prot_Ecto-sp13_S_contig18682.5871.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18682.5871.1
Unique Nameprot_Ecto-sp13_S_contig18682.5871.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length47
Homology
BLAST of mRNA_Ecto-sp13_S_contig18682.5871.1 vs. uniprot
Match: D8LSK3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK3_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.280e-23
Identity = 44/46 (95.65%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 MLFEAAAGTKSNYFGGYIETIETPDYVDPEADIMFKINKFFGRGKK 46
            MLFEAA GTKSNYFGGYIETIETPDYVDPEADIMFKINK FGRGKK
Sbjct:  164 MLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFGRGKK 209          
BLAST of mRNA_Ecto-sp13_S_contig18682.5871.1 vs. uniprot
Match: A0A835YZY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZY5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 2.290e-12
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    1 MLFEAAAGTKSNYFGGYIETIETPDYVDPEADIMFKINKFFGRGKK 46
            +LFE AAGTK N+FGGY+ETIE  DYVD +AD+M K+   F  GKK
Sbjct:  157 LLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKLANMFSFGKK 202          
BLAST of mRNA_Ecto-sp13_S_contig18682.5871.1 vs. uniprot
Match: A0A835YSA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 5.380e-10
Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 MLFEAAAGTKSNYFGGYIETIETPDYVDPEADIMFKI 37
            +LFE AAGTK N+FGGY+ETIE  DYVD +AD+M K+
Sbjct:  112 LLFEKAAGTKKNFFGGYVETIEVKDYVDEDADVMGKL 148          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18682.5871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSK3_ECTSI1.280e-2395.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZY5_9STRA2.290e-1263.04Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835YSA5_9STRA5.380e-1067.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18682contigEcto-sp13_S_contig18682:556..696 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18682.5871.1mRNA_Ecto-sp13_S_contig18682.5871.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18682 550..1036 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18682.5871.1 ID=prot_Ecto-sp13_S_contig18682.5871.1|Name=mRNA_Ecto-sp13_S_contig18682.5871.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=47bp
MLFEAAAGTKSNYFGGYIETIETPDYVDPEADIMFKINKFFGRGKK*
back to top