prot_Ecto-sp13_S_contig1875.5901.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1875.5901.1
Unique Nameprot_Ecto-sp13_S_contig1875.5901.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length332
Homology
BLAST of mRNA_Ecto-sp13_S_contig1875.5901.1 vs. uniprot
Match: D7FX59_ECTSI (SET translocation n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX59_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 6.500e-105
Identity = 198/225 (88.00%), Postives = 201/225 (89.33%), Query Frame = 0
Query:  107 LTQPYISDGDQLALSYLEAVAVHKATSTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESVGGEGEKLDDDDDVGFRVTFTFRENPFFSNSELWREWEPADEKAAFSAVKWKDTDESRDLQSCLLWNLDPALQEETPSFFSIFGDDMEDYELGEALRGDITDNPLDIYMRHDFDAEAPEEEEEGGAAAQPEGEEEGGEYDGGVNQIGVGLEEGGGETIVDEG 331
            L  PYISDGDQLALSYLEAVAVHKAT TAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GGEG KLDDDDDVGFRVTFTFRENPFFSNSELWREWEPADEKA+FS V WKDTDESRDLQSCLLWNLDPAL EETPSFFSIFGDDMEDYELGEALRGDITDNPLDIYMRHDFDAEA E        AQPEG+ EGGEYD GVNQIG GLEEGGG+TIVDEG
Sbjct:   90 LKVPYISDGDQLALSYLEAVAVHKATPTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGEGGKLDDDDDVGFRVTFTFRENPFFSNSELWREWEPADEKASFSVVNWKDTDESRDLQSCLLWNLDPALHEETPSFFSIFGDDMEDYELGEALRGDITDNPLDIYMRHDFDAEASEXXXXXXXXAQPEGDGEGGEYDSGVNQIGGGLEEGGGDTIVDEG 314          
BLAST of mRNA_Ecto-sp13_S_contig1875.5901.1 vs. uniprot
Match: A0A2K6SAC3_SAIBB (Uncharacterized protein n=5 Tax=Platyrrhini TaxID=9479 RepID=A0A2K6SAC3_SAIBB)

HSP 1 Score: 57.0 bits (136), Expect = 1.260e-5
Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 0
Query:  170 VGGEGEKLDDDDDVGFRVTFTFRENPFFSNSELWREW---EPADEKAAFSAVKWKDTDESRDLQSCLLWNLDPALQ----EETPSFFSIFGD--DMEDYELGEALRGDITDNPLDIYMRHDFDAEAPEEEEE 292
            +G E  + +D    G+++ F F ENP+F N  + RE+   E  D  +  + +KWK     +DL        + A++    EE  SFF+ F D  D    +LGE ++ DI  NPL  Y+  D D E   E EE
Sbjct:  115 IGVEVTEFEDIIKSGYKIDFHFDENPYFENKVISREFHLNESGDPSSTSTEIKWKS---GKDLTKRSSQRQNIAIRKRKHEEPESFFTWFKDHSDAGADDLGEVIKDDIWQNPLQYYLVPDMDDEEEGEGEE 243          
BLAST of mRNA_Ecto-sp13_S_contig1875.5901.1 vs. uniprot
Match: A0A553P9C0_9TELE (Uncharacterized protein (Fragment) n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553P9C0_9TELE)

HSP 1 Score: 57.0 bits (136), Expect = 2.720e-5
Identity = 44/119 (36.97%), Postives = 59/119 (49.58%), Query Frame = 0
Query:  184 GFRVTFTFRENPFFSNSELWREW---EPADEKAAFSAVKWKD----TDESRDLQSCLLWNLDPALQEETP-SFFSIFGD--DMEDYELGEALRGDITDNPLDIYMRHDFDAEAPEEEEE 292
            G+R+ F+F ENP+F N  L +E+   E  D  +  + +KWK     T  S   QS          Q E P SFF+ F D  D    ELGE ++ DI  NPL  Y+  D D E  + EE+
Sbjct:  153 GYRIDFSFGENPYFENKALSKEFHLNESGDPSSKSTEIKWKAGKDLTKRSGQTQS----KAGKKRQHEEPESFFTWFTDLSDAGADELGEVIKDDIWPNPLQYYLVPDMDEEEGDGEED 267          
BLAST of mRNA_Ecto-sp13_S_contig1875.5901.1 vs. uniprot
Match: A0A6V7U030_9BILA (Hypothetical protein n=2 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7U030_9BILA)

