prot_Ecto-sp13_S_contig1865.5852.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1865.5852.1
Unique Nameprot_Ecto-sp13_S_contig1865.5852.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length755
Homology
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: D8LM04_ECTSI (CID domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM04_ECTSI)

HSP 1 Score: 921 bits (2380), Expect = 0.000e+0
Identity = 641/756 (84.79%), Postives = 644/756 (85.19%), Query Frame = 0
Query:    1 MGKVTLEEYIDLFRGKAEQMGEFPDKIIINALTGTAKRHRTDKAQAIATVLQNMLMDPNHPAKHKLPICFLVDSLVKNITDPFADLFENGLTRWFCSAYDAVDEKSKKHLGRVVATWEVQSIFSADKRKEIQRYMLNAKPAAASLXXXXXXXXXXXXXXXXXXXXXXXXXXXPLPTVAPYQPPXXXXXXXXXXXXXXXXXXXXXXXXXXASAVAAPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAMVDSRMKQLLDQQLLELGESSTMSLDDLWRTNAELASGFRLVAQAQVHEQLGLPXXXXXXXXXXXXXXXXXXXXXXXHQTAPPLPQDFGRAVQVANEVAAGARVALNASLRGDLSGAQVQAAEAAGKAAMLACLLGGDAAAAVGGGFGGAGAGVGVYLADLDPLDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGGGEGEDGAXXXXXXXE--AVGAPGEAAGGARQIIVHKLCLDVSGLRDKDEITWADLMPGTPRQKKRPAEGGDALDAAFFGEGGDDAAEQEDEKDGSGETGDSSGTRVXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLKRAKAEGAAEEENRFGEVDAMGVVKAEEGGSGAGQGEVYDMDEELDFEA 754
            MGKVTLEEYIDLFRGKAEQMGEFPDKIIINALTGTAKRHRTDKAQAIATVLQNMLMDP+HPAKHKLPICFLVDSLVKNITDPFADLFENGLTRWFCSAYDAVDEKSKKHLGRVVATWEVQSIFSADKRKEIQRYMLNAKPAAASL XXXXXXXXXXXXXXXXXXXXXXXXXXPLPTVAPYQPP   XXXXXXXXXXXXXXXXXXXXXXXASAVAA  XXXXXXXXXXXXXXXXXXXXXXXXXX  QAMVDSRMKQLLDQ                                                                         QDFGRAVQVANEVAAGARVAL+ASLRGDLSGAQVQAAEAAGKAAMLACLLGGDAAAAVGGG GGAGAGVGVYLADLDPLDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAG     XXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGGGE     XXXXXXX   A GAPGEAAGGARQIIVHKLCLDVSGLRDKDEITWADLMPGTPRQKKRPAEGGDALDAAFFGEGGDDAAEQEDEKDG+GETGDSSGT V       XXXXXXXXXXXXXXX     PPLKRAKAEGA EEEN FGEVDA GVVKAEEGGSGAGQGEVYDMDEELDFEA
Sbjct:    1 MGKVTLEEYIDLFRGKAEQMGEFPDKIIINALTGTAKRHRTDKAQAIATVLQNMLMDPSHPAKHKLPICFLVDSLVKNITDPFADLFENGLTRWFCSAYDAVDEKSKKHLGRVVATWEVQSIFSADKRKEIQRYMLNAKPAAASLSXXXXXXXXXXXXXXXXXXXXXXXXXXPLPTVAPYQPPQPQXXXXXXXXXXXXXXXXXXXXXXXASAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQAMVDSRMKQLLDQ-------------------------------------------------------------------------QDFGRAVQVANEVAAGARVALDASLRGDLSGAQVQAAEAAGKAAMLACLLGGDAAAAVGGGLGGAGAGVGVYLADLDPLDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAG----SXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGGGEXXXXXXXXXXXXXXXAGGAPGEAAGGARQIIVHKLCLDVSGLRDKDEITWADLMPGTPRQKKRPAEGGDALDAAFFGEGGDDAAEQEDEKDGAGETGDSSGTHVSDSGGGHXXXXXXXXXXXXXXXGEDDGPPLKRAKAEGATEEENGFGEVDATGVVKAEEGGSGAGQGEVYDMDEELDFEA 679          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: A0A835ZEB3_9STRA (CID domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEB3_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.960e-23
Identity = 105/300 (35.00%), Postives = 129/300 (43.00%), Query Frame = 0
Query:  430 EGFPFWCKQDGTRFAKQAQLDAHMDLLF------------RRKHARREQKGVAASREWYCTDEEWMTDFGRL---------------------------APPAGL-GAGDXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------DGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACY-------------VTVKGGGEGEDGAXXXXXXXEAVGAPGEAAGGA-RQIIVHKLCLDVSGLRDKDEITWADLMP----GTPRQKKRPAEG 638
            EG P+ CKQDG RF  QA LDAH+DLLF            +R+  RREQ   AA+R WYCT  +W+TDFG                             AP AG   AGD                     XXXX                                 D +   VPAD+  S+CRICG+ F MFYD DEEEWM+RNACY             V++K         XXXXXXX         +G A   IIVH+LCLD SG+R+ + +  A+L+P    G   ++KR A G
