prot_Ecto-sp13_S_contig1857.5813.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1857.5813.1
Unique Nameprot_Ecto-sp13_S_contig1857.5813.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length275
Homology
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Match: A0A6H5JKW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW2_9PHAE)

HSP 1 Score: 537 bits (1384), Expect = 7.000e-193
Identity = 265/274 (96.72%), Postives = 270/274 (98.54%), Query Frame = 0
Query:    1 MSWAAVWTPLWIADSIGLMFFVFLVSWGPIRAPAEWQGEWRDPYPMSMRVLALVKWGLLVLFQVTLVLRLDRHISWSWEEVLAPLMAWVCLRIVGELYRIVLQTKRLFVGRVIAAIKAIGEAAMLFLQVLFLMWRLDGEVDWNWWVVFIPTWLLHAGQLFTWCTNQALAMSLARGLEDHEGSTEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFAVTCLVCFAERRARQEEADGAEGEGFNTDV 274
            MSWAAVWTPLWIADSIGLMFFVFLVSWGPI+APAEWQGEWRDPYPMSMRVLALVKWGLLVLFQV LVLRLD HISWSWEEVLAPLMAWV LRI+GELYRIVLQTKRLFVGRV+AAIKA+GEAAMLFLQVLFLMWRLDGEV WNWWVVF+PTWLLHAGQLFTWCTNQALAMSLARGLEDHEGSTEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFAVTCLVCFAERRARQEEADGAEGEGFNTDV
Sbjct:    1 MSWAAVWTPLWIADSIGLMFFVFLVSWGPIKAPAEWQGEWRDPYPMSMRVLALVKWGLLVLFQVLLVLRLDHHISWSWEEVLAPLMAWVWLRIIGELYRIVLQTKRLFVGRVVAAIKAMGEAAMLFLQVLFLMWRLDGEVAWNWWVVFVPTWLLHAGQLFTWCTNQALAMSLARGLEDHEGSTEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFAVTCLVCFAERRARQEEADGAEGEGFNTDV 274          
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Match: D8LBY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY5_ECTSI)

HSP 1 Score: 530 bits (1366), Expect = 7.260e-189
Identity = 261/274 (95.26%), Postives = 268/274 (97.81%), Query Frame = 0
Query:    1 MSWAAVWTPLWIADSIGLMFFVFLVSWGPIRAPAEWQGEWRDPYPMSMRVLALVKWGLLVLFQVTLVLRLDRHISWSWEEVLAPLMAWVCLRIVGELYRIVLQTKRLFVGRVIAAIKAIGEAAMLFLQVLFLMWRLDGEVDWNWWVVFIPTWLLHAGQLFTWCTNQALAMSLARGLEDHEGSTEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFAVTCLVCFAERRARQEEADGAEGEGFNTDV 274
            MSWAAVWTPLWI D IGLMFFVF+VSWGPI+APAEWQGEWRDPYPMSMRVLALVKWGLLVLFQV LVLRLDRHISWSWEEVLAPLMAWV LRI GELYRIVLQTKRLFVGRVIAAIKA+GEAAMLFLQVLFLMWRLDGEV+WNWWVVF+PTWLLHAGQLFTWCTNQALAMSLARGLED++GSTEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTF VTCLVCFAERRARQEEADGAEGEGFNTDV
Sbjct:   81 MSWAAVWTPLWITDGIGLMFFVFIVSWGPIKAPAEWQGEWRDPYPMSMRVLALVKWGLLVLFQVLLVLRLDRHISWSWEEVLAPLMAWVWLRIAGELYRIVLQTKRLFVGRVIAAIKAMGEAAMLFLQVLFLMWRLDGEVNWNWWVVFVPTWLLHAGQLFTWCTNQALAMSLARGLEDNDGSTEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFVVTCLVCFAERRARQEEADGAEGEGFNTDV 354          
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Match: A0A6H5K446_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K446_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 1.810e-58
Identity = 111/275 (40.36%), Postives = 166/275 (60.36%), Query Frame = 0
