prot_Ecto-sp13_S_contig18599.5822.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18599.5822.1
Unique Nameprot_Ecto-sp13_S_contig18599.5822.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length722
Homology
BLAST of mRNA_Ecto-sp13_S_contig18599.5822.1 vs. uniprot
Match: D8LHQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ5_ECTSI)

HSP 1 Score: 854 bits (2206), Expect = 1.990e-296
Identity = 567/716 (79.19%), Postives = 585/716 (81.70%), Query Frame = 0
Query:    9 GRTAPVSTRHRKRERRSGERFHQG-GXXXXXXXXXXXXAAVAAASWFRGDVQEPAADTAHAASGSADGGAQSVGGVRRDGVAARGLLEGMEEEPDLAAIFLRMIGMQPNLSQHSDGAVVASPAAAEGEETTGTGLAVHKRSWRFEDGKSDQEFAEKLIAGLDGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFATALAGAFDTAGRGGGGGELAEKLLSGLERDGEGQAQAATLLAGLDAADRHELAGALVDXXRRAGQDDRAHEXXXXMDSARDEEELAEVVAAAFGSVRKQVAVAGQGGGAELLDNLLIAFLRKIERPTPVAGHVADEGNGQEALLLLHAAGDRQESPRERSAPEGRLPRLKPTYGSTSDGDGLTKYVHSNRVMDYVREVVVNGVAHGVLEKRTFPRRAGASKQDAAAASEKEVEGEEADNFIFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPTVLPANNKRFRGPLSSSGYADTSGLYRGGRXXXXXXXXXXXGTFFTSTTLLEGEEEGIEVPDAQRPGGGYPLLPRPPARDTAERRRSAHGAVDSS-WPSRSFGGMLGDLFRGTFAGLLQSREEGSGERSSPVFEEEEDKEEQDEDARMFGAAEWSWRSAQARXXXXXXXXXXXXXXXXXXXXXXXSSGNYQVEIVASTGDTSTNWNGASYRLEVGTVVPGQTLPSSSLLAFGTINE 722
            GRTAP S RHRKRERR  ERFHQG G    XXXXXXX AAVAAASWFRGDVQEPAAD+ HAAS SA GGA SVGGV  DGVAARGLLEGMEEEPDLAAIFLRMIGMQP+LSQHSD AV ASPAAAEGEETTGTGLA HKRSWRFEDGKSDQEFAEKLIAGLDGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+FATALAGAFDTAGRGGGGGELAEKLLSGLERDGEGQ QAATLLAGLDA DR ELAGALVD  RRAGQDDRAHE    MDSARDEEELA VVAAAFGSVRKQVAVAG+GGGAELLDNLL AFLRKIERP PV G VADEG GQEALLLLHAAGDRQ SPRER AP+GR  RL+PTYGSTSD DG+T+YV++N V+D VR+VVVNGVAHGVLEKRTFP   GASKQDAAAASEKEVEG      IFD                                S TVLPAN+KRFRGPLSSSG+ADTSGLYRGG  XXXXXXXXXXG F T TTLLE EEEGIE P  +RPGG                 RSAHGAVDSS  PSRSFGGMLGDLFRGTFAGLLQS EEGSGERSSP FEEEE      EDAR+FGAAEWS RSAQAR     XXXXXXXXXXXXX     + GNYQVEIVASTGDTSTNWNGA+YRLEVGTVVPGQTLPSSSLLAFGTINE
