prot_Ecto-sp13_S_contig1866.5856.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1866.5856.1
Unique Nameprot_Ecto-sp13_S_contig1866.5856.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length324
Homology
BLAST of mRNA_Ecto-sp13_S_contig1866.5856.1 vs. uniprot
Match: A0A6H5JPG3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPG3_9PHAE)

HSP 1 Score: 597 bits (1540), Expect = 4.540e-208
Identity = 293/323 (90.71%), Postives = 300/323 (92.88%), Query Frame = 0
Query:    1 MGCTVPRRTFVAILALTALAAAQEEPMRLGSRECPLDISVLWTVEVGSPVYSTPVILPSSAGGQKQIVLATLRNVELIDGDGSVPYPWPIEMDDHENSAFLASPALHDVDGDGVQDICVADTMGWMRWLTPGDGGPYLPDYRQYLPPRSLKNVEETEDSMGADAGLRSPGRRRRLLDGNEAQEQQPASLNQGGDSATLGNGQVEHQWTGDSFKGGIFQEGVDSALDGESAYDTAAAYAEAMRRWGEYGTGPLPNDDGIGWWANYGDDFDLIGLEEGEDFGKRQSGDFVEIQPHISAAPAFLDAEESRGKRMIVTVSYFKSKRR 323
            MGCTVPRRTF A LALTALA AQEE   LGSRECPLDISVLWT EV SPVYSTPVILPSSAGG KQIVLATLRNVELIDGDGSVPYPWPIEMDDHENSAFLASPALHDVDGDGVQD+CVADTMGW+RWLT GDGGPYLPDYRQYLPPR LKNVEETEDS  ADAGLRSPGRRRRLLD NEAQEQQPASLNQGGDSA LGNGQVEHQWTGDSF+GGIFQ G+DSALDGESAYDTAAAYAEAMRRWGEYGTGPLPNDDGIGWWANYGDDFDLIGLEEGE FGK+Q+G  VEIQPHISAAP  LDAEE +GKRMIVT SYFKSKRR
Sbjct:    1 MGCTVPRRTFAATLALTALATAQEEQTGLGSRECPLDISVLWTAEVDSPVYSTPVILPSSAGGHKQIVLATLRNVELIDGDGSVPYPWPIEMDDHENSAFLASPALHDVDGDGVQDVCVADTMGWIRWLTLGDGGPYLPDYRQYLPPRILKNVEETEDSGDADAGLRSPGRRRRLLDDNEAQEQQPASLNQGGDSAALGNGQVEHQWTGDSFEGGIFQGGLDSALDGESAYDTAAAYAEAMRRWGEYGTGPLPNDDGIGWWANYGDDFDLIGLEEGEGFGKQQAGKVVEIQPHISAAPVLLDAEEGQGKRMIVTGSYFKSKRR 323          
BLAST of mRNA_Ecto-sp13_S_contig1866.5856.1 vs. uniprot
Match: A0A7S4DJS1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJS1_HETAK)

