prot_Ecto-sp13_S_contig18620.5837.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18620.5837.1
Unique Nameprot_Ecto-sp13_S_contig18620.5837.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length216
Homology
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: A0A6H5JUE4_9PHAE (Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE4_9PHAE)

HSP 1 Score: 382 bits (982), Expect = 3.330e-132
Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0
Query:   20 MRPDLRLTLLLLVSSLGGTGVVNASWTSGRRRSAGPSWTTEGDIEELAGAGRRQLGQQGTPIAESLLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            MR  LR+TLL LV+ LGGTGVVNASWTSGRRRSAGPSWTTEGDIEELAGAGRRQLGQQGTPIAESLLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLL LLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE
Sbjct:    1 MRHALRVTLLFLVNHLGGTGVVNASWTSGRRRSAGPSWTTEGDIEELAGAGRRQLGQQGTPIAESLLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 197          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: D8LKA7_ECTSI (Proteasome subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA7_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 2.370e-79
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0
Query:   97 RNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            RNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLL LLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE
Sbjct:   23 RNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLRLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 142          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: A0A835YWZ6_9STRA (Nucleophile aminohydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ6_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.950e-40
Identity = 77/134 (57.46%), Postives = 98/134 (73.13%), Query Frame = 0
Query:   84 SLLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGD-THLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            SL QT    + S+R   G++PY +NGGTVVAVAGPD+ II AD+RLS  Y ILSR VTR+H +SG  T + TAGCW+DTQGLL  ++ L+ DYE +Q+ ++ T A++R+LS  LY RR FPFYT NIV GLD E
Sbjct:   69 SLKQTNWKEQVSKR-ADGWQPYEDNGGTVVAVAGPDFVIIGADTRLSVNYNILSRKVTRIHGISGARTFIGTAGCWSDTQGLLKAMQGLVGDYEWQQQHSISTAALARLLSNVLYSRRSFPFYTHNIVAGLDRE 201          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: A0A7R9JKA2_TIMCA ((California timema) hypothetical protein n=1 Tax=Timema californicum TaxID=61474 RepID=A0A7R9JKA2_TIMCA)

HSP 1 Score: 129 bits (323), Expect = 5.670e-34
Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = 0
Query:  100 AGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            AGF PYA+NGG++VA+AG DY IIA+D+RLS G++I +R  +++ +LS  T L   GCW DT  L  +LE  ++ Y  E ++ M T AV++MLST LYY+R FP+Y  NI+ GLDEE
Sbjct:   23 AGFSPYADNGGSIVAIAGEDYAIIASDTRLSSGFSIYTREQSKLFKLSDVTVLGATGCWCDTLTLTRILEARLQMYLHEHQKCMSTPAVAQMLSTMLYYKRFFPYYVSNILAGLDEE 139          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: A0A1E7F375_9STRA (Proteasome subunit beta n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F375_9STRA)

HSP 1 Score: 131 bits (329), Expect = 6.710e-34
Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = 0
Query:  102 FEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            F PY  NGGT VA+AGPDY +IAAD+RLS GY ILSRN++++H LSG   L +AGC  D   L  +L+  ++ Y    R+TM T AV++ML   LYY+R FP+Y FN+ GG+DEE
Sbjct:   59 FSPYDFNGGTCVAIAGPDYAVIAADTRLSSGYEILSRNMSKLHPLSGKCILGSAGCKTDVDQLRSVLDIKMKMYLHNHRKTMSTPAVAQMLGNTLYYKRFFPYYAFNVFGGIDEE 173          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: UPI00083FEA10 (proteasome subunit beta type-1 n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI00083FEA10)

HSP 1 Score: 129 bits (323), Expect = 2.080e-33
Identity = 63/132 (47.73%), Postives = 88/132 (66.67%), Query Frame = 0
Query:   85 LLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            L ++ P  E        F PYA+NGG+V+A+AG D+C++AAD+RLS G++I +R   ++  LS  T L  +GCW DT  L  LL   ++ YE E ++ M T A+++MLST LYY+R FP+Y  NIVGGLDEE
Sbjct:    4 LGRSLPDYETETAKMKSFSPYADNGGSVIALAGDDFCVLAADTRLSAGFSIYTREQQKLFPLSNKTVLGCSGCWCDTLTLTRLLTARMQMYEHEHQKEMPTPAIAQMLSTMLYYKRFFPYYVSNIVGGLDEE 135          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: UPI0010F95A10 (proteasome subunit beta type-1 n=1 Tax=Osmia bicornis bicornis TaxID=1437191 RepID=UPI0010F95A10)

HSP 1 Score: 129 bits (323), Expect = 2.310e-33
Identity = 64/138 (46.38%), Postives = 92/138 (66.67%), Query Frame = 0
Query:   79 TPIAESLLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            T I+E+  ++ P  E        F PYA+NGG+V+A+AG ++C+IAAD+RLS G++I +R   ++  LS  T L  +GCW DT  L  LL   ++ YE E ++ M T AV++MLST LYY+R FP+Y  NI+GGLDE+
Sbjct:    2 TFISENPGRSLPDYETQAAKMKSFSPYADNGGSVIALAGDEFCVIAADTRLSTGFSIYTREQQKLFPLSNKTILGCSGCWCDTLTLTRLLSARMQMYEHEHQKEMPTPAVAQMLSTMLYYKRFFPYYVSNILGGLDEK 139          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: A0A6P3DDD7_BOMTE (proteasome subunit beta type-1 n=8 Tax=Apinae TaxID=70987 RepID=A0A6P3DDD7_BOMTE)