Sbjct:   30 GRTAPASIRHRKRERRPVERFHQGAGAEGAXXXXXXXTAAVAAASWFRGDVQEPAADSTHAASRSAAGGAPSVGGVSGDGVAARGLLEGMEEEPDLAAIFLRMIGMQPDLSQHSDVAV-ASPAAAEGEETTGTGLAAHKRSWRFEDGKSDQEFAEKLIAGLDGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFATALAGAFDTAGRGGGGGELAEKLLSGLERDGEGQVQAATLLAGLDATDRLELAGALVDGLRRAGQDDRAHELSAGMDSARDEEELAVVVAAAFGSVRKQVAVAGRGGGAELLDNLLNAFLRKIERPAPVPGRVADEGEGQEALLLLHAAGDRQGSPRERPAPDGRFQRLEPTYGSTSDSDGVTEYVYANGVVDDVRDVVVNGVAHGVLEKRTFPHGDGASKQDAAAASEKEVEGXXXXXXIFDDDDAHSLTSRSDDNDGSSFGTRSSSYSSGPLSSSTVLPANSKRFRGPLSSSGHADTSGLYRGG-GXXXXXXXXXXGAFSTPTTLLEVEEEGIEEPATERPGGXXXXXXXXXXXXXXXXXRSAHGAVDSSPSPSRSFGGMLGDLFRGTFAGLLQSWEEGSGERSSPAFEEEEG-----EDARLFGAAEWSGRSAQARRRRLYXXXXXXXXXXXXXGDNDNTGGNYQVEIVASTGDTSTNWNGAAYRLEVGTVVPGQTLPSSSLLAFGTINE 738          
BLAST of mRNA_Ecto-sp13_S_contig18599.5822.1 vs. uniprot
Match: A0A6H5L752_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L752_9PHAE)

HSP 1 Score: 797 bits (2058), Expect = 4.640e-278
Identity = 562/715 (78.60%), Postives = 580/715 (81.12%), Query Frame = 0
Query:   10 RTAPVSTRHRKRERRSGERFHQGGXXXXXXXXXXXXAAVAAASWFRGDVQEPAADTAHAASGSADGGAQSVGGVRRDGVAARGLLEGMEEEPDLAAIFLRMIGMQPNLSQHSDGAVVASPAAAEGEETTGTGLAVHKRSWRFEDGKSDQEFAEKLIAGLDGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFATALAGAFDTAGRGGGGGELAEKLLSGLERDGEGQAQAATLLAGLDAADRHELAGALVDXXRRAGQDDRAHEXXXXMDSARDEEELAEVVAAAFGSVRKQVAVAGQGGGAELLDNLLIAFLRKIERPTPVAGHVADEGNGQEALLLLHAAGDRQESPRERSAPEGRLPRLKPTYGSTSDGDGLTKYVHSNRVMDYVREVVVNGVAHGVLEKRTFPRRAGASKQDAAAASEKEVEGEEADNFIFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPTVLPANNKRFRGPLSSSGYADTSGLYRGGRXXXXXXXXXXXGTFFTSTTLLEGEEEGIEVPDAQRPGGGYPLLPRPPARDTAERRRSAHGAVDSSW-PSRSFGGMLGDLFRGTFAGLLQSREEGSGERSSPVFEEEEDKEEQD-EDARMFGAAEWSWRSAQARXXXXXXXXXXXXXXXXXXXXXXXSSGNYQVEIVASTGDTSTNWNGASYRLEVGTVVPGQTLPSSSLLAFGTINE 722
            RTAP STRHRKRERRS E FHQGG            AAV AASWFRGDVQ PAAD+ HAASGSA GGA SVGGVR DGVAARGLLEGM+EEPDLAAI++RMIGMQP+LSQH DGA VASPAAAEGEETTGTGLA HKRSWRFEDGKSDQEFAEKLIAGLD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    + ATALA AFDTAGRGGGGGELAEKLLSGLERDGEGQAQAATLLAGLDA DRHELAGALVD  RRAGQDDRA E    MDSARDEEELA VVAAAFGSVRKQVAVAG+GGGA LLDNLLIAFLRKIERP PVAGHVADEG GQEALLLLHAAGDRQ S RER APEGR PRL+  YGSTSDGDG+T+YV++N V+DYVR+VVVNGVAH VLEKR FPR AGASKQDAAAASEKE EGE        XXXXXXXXXXXXXXXXXX              S TVLPANNKRFRGPLSSSGYADTSGLYRGG XXXXXXXXXXX                                 R    DTAERRRSAHGAVDSS  PSRSFGGMLG+LFRGTFAGLLQSREEGSGERSSPVFE E+D      EDAR+FGAAEWS RSAQARXXXXXXXXXXXXXXXXXXXXXXX  GNYQVEIVASTGDTS       YRLEVGTVVPGQ+LPSSSLLAFGTINE
