prot_Ecto-sp13_S_contig18736.5897.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18736.5897.1
Unique Nameprot_Ecto-sp13_S_contig18736.5897.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length301
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18736.5897.1 vs. uniprot
Match: D8LDZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ5_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 1.110e-186
Identity = 276/294 (93.88%), Postives = 282/294 (95.92%), Query Frame = 0 
Query:    1 RYSGLTDDRSACVFASEVAFLLKKERVDGGRHPASFRFSFVLPENLTPTFRGVGVRYAYAVTVRVRRALPPPPAAGRLLGLVRRRPAAGSSASAGFSTTDVHVPFTVLSRGPPAFDGVGGTADGIGDGGVCGRVAFAELEAERQSGDAFEMEAVRAKAGGLVSGTRAVTWNMQGRMIDDGYGSIGASALLLGEGDGGAXXXXXXXMVYSIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVCACLEVCEENQNAFPRDAASSAPGRPKPQPDVRSTCHKRVVDSCK 294
            RYSGLTDDRSACVFASEVA LLKKERVDGGRHPASFRFSFVLPENLTPTFRGVGVRYAYAVTVRVRRALPPPPAAGRLLGLVRRRPAAGSSASAGFSTTDVHV FTVLSRGPPAFDGVGGTADGIGDGG  GRVAFAELEAERQS DAFE+EA RAKAGGLVSGTRAVTWNMQGRMIDDG+GSIGASALLLGEGDGGA  XXXXXMVYSIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVCACLEVCEENQNAF  D+ASSAPG+PKP P+ R+TCHKRVVDSCK
Sbjct:  121 RYSGLTDDRSACVFASEVAVLLKKERVDGGRHPASFRFSFVLPENLTPTFRGVGVRYAYAVTVRVRRALPPPPAAGRLLGLVRRRPAAGSSASAGFSTTDVHVSFTVLSRGPPAFDGVGGTADGIGDGGGWGRVAFAELEAERQSADAFEVEADRAKAGGLVSGTRAVTWNMQGRMIDDGFGSIGASALLLGEGDGGAEDXXXXXMVYSIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVCACLEVCEENQNAFTGDSASSAPGKPKPSPNARNTCHKRVVDSCK 414
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18736.5897.1 vs. uniprot
Match: A0A6H5KF53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF53_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 4.310e-89
Identity = 149/173 (86.13%), Postives = 151/173 (87.28%), Query Frame = 0 
Query:    1 RYSGLTDDRSACVFASEVAFLLKKERVDGGRHPASFRFSFVLPENLTPTFRGVGVRYAYAVTVRVRRALPPPPAAGRLLGLVRRRPAAGSSASAGFSTTDVHVPFTVLSRGPPAFDGVGGTADGIGDGGVCGRVAFAELEAERQSGDAFEMEAVRAKAGGLVSGTRAVTWNMQ 173
            RYSGLTDDRSACVFASEVA LLK+ERVDGGRHP SFRFSFVLPENLTPTFRGVGVRYAYAVTVRVRR+LPPPPAAGRLLGLVRRRPAAGSSASAGFSTTDVHV FT             GTADGIGDG   GRVAF ELEAERQSGDAFEMEA RAK GGLVSGTRAVTWNMQ
Sbjct:  118 RYSGLTDDRSACVFASEVAVLLKQERVDGGRHPTSFRFSFVLPENLTPTFRGVGVRYAYAVTVRVRRSLPPPPAAGRLLGLVRRRPAAGSSASAGFSTTDVHVSFT-------------GTADGIGDGVSWGRVAFTELEAERQSGDAFEMEADRAKGGGLVSGTRAVTWNMQ 277
[Close]
BLAST of mRNA_Ecto-sp13_S_contig18736.5897.1 vs. uniprot
Match: A0A6H5L4W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4W5_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 8.430e-70
Identity = 119/138 (86.23%), Postives = 125/138 (90.58%), Query Frame = 0 
Query:  157 KAGGLVSGTRAVTWNMQGRMIDDGYGSIGASALLLGEGDGGAXXXXXXXMVYSIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVCACLEVCEENQNAFPRDAASSAPGRPKPQPDVRSTCHKRVVDSCK 294
            +AG   S  R     ++GRMIDDG+GS+GASALLLGEGDGGA XXXXXXMV+SIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVCACLEVCEENQNAFP DAASSAPGRPKP PDVRSTCHKRVVDSCK
Sbjct:   13 RAGAGRSPPRHDIRKIKGRMIDDGFGSMGASALLLGEGDGGAGXXXXXXMVFSIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVCACLEVCEENQNAFPGDAASSAPGRPKPPPDVRSTCHKRVVDSCK 150
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18736.5897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDZ5_ECTSI1.110e-18693.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF53_9PHAE4.310e-8986.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4W5_9PHAE8.430e-7086.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014848Reduced growth phenotype protein 1PANTHERPTHR12507REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATEDcoord: 205..293
coord: 34..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18736contigEcto-sp13_S_contig18736:515..3138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18736.5897.1mRNA_Ecto-sp13_S_contig18736.5897.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18736 515..3138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18736.5897.1 ID=prot_Ecto-sp13_S_contig18736.5897.1|Name=mRNA_Ecto-sp13_S_contig18736.5897.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=301bp
RYSGLTDDRSACVFASEVAFLLKKERVDGGRHPASFRFSFVLPENLTPTF
RGVGVRYAYAVTVRVRRALPPPPAAGRLLGLVRRRPAAGSSASAGFSTTD
VHVPFTVLSRGPPAFDGVGGTADGIGDGGVCGRVAFAELEAERQSGDAFE
MEAVRAKAGGLVSGTRAVTWNMQGRMIDDGYGSIGASALLLGEGDGGAAD
PPPPPMVYSIRSGDHRIGSFILHKAEFCAGDIVLGNFDFSGASTRCLQVC
ACLEVCEENQNAFPRDAASSAPGRPKPQPDVRSTCHKRVVDSCKVCSCWA
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014848Rgp1