HSP 1 Score: 94.4 bits (233), Expect = 2.280e-20
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 0
Query:   30 GSRECPLDISVLWTVEVGSPVYSTPVILP--SSAGGQKQIVLAT-LRNVELIDGDGSVPYPWPIEMDDHENSAFLA-SPALHDVDGDGVQDICVADTMGWMRWLTPGDGGPYLPDYR 142
            G++ CPLDI VLW  E+GS +YS P+I P  S    +KQI+ +T L  VEL++ DG+    WP+     E  AF A +PA+ DVD DG +D+ V DT G + W+  G  G YL D++
Sbjct:    1 GNQMCPLDIQVLWVQELGSSMYSAPLIHPLHSEDMNEKQIIASTFLSYVELLEADGAAAAGWPLAF---EGRAFRAGAPAIFDVDNDGNEDLAVVDTDGNILWIQVGAYGRYLRDFQ 114          
BLAST of mRNA_Ecto-sp13_S_contig1866.5856.1 vs. uniprot
Match: A0A835YVT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT5_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 8.790e-12
Identity = 76/264 (28.79%), Postives = 110/264 (41.67%), Query Frame = 0
Query:   62 GGQKQIVLATLRNVELID-GDGSVPYPWPIEMDDHENSAFLASPALHDVDGDGVQDICVADTMGWMRWLTPGDGGPYLPDYRQYLPPRSLKNVEETEDSMGADAGLRSPGRRRRLLDGNEAQEQQPASLNQGGDSATLGNGQVEHQWTGDSFKGGIFQEGVDSALDGESAYDTAAAYAEAMRRWGEYGTGPLPNDDGI-GWW-ANYGDDFDLIGLEEGEDFGKRQSGDFVEIQPHISAAPAFLDAEESRGKRMIVTVSYFKSKR 322
            GGQ  +V   + +V  +D   G  P  WP+     E S F AS A+HDVDGDGVQD+C     G + W+  G  G YL DY   +P  +L+   +  + + A+    SP +   L   +  + Q+P   +  G  A            GD       ++   S  DGE      A Y +    +G+  T     DD + G+W A YG     +    G       S  +V +  H  A P   D +      MI+ VSYF  +R
Sbjct:    4 GGQSIVVPTLVHDVAALDVATGLPPEGWPVSF---EGSHFHASAAVHDVDGDGVQDVCAVSAEGHIFWIQMGAQGRYLSDYHVRVP--TLRVRRDWYEGLDAE----SPEKLSELTFFDH-RGQRPLVKDSAGKPA------------GDVEVAKPEEDAAVSTADGEED-QWNAGYDDWKAAYGDVYTSAYMGDDLMAGYWDAAYGGMPPHLRRGGGXGAANATSA-YVHVDAHCLAPPTMADVDGDGSAEMIIAVSYFFDRR 243          
BLAST of mRNA_Ecto-sp13_S_contig1866.5856.1 vs. uniprot
Match: A0A2P6NLJ8_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NLJ8_9EUKA)

HSP 1 Score: 73.6 bits (179), Expect = 1.030e-10
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 0
Query:   35 PLDISVLWTVEVGSPVYSTPVILPSSAGGQKQIVLATLRN-VELIDGDGSVPYPWPIEMDDHENSAFLASPALHDVDGDGVQDICVADTMGWMRWLT 130
            P+ +++LW  E+GS VYSTP+I    A G K+I++AT ++ VE+IDG G+    WP        S FLA P   D +GD   +I V+   G + +LT
Sbjct:   54 PVPLNMLWMAELGSSVYSTPIIQDLEADGSKEIIIATSQSYVEVIDGRGNKLPGWPYAF---PGSVFLAGPLSFDTEGDNRNEIIVSTETGEIVFLT 147          
BLAST of mRNA_Ecto-sp13_S_contig1866.5856.1 vs. uniprot
Match: A0A7S1J7F3_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J7F3_9EUGL)

HSP 1 Score: 67.8 bits (164), Expect = 3.970e-9
Identity = 44/128 (34.38%), Postives = 65/128 (50.78%), Query Frame = 0
Query:   31 SRECPLDISVLWTVEVGSPVYSTPVILPSSAGGQKQIVLAT-LRNVELIDGDGSVPYP-WPIEMDDHENSAFLASPALHDVDGDGVQDICVADTMGWMRWLTPGDGGPYLPDYRQYLPPRSLKNVEET 156
            +R C   I V W+ EVGS VYSTPVI      G+K++VL+T +   E++DG+  +    WP     H + A  AS  +HD+D DG  D+  +   G + +    +G P +    +  P R  K   ET
Sbjct:   97 TRACHHSIDVAWSAEVGSSVYSTPVITDLFGDGKKEVVLSTFVHYFEVLDGETGIDSEGWPYT---HNDIASHASVVVHDIDHDGRNDLMYSTVNGELMFFRD-NGEPIIGRTLKVPPLRVQKRWYET 220          
BLAST of mRNA_Ecto-sp13_S_contig1866.5856.1 vs. uniprot
Match: A0A7S4C7U7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C7U7_9EUGL)

