prot_Ecto-sp13_S_contig18772.5911.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18772.5911.1
Unique Nameprot_Ecto-sp13_S_contig18772.5911.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length96
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18772.5911.1 vs. uniprot
Match: D7FV49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV49_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 6.860e-45
Identity = 83/99 (83.84%), Postives = 87/99 (87.88%), Query Frame = 0 
Query:    1 AEVPQGDDVLPLLRGLSDAWIDAEACALNN---AAADDMHRRGVVVGAGNTGPPRVVRLCAFNFSAVGMPLDTAAGSELQALEVARCLEGVVTALHKIQ 96
            AEVPQGDDVLPLLR LSDAW+DAEACAL N   A  D+MHRRG VVGAGN GPPRVVRLCAFNFS VGMPLDTA GSELQALEV RCL+GVVTALHKI+
Sbjct: 1423 AEVPQGDDVLPLLRDLSDAWMDAEACALKNTDDADDDEMHRRGAVVGAGNAGPPRVVRLCAFNFSTVGMPLDTATGSELQALEVVRCLQGVVTALHKIE 1521
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BLAST of mRNA_Ecto-sp13_S_contig18772.5911.1 vs. uniprot
Match: A0A6H5JD11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD11_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 9.380e-45
Identity = 84/101 (83.17%), Postives = 87/101 (86.14%), Query Frame = 0 
Query:    1 AEVPQGDDVLPLLRGLSDAWIDAEACALNNA-----AADDMHRRGVVVGAGNTGPPRVVRLCAFNFSAVGMPLDTAAGSELQALEVARCLEGVVTALHKIQ 96
            A+VPQGDDVL LLR LSDAWIDAEACAL NA      AD+MHRRG VVGAGN GPPRVVRLCAFNFS VGMPLDTAAGSEL ALEV RCL+GVVTALHKIQ
Sbjct: 1934 ADVPQGDDVLQLLRDLSDAWIDAEACALKNADAAAATADEMHRRGAVVGAGNAGPPRVVRLCAFNFSTVGMPLDTAAGSELHALEVVRCLKGVVTALHKIQ 2034
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18772.5911.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FV49_ECTSI6.860e-4583.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JD11_9PHAE9.380e-4583.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18772contigEcto-sp13_S_contig18772:1962..3264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18772.5911.1mRNA_Ecto-sp13_S_contig18772.5911.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18772 1962..3264 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18772.5911.1 ID=prot_Ecto-sp13_S_contig18772.5911.1|Name=mRNA_Ecto-sp13_S_contig18772.5911.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
AEVPQGDDVLPLLRGLSDAWIDAEACALNNAAADDMHRRGVVVGAGNTGP
PRVVRLCAFNFSAVGMPLDTAAGSELQALEVARCLEGVVTALHKIQ
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