Sbjct:   31 RTAPASTRHRKRERRSVESFHQGGARGA--------AAVPAASWFRGDVQGPAADSTHAASGSAAGGAPSVGGVRGDGVAARGLLEGMDEEPDLAAIYVRMIGMQPDLSQHLDGAFVASPAAAEGEETTGTGLAAHKRSWRFEDGKSDQEFAEKLIAGLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDREELATALAWAFDTAGRGGGGGELAEKLLSGLERDGEGQAQAATLLAGLDATDRHELAGALVDGLRRAGQDDRAQELSAGMDSARDEEELAVVVAAAFGSVRKQVAVAGRGGGAALLDNLLIAFLRKIERPAPVAGHVADEGEGQEALLLLHAAGDRQGSARERPAPEGRSPRLEHMYGSTSDGDGVTEYVYANGVVDYVRDVVVNGVAHEVLEKRNFPRGAGASKQDAAAASEKEFEGE----XXXXXXXXXXXXXXXXXXXXXXFGTRSSSYSSAPLSSSTVLPANNKRFRGPLSSSGYADTSGLYRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR----DTAERRRSAHGAVDSSTSPSRSFGGMLGNLFRGTFAGLLQSREEGSGERSSPVFEGEDDXXXXXGEDARLFGAAEWSGRSAQARXXXXXXXXXXXXXXXXXXXXXXXXXGNYQVEIVASTGDTSXXXXXXXYRLEVGTVVPGQSLPSSSLLAFGTINE 729          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18599.5822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHQ5_ECTSI1.990e-29679.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L752_9PHAE4.640e-27878.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18599contigEcto-sp13_S_contig18599:484..3318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18599.5822.1mRNA_Ecto-sp13_S_contig18599.5822.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18599 484..3318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18599.5822.1 ID=prot_Ecto-sp13_S_contig18599.5822.1|Name=mRNA_Ecto-sp13_S_contig18599.5822.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=722bp
SAAAAAAAGRTAPVSTRHRKRERRSGERFHQGGGRGAAAGAGEGTAAVAA
ASWFRGDVQEPAADTAHAASGSADGGAQSVGGVRRDGVAARGLLEGMEEE
PDLAAIFLRMIGMQPNLSQHSDGAVVASPAAAEGEETTGTGLAVHKRSWR
FEDGKSDQEFAEKLIAGLDGPQREDLASKLIAELGQAGEQDLADTLLVGL
EEAKDREDFATALAGAFDTAGRGGGGGELAEKLLSGLERDGEGQAQAATL
LAGLDAADRHELAGALVDGLRRAGQDDRAHELVAGMDSARDEEELAEVVA
AAFGSVRKQVAVAGQGGGAELLDNLLIAFLRKIERPTPVAGHVADEGNGQ
EALLLLHAAGDRQESPRERSAPEGRLPRLKPTYGSTSDGDGLTKYVHSNR
VMDYVREVVVNGVAHGVLEKRTFPRRAGASKQDAAAASEKEVEGEEADNF
IFDDDDANFLTSRSDDDGASSFGTRSSSFSSASSSSPTVLPANNKRFRGP
LSSSGYADTSGLYRGGRGGDGGSGSGGEGTFFTSTTLLEGEEEGIEVPDA
QRPGGGYPLLPRPPARDTAERRRSAHGAVDSSWPSRSFGGMLGDLFRGTF
AGLLQSREEGSGERSSPVFEEEEDKEEQDEDARMFGAAEWSWRSAQARRR
RLYTSSSAGTTASSSDDDNDNSSGNYQVEIVASTGDTSTNWNGASYRLEV
GTVVPGQTLPSSSLLAFGTINE
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