Query:    2 SWAAVWTPLWIADSIGLMFFVFLVSWGPIRAPAEWQGEWRDPYPMSMRVLALVKWGLLVLFQVTLVLRLDRHISWSWEEVLAPLMAWVCLRIVGELYRIV-----------------------LQTKRLFVGRVIAAIKAIGEAAMLFLQVLFLMWRLDGEVDWNWWVVFIPTWLLHAGQLFTWCTNQALAMSLARGLED--HEGSTEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFAVTCLVC 251
            SW A+WTPLWI D++GL +F++L+S G I+AP   +  W DP+P+ +RVLALVKW LL LFQV L ++LD  I WS+  V +PL+AW+ L IVG +Y                          ++ +   + +   A  A+ +  +  LQ++FL+ +LDG+VDWNWW+VF+PTW++  GQL  +  + +LA +L+ G+E    E  T+E+R +++ AS L+ +A         T+VT VLAV  +AGADYS F++F+PQF  A       TC +C
Sbjct:  152 SWVALWTPLWIYDALGLWYFMYLISLGQIKAPEGMEEGWTDPFPLPLRVLALVKWTLLFLFQVFLTMQLDGDIDWSYAVVGSPLLAWMGLLIVGHVYDATRPVPQDRSEESILNAEEEGIPPDVEKREQAIAKRSEARTAVAKDCIWMLQLVFLIIKLDGDVDWNWWLVFLPTWIVLFGQLVGYYVDYSLARNLSAGIEGKAEEELTQEERVRMVAASQLLVHASXXXXXWVFTVVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFIC 426          
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Match: A0A7S4UY41_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UY41_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 1.570e-18
Identity = 64/212 (30.19%), Postives = 100/212 (47.17%), Query Frame = 0
Query:    2 SWAAVWTPLWIADSIGLMFFVFLVSWGPIRAPAEW-QGEWRDPYPMSMRVLALVKWGLLVLFQVTLVLRLDRHISWSWEEVLAPLMAWVC-----------LRIV---------GELYRIVLQTKRLFVGRVIAAIKAIG----EAA-------------MLF--LQVLFLMWRLDGEVDWNWWVVFIPTWLLHAGQLFTWCTNQALAMSLA 173
             W  V TPLWI D + L +   ++  GP + P    Q EW DP PM  R+ +L ++ LLV+F++ + LRLD    W W  +  PL  W C           +RIV         G+ +    Q ++  + +    + +      EAA             ++F  + ++FL+++LD E+D NWWVVF+P WL+     F  C N A   ++A
Sbjct:  159 EWTTVLTPLWIWDLVILFYHFRVIMMGPFKKPDHIPQEEWVDPLPMPKRIFSLFRFCLLVIFEILVALRLDDAFQWKWYFIFIPLYIWECTMVYKKVPLAKMRIVTVEDLENALGKPFAEFTQAEKDLISKKYTVVPSTSSPQFEAAYKVKTRARQDVVKLIFRVVFIIFLVFQLDTEMDMNWWVVFVPLWLMSFCICFANCQNFAEVQAMA 370          
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Match: A0A7S2U8A7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U8A7_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.420e-18
Identity = 58/193 (30.05%), Postives = 91/193 (47.15%), Query Frame = 0
Query:    2 SWAAVWTPLWIADSIGLMFFVFLVSWGPIRAPAEW-QGEWRDPYPMSMRVLALVKWGLLVLFQVTLVLRLDRHISWSWEEVLAPLMAWVC-----------LRIV---------GELYRIVLQTKRLFVGRVIAAIKAIG-------------------EAAMLFLQVLFLMWRLDGEVDWNWWVVFIPTWLL 154
            SW AV TPLW+ D++ L++   ++  GPI  P    Q EW DP PMS R+ +L ++ L+V+F+V   LRLD+HI W W E+  P+  W             ++IV         G+ +      ++  + R  + + +                     + A   L   FL+  LD  +DWNWW VF+P W++
Sbjct:  123 SWLAVLTPLWVWDAVILLYHSRVIMLGPIPKPDHIPQEEWVDPLPMSKRIFSLFRFLLVVIFEVLGALRLDKHIDWKWSEIFIPVYIWETTTFYKKWPIARMKIVTVEDLETALGKSFAEFTAAEKELISRRYSVVPSTSCPEFDVAHKVKSRARQDLIKLAFRILFYAFLITELDTNLDWNWWGVFVPFWIM 315          
