prot_Ecto-sp13_S_contig1875.5902.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig1875.5902.1
Unique Name	prot_Ecto-sp13_S_contig1875.5902.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	86

Homology

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: D7FX60_ECTSI (WD40 repeat-containing protein SMU1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX60_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.160e-44
Identity = 74/84 (88.10%), Postives = 79/84 (94.05%), Query Frame = 0

Query:    2 QILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 85
            Q++    + +S+RADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS
Sbjct:  433 QVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 516

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: A0A7S3XY04_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XY04_HETAK)

HSP 1 Score: 115 bits (288), Expect = 2.330e-31
Identity = 48/84 (57.14%), Postives = 71/84 (84.52%), Query Frame = 0

Query:    2 QILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 85
            Q+++  ++ +++  DF  A +SP+G+WVYCAGEDG L+CF+ AT ++++ LKV++KE+IGLAHHPHRNL+ATFS+EG LKLWK+
Sbjct:   48 QVVKTFSSGKAVGGDFAAAAVSPQGKWVYCAGEDGVLYCFNVATGQLDQVLKVADKEVIGLAHHPHRNLVATFSDEGALKLWKA 131

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: UPI00072E552E (WD40 repeat-containing protein SMU1-like n=1 Tax=Poecilia latipinna TaxID=48699 RepID=UPI00072E552E)

HSP 1 Score: 108 bits (271), Expect = 3.170e-29
Identity = 45/84 (53.57%), Postives = 61/84 (72.62%), Query Frame = 0

Query:    1 PQILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 84
            PQ ++   +EQ  RA F C  +SP G W+YC GED  L+CF+  T  +EKTL V +K++IG+AHHPH NL+AT+S +GLL+LWK
Sbjct:   11 PQTVKTFCSEQPERAGFVCCAVSPHGEWIYCVGEDSVLYCFNYTTGRLEKTLTVHDKDVIGIAHHPHENLIATYSEDGLLRLWK 94

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: A0A2G9NCG6_LITCT (Smu-1 suppressor of mec-8 and unc-52 protein homolog n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9NCG6_LITCT)

HSP 1 Score: 104 bits (259), Expect = 1.700e-27
Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 0

Query:    2 QILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 84
            QI+   ++ +    DF C  LSP+G W+YC GED  L+CF   T ++E+TL V EK++IG+AHHPH+NL+ T+S +GLLKLWK
Sbjct:    4 QIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWK 86

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: UPI0012ED6B31 (WD40 repeat-containing protein SMU1-like n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012ED6B31)

HSP 1 Score: 107 bits (266), Expect = 1.960e-27
Identity = 44/83 (53.01%), Postives = 62/83 (74.70%), Query Frame = 0

Query:    2 QILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 84
            Q ++   +E+  +ADF C  LSP+G W+YC GED  L+CF+  T  ++KTL V EK++IG+AHHPH NL+AT+S +GLL+LWK
Sbjct:   97 QTVKTFCSERKEKADFVCCTLSPRGEWIYCVGEDLVLYCFNYTTGRLQKTLTVHEKDVIGIAHHPHENLIATYSEDGLLRLWK 179

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: E4Z029_OIKDI (Smu-1 suppressor of mec-8 and unc-52 protein homolog (Fragment) n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4Z029_OIKDI)

HSP 1 Score: 103 bits (257), Expect = 3.620e-27
Identity = 43/82 (52.44%), Postives = 59/82 (71.95%), Query Frame = 0

Query:    3 ILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 84
            +L  C   +    DF C+ LSP+G W+YC GED  L+CF   + ++E+TL V EK++IG++HHPH NL+ATFS +GLLKLWK
Sbjct:    7 LLSFCFQGKKQGGDFVCSTLSPRGEWLYCIGEDRVLYCFSTHSGKLERTLIVHEKDVIGISHHPHSNLIATFSEDGLLKLWK 88

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: UPI000549DDA6 (WD40 repeat-containing protein SMU1 n=1 Tax=Meleagris gallopavo TaxID=9103 RepID=UPI000549DDA6)

HSP 1 Score: 106 bits (264), Expect = 4.700e-27
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 0

Query:    2 QILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 84
            QI+   ++ +    DF C  LSP+G W+YC GED  L+CF   T ++E+TL V EK++IG+AHHPH+NL+AT+S +GLLKLWK
Sbjct:  104 QIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWK 186