Sbjct:  636 EGRPYLCKQDGQRFLTQAALDAHLDLLFXXXXXXXXXXXXQRRRMRREQTTAAATRPWYCTMAQWVTDFGSKTADQKGRDAAAAQPGAAAAAGEQQPAGAPDAGADAAGDAFGGGAAEQVLSCGTVVQRASXXXXXXXXXXXXXXGISGSAXXXXXXXXXXXXSIGPVDYNSFSVPADDEQSRCRICGEPFEMFYDGDEEEWMFRNACYANLAPEDANSANTVSLKXXXXXXXXXXXXXXXXXXXXXXAPDSGAAPTAIIVHRLCLDASGVREGELLRVANLLPTTAPGAAGKRKRDAAG 935          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: T0QPI6_SAPDV (CID domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QPI6_SAPDV)

HSP 1 Score: 96.3 bits (238), Expect = 5.200e-17
Identity = 56/158 (35.44%), Postives = 78/158 (49.37%), Query Frame = 0
Query:  412 DVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVK 569
            D++   R   A +  LY EG PF C   G RFA + QL  HMD LF+   A+RE+     SR WY  +E+W TDF  ++    +                             D ++  VP DE  +KCRICG++F   +D+DEEEWMY+NA   T++
Sbjct:  359 DIQVNKRRIDANIYLLY-EGLPFVCAGSGVRFANEKQLSEHMDFLFQYNRAQRERTKGGNSRPWYPDEEQWATDFCAVSSTKEVDG-----------VAAIAQQEAEVDKDVLDQAR--VPVDEATTKCRICGEQFSKCWDDDEEEWMYQNAVRGTIQ 502          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: A0A7S2DR18_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DR18_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.150e-16
Identity = 62/221 (28.05%), Postives = 99/221 (44.80%), Query Frame = 0
Query:  415 SLARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGV-AASREWYCTDEEWMTDFGRLAPPAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGGGEGEDGAXXXXXXXEAVGAPGEAAGGARQIIVHKLCLDVSGLRDKDEITWADLMPGTPRQKKR 634
            SL + N A + +L+    P +   DG +F  Q QL AH ++L  R   RR++    +ASR W+CT E+W +DF + A  +                                  +  +  D+  +KCRICG+ F MF++++ EEWMYRNA  V ++                + +    +    A  IIVH+ C D   +  +  +  A LMP TP+Q ++
Sbjct:  132 SLNQKNAAVISQLFR--LPHYSSLDGMQFKHQQQLVAHEEMLQTRIRERRDEAAHGSASRPWFCTVEQWCSDFAQDASDS---------------TNPMEGVPVESEDADVPAKEVLIVVDQAVTKCRICGEPFEMFWEDEVEEWMYRNAVRVKIQA-------------TPDPLDPTSDVTSTAVDIIVHRPCSDA--VSTEGIVQVAQLMPETPKQSEK 320          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: F0W6S2_9STRA (Uncharacterized protein AlNc14C26G2558 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W6S2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 6.240e-15
Identity = 60/203 (29.56%), Postives = 82/203 (40.39%), Query Frame = 0
Query:  424 VRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGGGEGEDGAXXXXXXXEAVGAPGEAAGGARQIIVHKLCLDVSGLRDKDEITWADLMP 626
            +++LY    P  C++ G RF +Q +LDAH+D LF+   + +E+     SR WY   E+W TDF                                      +   + VP DE  +KCRICG+ F   +D DEEEWMY NA   +V    EG                        +  I HK C D   L +   ITW  L+P
Sbjct:  463 IQKLYA-ALPLVCRESGVRFREQKKLDAHLDFLFQYNRSVKERGKGGISRAWYPNKEQWTTDFSTDHTAR------KNTSSSFFDQDSKKMQDDKEDQVLMELRNARVPVDESVTKCRICGEPFEKCWDEDEEEWMYINAIVGSVHAHDEGN----------------------VKSTIFHKYCYDTV-LSNSKCITWEHLIP 635          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: W4G7E6_9STRA (CID domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G7E6_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 3.870e-14
Identity = 74/242 (30.58%), Postives = 99/242 (40.91%), Query Frame = 0
Query:  424 VRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGGGEGEDGAXXXXXXXEAVGAPGEAAGGARQIIVHKLCLDVSGLRDKDEITW-ADLMPGTPRQ--KKRPAEGGDALDAAFFGEGG---DDAAEQED 659