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Match: A0A7S1UVB4_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UVB4_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 3.640e-18
Identity = 100/345 (28.99%), Postives = 144/345 (41.74%), Query Frame = 0
Query:    2 SWAAVWTPLWIADSIGLMFFVFLVSWGPIRAPAEWQGE-WRDPYPMSMRVLALVKWGLLVLFQVTLVLRLDRHIS-WSWEEVLAPLMAW-----------VCLRIV------------------------GELYRIVLQTKRL-FVGRVIAAIKAIGEAAMLFLQVLF---LMWRLDGEVDWNWWVVFIPTWLLHAGQLFTWCTNQALAMSLARGLEDH-----------------------EGS-----TEEQRRKLLEASVLMDNAKHSRKLL--GGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFAVTCLVCFAERRARQEEADGAEGE-GFNTDV 274
            +WA    PLWI D+    +   ++  GPI  P     E W DP PMS R+ +L ++GLLVLFQV +VLRLD  +S W W  V  PL  W             +RIV                        G+ Y +V  T    F       ++A  +      +++F   L+ +LDG VDWNWW +F P W++    LF +   QA A      +E                         +G      TEE+R +L +A V+  +++   K    G  L+  +L V  V GA YS+F +  P    A      + C + FA     +   DG E + G +TDV
Sbjct:  158 TWAGTLLPLWIWDAFIFFYHSRVIMMGPIPRPDHISPEDWVDPLPMSKRIFSLARFGLLVLFQVLMVLRLDGVVSSWPWAVVFGPLYIWEFTTLWKKWPLARMRIVTVEDLETALGKPFSEFTVAEKELIGQRYSVVPSTTSPEFEAAQKLKVRARHDMIKSGFRIVFCVLLLCQLDGRVDWNWWFIFTPFWVMTL--LFCYANYQAFAEVQQMAMEKDPTLFGNIPPNQQQQQVGAFPTGKDGQPISPLTEEEREEL-KAHVMASSSRLCSKCCSQGFLLMIVLLFVGKVQGAGYSSFWILSPLLTMAGM----ILCCIGFAIFGITEVPTDGVEFDTGEDTDV 495          
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Match: A0A7S3DXM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DXM8_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.920e-12
Identity = 56/193 (29.02%), Postives = 88/193 (45.60%), Query Frame = 0
Query:    2 SWAAVWTPLWIADSIGLMFFVFLVSWGPIRAPAEWQGE-WRDPYPMSMRVLALVKWGLLVLFQVTLVLRLDRHISWSWEEVLAPLMAWVC-----------LRIV---------GELYRIVLQTKRLFVGRVIAAIKAIG----EAAM-------------LF--LQVLFLMWRLDGEVDWNWWVVFIPTWLL 154
            SW A   PLW  D+  L + + ++  GPI+ P     E W DP PM  R  +L ++ L+VLF++ + L+LD   +  W  +  PL  W             +RIV         G+ +    Q ++  +G+    +  +     EAA              LF  + V+ L+ +LDG  DWNWW+VF P W++
Sbjct:   62 SWFATLIPLWFWDAFILFYHIRVILMGPIQKPDHIPAEEWVDPLPMKKRFFSLARFLLIVLFELLVALKLDLIANIPWSVIFFPLYIWEATTLYKKWPLARMRIVTVEDLEQALGKPFTQFTQPEKDLIGKRYNVVPNLNCPEFEAAQKLKVRARHDIIKSLFRVVFVIVLLVQLDGNFDWNWWIVFSPFWVM 254          
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Match: A0A448ZRQ1_9STRA (J domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRQ1_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.460e-10
Identity = 48/200 (24.00%), Postives = 85/200 (42.50%), Query Frame = 0
Query:    2 SWAAVWTPLWIADSIGLMFFVFLVSWGPIRAP-AEWQGEWRDPYPMSMRVLALVKWGLLVLFQVTLVLRLDRHISWSWEEVLAPLMAWVCLRI-----VGELYRIVLQTKRLFVGRVIA----------------------------------AIKAIGEAAMLFLQVLFLMWRLDGEVDWNWWVVFIPTWLLHAGQLFT 161