HSP 1 Score: 65.9 bits (159), Expect = 3.660e-8
Identity = 36/96 (37.50%), Postives = 52/96 (54.17%), Query Frame = 0
Query:   31 SRECPLDISVLWTVEVGSPVYSTPVILPSSAGGQKQIVLAT-LRNVELIDGDGSVPYP-WPIEMDDHENSAFLASPALHDVDGDGVQDICVADTMG 124
            S  C   I V W+ EVGS VYSTP+I      G+K++VL+T +   E++DG+  +    WP     H   A  AS  +HD+D DG+ D+  +   G
Sbjct:   82 SAPCHHSIDVAWSAEVGSSVYSTPIITDLFGDGKKEVVLSTFVHYFEVLDGETGIDAAGWPYT---HNEIASHASVVVHDIDHDGMNDLMYSTVNG 174          
BLAST of mRNA_Ecto-sp13_S_contig1866.5856.1 vs. uniprot
Match: A0A3M1IDU2_9BACT (Tandem-95 repeat protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3M1IDU2_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 5.430e-5
Identity = 35/105 (33.33%), Postives = 52/105 (49.52%), Query Frame = 0
Query:   41 LWTVEVGSPVYSTPVILPSSAGGQKQIVLATLR-----------NVELIDGDGSVPYPWPIEMDDHENSAFLASPALHDVDGDGVQDICVADTMGWMRWLTPGDG 134
            LW+V++GS  Y +PV+      G+  IVLA               V L+D  G V + WP+ +D+    +F+A+PAL D+D DG  +I V  +      L   DG
Sbjct:  890 LWSVQLGSTFYGSPVVGDIDGDGRDDIVLAGWDPDAGRKQSVGGGVFLLDHLGQVKFGWPVLIDE----SFVATPALGDLDRDGRLEILVPSSQSRRVHLLEADG 990          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1866.5856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JPG3_9PHAE4.540e-20890.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4DJS1_HETAK2.280e-2044.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A835YVT5_9STRA8.790e-1228.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2P6NLJ8_9EUKA1.030e-1040.21Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A7S1J7F3_9EUGL3.970e-934.38Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A7S4C7U7_9EUGL3.660e-837.50Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A3M1IDU2_9BACT5.430e-533.33Tandem-95 repeat protein n=1 Tax=Verrucomicrobia b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21419:SF23PROTEIN DEFECTIVE IN EXINE FORMATION 1coord: 27..320
NoneNo IPR availablePANTHERPTHR21419FAMILY NOT NAMEDcoord: 27..320
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..323
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.793
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 87..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1866contigEcto-sp13_S_contig1866:704..5410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1866.5856.1mRNA_Ecto-sp13_S_contig1866.5856.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1866 704..5708 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1866.5856.1 ID=prot_Ecto-sp13_S_contig1866.5856.1|Name=mRNA_Ecto-sp13_S_contig1866.5856.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=324bp
MGCTVPRRTFVAILALTALAAAQEEPMRLGSRECPLDISVLWTVEVGSPV
YSTPVILPSSAGGQKQIVLATLRNVELIDGDGSVPYPWPIEMDDHENSAF
LASPALHDVDGDGVQDICVADTMGWMRWLTPGDGGPYLPDYRQYLPPRSL
KNVEETEDSMGADAGLRSPGRRRRLLDGNEAQEQQPASLNQGGDSATLGN
GQVEHQWTGDSFKGGIFQEGVDSALDGESAYDTAAAYAEAMRRWGEYGTG
PLPNDDGIGWWANYGDDFDLIGLEEGEDFGKRQSGDFVEIQPHISAAPAF
LDAEESRGKRMIVTVSYFKSKRR*
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