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: A0A4Z2E2F5_9TELE (Smu-1 suppressor of mec-8 and unc-52 protein homolog n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A4Z2E2F5_9TELE)

HSP 1 Score: 104 bits (260), Expect = 5.240e-27
Identity = 43/83 (51.81%), Postives = 61/83 (73.49%), Query Frame = 0

Query:    2 QILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 84
            QI+   ++ +    DF C  LSP+G W+YC GED  L+CF   T ++E+TL V EK++IG+AHHPH+NL++T+S +GLLKLWK
Sbjct:   56 QIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLISTYSEDGLLKLWK 138

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: A0A212CMV6_CEREH (WD40 repeat-containing protein SMU1 n=1 Tax=Cervus elaphus hippelaphus TaxID=46360 RepID=A0A212CMV6_CEREH)

HSP 1 Score: 106 bits (264), Expect = 1.110e-26
Identity = 44/83 (53.01%), Postives = 61/83 (73.49%), Query Frame = 0

Query:    2 QILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWK 84
            QI+   ++ +    DF C  LSP+G W+YC GED  L+CF   T ++E+TL V EK++IG+AHHPH+NL+AT+S +GLLKLWK
Sbjct:  139 QIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWK 221

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BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Match: UPI001BB230D8 (WD40 repeat-containing protein SMU1-like isoform X1 n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB230D8)

HSP 1 Score: 108 bits (269), Expect = 1.590e-26
Identity = 46/84 (54.76%), Postives = 63/84 (75.00%), Query Frame = 0

Query:    2 QILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 85
            QI+   ++ +    DFTC+CLSP+G W+YC GED  L+CF  +T ++E+TL V EK++IG+  HPH NLLAT+S +GLLKLWKS
Sbjct:  243 QIVRSFSSGKREGGDFTCSCLSPRGEWIYCIGEDLVLYCFSTSTGKLERTLTVHEKDVIGIVPHPHNNLLATYSEDGLLKLWKS 326

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig1875.5902.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FX60_ECTSI	1.160e-44	88.10	WD40 repeat-containing protein SMU1 n=2 Tax=Ectoca...	[more]
A0A7S3XY04_HETAK	2.330e-31	57.14	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
UPI00072E552E	3.170e-29	53.57	WD40 repeat-containing protein SMU1-like n=1 Tax=P...	[more]
A0A2G9NCG6_LITCT	1.700e-27	51.81	Smu-1 suppressor of mec-8 and unc-52 protein homol...	[more]
UPI0012ED6B31	1.960e-27	53.01	WD40 repeat-containing protein SMU1-like n=1 Tax=A...	[more]
E4Z029_OIKDI	3.620e-27	52.44	Smu-1 suppressor of mec-8 and unc-52 protein homol...	[more]
UPI000549DDA6	4.700e-27	53.01	WD40 repeat-containing protein SMU1 n=1 Tax=Meleag...	[more]
A0A4Z2E2F5_9TELE	5.240e-27	51.81	Smu-1 suppressor of mec-8 and unc-52 protein homol...	[more]
A0A212CMV6_CEREH	1.110e-26	53.01	WD40 repeat-containing protein SMU1 n=1 Tax=Cervus...	[more]
UPI001BB230D8	1.590e-26	54.76	WD40 repeat-containing protein SMU1-like isoform X...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 4..42 e-value: 1.6 score: 15.7 coord: 45..84 e-value: 0.24 score: 20.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 52..85 score: 8.57
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 4..85 e-value: 1.5E-12 score: 49.0
None	No IPR available	PANTHER	PTHR22848:SF2	WD40 REPEAT-CONTAINING PROTEIN SMU1	coord: 2..84
None	No IPR available	PANTHER	PTHR22848	WD40 REPEAT PROTEIN	coord: 2..84
IPR017986	WD40-repeat-containing domain	PROSITE	PS50294	WD_REPEATS_REGION	coord: 10..85 score: 10.865
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	SUPERFAMILY	50998	Quinoprotein alcohol dehydrogenase-like	coord: 15..84

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig1875	contig	Ecto-sp13_S_contig1875:11271..11858 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig1875.5902.1	mRNA_Ecto-sp13_S_contig1875.5902.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig1875 11271..11858 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig1875.5902.1 ID=prot_Ecto-sp13_S_contig1875.5902.1|Name=mRNA_Ecto-sp13_S_contig1875.5902.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
PQILEHCAAEQSMRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEK
TLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom
IPR011047	Quinoprotein_ADH-like_supfam