HSP 1 Score: 55.1 bits (131), Expect = 3.950e-5
Identity = 40/131 (30.53%), Postives = 67/131 (51.15%), Query Frame = 0
Query:  183 VGFRVTFTFRENPFFSNSELWRE--WEPADEKAAFSAVKWKDTDESRDLQSCLLWNLDPALQEETPSFFSIF---GDDMEDYELGEALRGDITDNPLDIYMRHDFDA---EAPEEEEEGGAAAQPEGEEEG 305
             G+++ FTF  NP+F N+E+++E  W  AD + + + ++WK   + +      L N       E  SFF       D M D ++ E ++ DI  NPL  Y+  + +A   E  EE+++GG   +  G E+G
Sbjct:  112 AGYKIKFTFDVNPYFENTEIFKEYNWSGADPRCSSTPIQWKPGKQKQ------LMNGAGKNGAENRSFFKWLCEESDPMAD-DIAEVIKDDIWPNPLQYYLAPEVEAADEEGCEEDDDGGLTEEYGGYEDG 235          
BLAST of mRNA_Ecto-sp13_S_contig1875.5901.1 vs. uniprot
Match: A0A2K6TE66_SAIBB (Uncharacterized protein n=2 Tax=Saimiri boliviensis boliviensis TaxID=39432 RepID=A0A2K6TE66_SAIBB)

HSP 1 Score: 54.3 bits (129), Expect = 8.730e-5
Identity = 37/104 (35.58%), Postives = 52/104 (50.00%), Query Frame = 0
Query:  184 GFRVTFTFRENPFFSNSELWREW---EPADEKAAFSAVKWKDTDESRDLQSCLLWNLDPALQ----EETPSFFSIFGD--DMEDYELGEALRGDITDNPLDIYM 278
            G+R+ F F ENP+F N  L +E+   E  D  +  + +KWK     +DL  C     + A +    EE  S F+ F D  D    ELGE ++ DI  NPL  Y+
Sbjct:  144 GYRIDFYFDENPYFENKVLSKEFHLNESGDTSSKSTEIKWKS---GKDLTKCSSQTQNKASRKRQHEEPESSFTWFADHSDAGADELGEVVKDDIWQNPLQYYL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1875.5901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FX59_ECTSI6.500e-10588.00SET translocation n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A2K6SAC3_SAIBB1.260e-533.33Uncharacterized protein n=5 Tax=Platyrrhini TaxID=... [more]
A0A553P9C0_9TELE2.720e-536.97Uncharacterized protein (Fragment) n=1 Tax=Danione... [more]
A0A6V7U030_9BILA3.950e-530.53Hypothetical protein n=2 Tax=Meloidogyne enterolob... [more]
A0A2K6TE66_SAIBB8.730e-535.58Uncharacterized protein n=2 Tax=Saimiri boliviensi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1120.90coord: 170..282
e-value: 4.4E-13
score: 51.3
NoneNo IPR availablePANTHERPTHR11875:SF49PROTEIN SETcoord: 102..306
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..331
IPR002164Nucleosome assembly protein (NAP)PANTHERPTHR11875TESTIS-SPECIFIC Y-ENCODED PROTEINcoord: 102..306
IPR037231NAP-like superfamilySUPERFAMILY143113NAP-likecoord: 102..277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1875contigEcto-sp13_S_contig1875:5330..9143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1875.5901.1mRNA_Ecto-sp13_S_contig1875.5901.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1875 5276..10527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1875.5901.1 ID=prot_Ecto-sp13_S_contig1875.5901.1|Name=mRNA_Ecto-sp13_S_contig1875.5901.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=332bp
MHLKLLETCTAVLQLLPLRLTGVRWGAGFVLLFVVTRLIFERGEERYVAA
QRSGESCSFSCCPLSHPIHTICPPNTTIPIRSPLFVYTLSSFLLSPRPTP
KLLAHPLTQPYISDGDQLALSYLEAVAVHKATSTAAAVAASGAAAGAADG
DKGRTSGASEEEKEEVSESVGGEGEKLDDDDDVGFRVTFTFRENPFFSNS
ELWREWEPADEKAAFSAVKWKDTDESRDLQSCLLWNLDPALQEETPSFFS
IFGDDMEDYELGEALRGDITDNPLDIYMRHDFDAEAPEEEEEGGAAAQPE
GEEEGGEYDGGVNQIGVGLEEGGGETIVDEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002164NAP_family
IPR037231NAP-like_sf