            SW+    PLWI +++ L +   +++   + AP      EW DP+PM  R+ +L ++ LLV  ++ L L+LD  +  +W  V  P+  W    +     +  L  + ++     +G+ +                                   A + + ++A   + +  L  RLD   DWNWW+VF+P W+L  G   T
Sbjct:  162 SWSVTLVPLWIWNAMALFYHSRVLTMPTVSAPDGVPPEEWIDPFPMKDRIRSLFRFLLLVSAEILLALKLDEVLECAWGLVFLPVYLWEAANVHEQWPLSRLRTLTVEDLEAALGKPLGECTADETEAIRRAYVVVPSAESPEFAEAEERKARAARELAKSAARAIVLSALAVRLDTRADWNWWLVFLPVWILSLGACLT 361          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1857.5813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JKW2_9PHAE7.000e-19396.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBY5_ECTSI7.260e-18995.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K446_9PHAE1.810e-5840.36J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A7S4UY41_9STRA1.570e-1830.19Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2U8A7_9STRA2.420e-1830.05Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S1UVB4_9STRA3.640e-1828.99Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S3DXM8_9STRA2.920e-1229.02Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A448ZRQ1_9STRA3.460e-1024.00J domain-containing protein n=1 Tax=Pseudo-nitzsch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019396Transmembrane Fragile-X-F-associated proteinPFAMPF10269Tmemb_185Acoord: 1..163
e-value: 4.7E-10
score: 39.6
IPR019396Transmembrane Fragile-X-F-associated proteinPANTHERPTHR13568FAM11A, B PROTEINcoord: 54..104
coord: 1..87
coord: 123..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 206..222
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 223..227
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..252
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..141
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 253..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..205
NoneNo IPR availableTMHMMTMhelixcoord: 206..223
NoneNo IPR availableTMHMMTMhelixcoord: 144..163
NoneNo IPR availableTMHMMTMhelixcoord: 228..250
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1857contigEcto-sp13_S_contig1857:9169..14652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1857.5813.1mRNA_Ecto-sp13_S_contig1857.5813.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1857 7717..15275 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1857.5813.1 ID=prot_Ecto-sp13_S_contig1857.5813.1|Name=mRNA_Ecto-sp13_S_contig1857.5813.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp
MSWAAVWTPLWIADSIGLMFFVFLVSWGPIRAPAEWQGEWRDPYPMSMRV
LALVKWGLLVLFQVTLVLRLDRHISWSWEEVLAPLMAWVCLRIVGELYRI
VLQTKRLFVGRVIAAIKAIGEAAMLFLQVLFLMWRLDGEVDWNWWVVFIP
TWLLHAGQLFTWCTNQALAMSLARGLEDHEGSTEEQRRKLLEASVLMDNA
KHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFAVTCLV
CFAERRARQEEADGAEGEGFNTDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019396TM_Fragile-X-F-assoc