  V+  E + WK  LQ+ VLFL LS   N QQDML R+     LE++ + K  VKL    EII YP+ +Q  LE+ P    GGP+L   W +    RIVQHN+R  A YY++I+ +RLA LLGL+  + E +++  V+
Sbjct:  225 RLTLGKKDYIRAAIVAGKINRKAVSEEGMEGEKIKFFTLMTEYHRHEKDAIELAKDYHSIYSTSSVQANEAD-WKDALQSTVLFLALSQYSNEQQDMLNRINLDPNLEKIESCKETVKLLLKKEIIHYPLPHQAELEAMPSFTVGGPDLTAHWHKIFHTRIVQHNVRVAALYYRRIHGRRLAQLLGLEPAELEAEISNMVS 424          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18817.5933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEC4_ECTSI1.280e-13096.52PCI domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2V6L0_9STRA1.040e-6355.45Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZAZ9_9STRA5.170e-6152.09PCI domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9CRV0_9STRA2.170e-5145.75PCI domain-containing protein n=2 Tax=Monodopsidac... [more]
F0YET2_AURAN5.070e-5148.54PCI domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S2RAT1_9STRA1.050e-5042.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
B7FQA9_PHATC1.060e-5048.02Regulatory proteasome non-atpase subunit 5 n=3 Tax... [more]
A0A7S4EB77_9STRA8.820e-5046.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4A230_9STRA3.220e-4846.41Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1ZZ80_TRICV7.330e-4845.77Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000717Proteasome component (PCI) domainPFAMPF01399PCIcoord: 111..198
e-value: 1.0E-8
score: 35.6
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 151..203
e-value: 1.1E-7
score: 33.4
IPR04013426S Proteasome non-ATPase regulatory subunit 12/COP9 signalosome complex subunit 4PANTHERPTHR1085526S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4coord: 1..202
IPR03529726S Proteasome non-ATPase regulatory subunit 12PANTHERPTHR10855:SF126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12coord: 1..202
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 150..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18817contigEcto-sp13_S_contig18817:3..2401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18817.5933.1mRNA_Ecto-sp13_S_contig18817.5933.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18817 3..2401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18817.5933.1 ID=prot_Ecto-sp13_S_contig18817.5933.1|Name=mRNA_Ecto-sp13_S_contig18817.5933.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
RLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKAT
FDLCQDFHSIYDTPLVRDKEGEEWKQYLQAAVLFLVLSPNDNHQQDMLFR
VAEYKMLEELPAYKMLVKLFTTPEIIGYPVENQEALESDPCLAAGGPELL
TKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVAGTV
THAVTCAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
IPR036388WH-like_DNA-bd_sf
IPR040134PSMD12/CSN4
IPR035297PSMD12
IPR036390WH_DNA-bd_sf