            V RLY +  P      G RF  QAQL  HMD LF    A RE+     SR WY  + +W TDF  ++                                  + S+  VP D   +KCRICG+ F   +D DEEEWMY+NA   +++                + V          +Q I HK C D +    K ++   + L PG+P     KRP    +  DA + GE G   DD  EQ+D
Sbjct:  396 VYRLY-DALPHVSTSSGLRFKDQAQLSVHMDFLFHYNRALRERTKGGISRSWYPNEAQWTTDFCAVS-------NSKEETSAGFVQLEDKLTVPDFDKDALNASR--VPVDGSITKCRICGEPFTKCWDEDEEEWMYQNAVVGSIES--------------TDVV---------PKQTIFHKYCYDSAVASSKSKVILPSQLAPGSPVVVGSKRPMSEVEE-DATWRGETGRVDDDKDEQQD 603          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: A0A077X026_9FUNG (CID domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077X026_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 7.780e-14
Identity = 53/163 (32.52%), Postives = 76/163 (46.63%), Query Frame = 0
Query:  411 LDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAK----QAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFG-RLAP-PAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVT 567
            L+ + L    P AV  LY  G P  CKQ G R+ K    Q+++DAH+D  FR+    +E+     SR W+ T++EW++  G  LA   A     D                         D     +P +     C ICG+RF+ F+++DEEEWMY+NA  V 
Sbjct:  273 LESKDLQIARPGAVEVLYS-GLPLQCKQCGFRYPKTEQGQSKMDAHLDSHFRQNRRMKERVKRGLSRSWFVTEDEWISGAGGELASHQAPTFLNDSTSSAHPHGHVGSPSAQAGSETLGPDSQVVVMPDENNRKPCPICGERFVDFWNDDEEEWMYKNAVLVN 434          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: A0A024U0Z4_9STRA (CID domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U0Z4_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 9.080e-14
Identity = 62/207 (29.95%), Postives = 82/207 (39.61%), Query Frame = 0
Query:  424 VRRLYGEGFPFWCKQDGTRFAKQAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVKGGGEGEDGAXXXXXXXEAVGAPGEAAGGARQIIVHKLCLDVSGLRDKDE-ITWADLMPGTP 629
            V RLY +  P      G RF  QAQL  HMD LF    A RE+     SR WY  + +W TDF  ++                                  + ++  VP D   +KCRICG+ F   +D DEEEWMY+NA   T++                + V          +  I HK C D +    K E I  + L PG+P
Sbjct:  402 VYRLY-DALPHVSSSSGLRFKDQAQLSKHMDFLFHYNRALRERTKGGISRSWYPNEAQWTTDFCAVS-------NSKEETSAGFVQAEAKTAVPELDKEALNAAR--VPVDGSITKCRICGESFTKCWDEDEEEWMYQNAVVGTIR--------------TNDVV---------PKHTIFHKYCYDSAVASSKSEGILPSQLAPGSP 575          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: A0A8H7QZ07_9FUNG (CID domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QZ07_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 1.020e-13
Identity = 52/163 (31.90%), Postives = 73/163 (44.79%), Query Frame = 0
Query:  411 LDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAK----QAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVK 569
            LD + L    P A+  LY    P  CKQ G R+ K    QA++DAH+D  FR+    +E+     SR W+ T EEW+   G  +      A                           D     +P D+    C ICG+RF+ F+++DEEEWMY+NA  +  K
Sbjct:  365 LDSKDLQIARPGAIELLYSAK-PLQCKQCGFRYPKTDKGQAKMDAHLDAHFRQNRKMKERVKRGLSRSWFVTVEEWINGEGGESTSQQAPAFLHDGMGHVNSKSTEKSAQPSEETINPDHYTVIMPNDDSRKPCAICGERFIDFWNDDEEEWMYKNAIMIDDK 526          
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Match: A0A8H7STS3_9FUNG (CID domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7STS3_9FUNG)

HSP 1 Score: 84.7 bits (208), Expect = 2.530e-13
Identity = 57/167 (34.13%), Postives = 77/167 (46.11%), Query Frame = 0
Query:  411 LDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAK----QAQLDAHMDLLFRRKHARREQKGVAASREWYCTDEEWMT-DFGRLAP---PAGLGAGDXXXXXXXXXXXXXXXXXXXXXXXXXDGSKSCVPADERFSKCRICGDRFLMFYDNDEEEWMYRNACYVTVK 569