HSP 1 Score: 128 bits (322), Expect = 3.250e-33
Identity = 63/136 (46.32%), Postives = 90/136 (66.18%), Query Frame = 0
Query:   81 IAESLLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            + E+  ++ P  E        F PYA+NGG+V+A+AG D+C+IAAD+RLS G++I +R   ++  LS  T L  +GCW DT  L  LL   ++ YE E ++ M T AV++MLST LYY+R FP+Y  NI+GGLDE+
Sbjct:    4 LNENSGRSLPDYETQAAKMKSFSPYADNGGSVIALAGDDFCVIAADTRLSTGFSIYTREQQKLFPLSSKTILGCSGCWCDTLTLTRLLSARMQMYEHEHQKEMPTLAVAQMLSTMLYYKRFFPYYVSNILGGLDED 139          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: L1JTG0_GUITC (Proteasome subunit beta n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JTG0_GUITC)

HSP 1 Score: 128 bits (321), Expect = 3.930e-33
Identity = 64/115 (55.65%), Postives = 85/115 (73.91%), Query Frame = 0
Query:  102 FEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            F PY NNGGT +A+AG D+CIIAADSRLS GY+ILSRN  +V +L+  T +A++GC AD   L   L++ I+ Y  +  + M T AV++ML+T LY+RR FP+YTFNIVGGLD+ 
Sbjct:   19 FSPYQNNGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLTTKTCIASSGCNADMVTLQKYLKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFNIVGGLDQN 133          
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Match: UPI000258DA54 (proteasome subunit beta type-1 n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI000258DA54)

HSP 1 Score: 128 bits (321), Expect = 4.580e-33
Identity = 63/138 (45.65%), Postives = 89/138 (64.49%), Query Frame = 0
Query:   79 TPIAESLLQTPPGLEESRRNGAGFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDTHLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRRGFPFYTFNIVGGLDEE 216
            T + E+   + P  E        F PYA+NGG+V+A+AG D+C+IAAD+RLS G++I +R   ++  LS  T L  +GCW DT  L   L   ++ YE E ++ M T AV++MLST LYYRR FP+Y  NI+GGLD++
Sbjct:    2 TFLTENSRGSLPDYETQAAKMQSFNPYADNGGSVIALAGDDFCVIAADTRLSVGFSIYTREQQKLFPLSSKTVLGCSGCWCDTLTLTRFLSARMQMYEHEHQKEMATPAVAQMLSTMLYYRRFFPYYISNIIGGLDDK 139          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18620.5837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUE4_9PHAE3.330e-13296.45Proteasome subunit beta n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKA7_ECTSI2.370e-7999.17Proteasome subunit beta n=1 Tax=Ectocarpus silicul... [more]
A0A835YWZ6_9STRA2.950e-4057.46Nucleophile aminohydrolase n=1 Tax=Tribonema minus... [more]
A0A7R9JKA2_TIMCA5.670e-3452.14(California timema) hypothetical protein n=1 Tax=T... [more]
A0A1E7F375_9STRA6.710e-3453.91Proteasome subunit beta n=1 Tax=Fragilariopsis cyl... [more]
UPI00083FEA102.080e-3347.73proteasome subunit beta type-1 n=1 Tax=Ceratina ca... [more]
UPI0010F95A102.310e-3346.38proteasome subunit beta type-1 n=1 Tax=Osmia bicor... [more]
A0A6P3DDD7_BOMTE3.250e-3346.32proteasome subunit beta type-1 n=8 Tax=Apinae TaxI... [more]
L1JTG0_GUITC3.930e-3355.65Proteasome subunit beta n=1 Tax=Guillardia theta (... [more]
UPI000258DA544.580e-3345.65proteasome subunit beta type-1 n=1 Tax=Megachile r... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 107..216
e-value: 6.7E-19
score: 68.1
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10coord: 102..216
e-value: 4.5E-33
score: 116.6
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 98..216
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 103..216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 26..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..216
IPR035202Proteasome subunit beta 1PANTHERPTHR11599:SF59PROTEASOME SUBUNIT BETA TYPE-1coord: 103..216
IPR016050Proteasome beta-type subunit, conserved sitePROSITEPS00854PROTEASOME_BETA_1coord: 113..160
IPR023333Proteasome B-type subunitPROSITEPS51476PROTEASOME_BETA_2coord: 109..216
score: 28.412

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18620contigEcto-sp13_S_contig18620:903..2934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18620.5837.1mRNA_Ecto-sp13_S_contig18620.5837.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18620 903..2936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18620.5837.1 ID=prot_Ecto-sp13_S_contig18620.5837.1|Name=mRNA_Ecto-sp13_S_contig18620.5837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=216bp
VPACISLLRLVRSHTAAGMMRPDLRLTLLLLVSSLGGTGVVNASWTSGRR
RSAGPSWTTEGDIEELAGAGRRQLGQQGTPIAESLLQTPPGLEESRRNGA
GFEPYANNGGTVVAVAGPDYCIIAADSRLSDGYTILSRNVTRVHRLSGDT
HLATAGCWADTQGLLHLLEYLIRDYEMEQRRTMGTKAVSRMLSTHLYYRR
GFPFYTFNIVGGLDEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001353Proteasome_sua/b
IPR029055Ntn_hydrolases_N
IPR035202Proteasome_beta1
IPR016050Proteasome_bsu_CS
IPR023333Proteasome_suB-type