            LD + L    P A+  LY    P  CKQ G R+ K    QA++DAH+D  FR+    +E+     SR W+ T EEW+  + G L     PA L  G                          D     +P D+    C ICG+RF+ F+++DEEEWMY+NA  V  K
Sbjct:  378 LDSKDLQIARPGAIELLYSAE-PLQCKQCGFRYPKTEKGQAKMDAHLDSHFRQNRKMKERVKRGLSRSWFVTVEEWINGEGGELTSQQAPAFLHDG---MGHVNNKSTEKSTQPSGEEAINPDHYTVIMPNDDNRKPCAICGERFIDFWNDDEEEWMYKNAIKVEDK 540          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1865.5852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM04_ECTSI0.000e+084.79CID domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835ZEB3_9STRA1.960e-2335.00CID domain-containing protein n=1 Tax=Tribonema mi... [more]
T0QPI6_SAPDV5.200e-1735.44CID domain-containing protein n=2 Tax=Saprolegnia ... [more]
A0A7S2DR18_9STRA3.150e-1628.05Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0W6S2_9STRA6.240e-1529.56Uncharacterized protein AlNc14C26G2558 n=1 Tax=Alb... [more]
W4G7E6_9STRA3.870e-1430.58CID domain-containing protein n=3 Tax=Aphanomyces ... [more]
A0A077X026_9FUNG7.780e-1432.52CID domain-containing protein n=1 Tax=Lichtheimia ... [more]
A0A024U0Z4_9STRA9.080e-1429.95CID domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A8H7QZ07_9FUNG1.020e-1331.90CID domain-containing protein n=1 Tax=Mucor saturn... [more]
A0A8H7STS3_9FUNG2.530e-1334.13CID domain-containing protein n=1 Tax=Thamnidium e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006569CID domainSMARTSM00582558neu5coord: 12..136
e-value: 1.0E-4
score: 24.5
IPR006569CID domainPROSITEPS51391CIDcoord: 1..139
score: 19.247
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 5..143
e-value: 1.9E-22
score: 81.6
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 23..139
IPR006903RNA polymerase II-binding domainPFAMPF04818CTD_bindcoord: 65..123
e-value: 1.6E-7
score: 32.1
NoneNo IPR availablePANTHERPTHR15921:SF3PRE-MRNA CLEAVAGE COMPLEX 2 PROTEIN PCF11coord: 179..666
NoneNo IPR availablePANTHERPTHR15921PRE-MRNA CLEAVAGE COMPLEX IIcoord: 23..188
coord: 179..666
NoneNo IPR availablePANTHERPTHR15921:SF3PRE-MRNA CLEAVAGE COMPLEX 2 PROTEIN PCF11coord: 23..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1865contigEcto-sp13_S_contig1865:6362..9976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1865.5852.1mRNA_Ecto-sp13_S_contig1865.5852.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1865 6362..10397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1865.5852.1 ID=prot_Ecto-sp13_S_contig1865.5852.1|Name=mRNA_Ecto-sp13_S_contig1865.5852.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=755bp
MGKVTLEEYIDLFRGKAEQMGEFPDKIIINALTGTAKRHRTDKAQAIATV
LQNMLMDPNHPAKHKLPICFLVDSLVKNITDPFADLFENGLTRWFCSAYD
AVDEKSKKHLGRVVATWEVQSIFSADKRKEIQRYMLNAKPAAASLSSSSP
SPPPVTTTASTSAAVTVTTVPPPLPTVAPYQPPQPQAPPAAPVAAAAAPL
PPPLPPLPPASAVAAPVATPVAAPVAAPVAASVAAPVAAPVAPDIQAMVD
SRMKQLLDQQLLELGESSTMSLDDLWRTNAELASGFRLVAQAQVHEQLGL
PPPPPPPAIIIGPLQQQQQQPPPPHQTAPPLPQDFGRAVQVANEVAAGAR
VALNASLRGDLSGAQVQAAEAAGKAAMLACLLGGDAAAAVGGGFGGAGAG
VGVYLADLDPLDVRSLARGNPAAVRRLYGEGFPFWCKQDGTRFAKQAQLD
AHMDLLFRRKHARREQKGVAASREWYCTDEEWMTDFGRLAPPAGLGAGDG
EADGEVGGGGDGEEDGGADEDADPDGSKSCVPADERFSKCRICGDRFLMF
YDNDEEEWMYRNACYVTVKGGGEGEDGAGEDEEEEEAVGAPGEAAGGARQ
IIVHKLCLDVSGLRDKDEITWADLMPGTPRQKKRPAEGGDALDAAFFGEG
GDDAAEQEDEKDGSGETGDSSGTRVGDSGGGDGGGDANGGRPHGEGDGED
DGPPLKRAKAEGAAEEENRFGEVDAMGVVKAEEGGSGAGQGEVYDMDEEL
DFEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006569CID_dom
IPR008942ENTH_VHS
IPR006903RNA_pol_II-bd