prot_Ecto-sp13_S_contig18515.5781.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18515.5781.1
Unique Nameprot_Ecto-sp13_S_contig18515.5781.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length155
Homology
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 1.230e-98
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLEVR 155
            MHGPAESKARMYRERFLMVRQRV RHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLS+AHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLE++
Sbjct:  117 MHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSNAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLELK 271          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA)

HSP 1 Score: 158 bits (400), Expect = 3.910e-43
Identity = 76/153 (49.67%), Postives = 110/153 (71.90%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLE 153
            +H   E+K  M R+R L+++QR  RH+LFR P+I SSR++ IKL+ LDSL+GS   + ++GMLTQP EG Y +ED   ++P+D+S A  T G+FTE+CVV+ EG+M  G F++ M+GFPP E R+ +  A+G+ DLFGTG+  QQ+E +  LE
Sbjct:  117 LHAGPEAKGEMLRDRLLLMQQRTQRHELFRAPVIASSRKDTIKLTSLDSLLGSHGGKCIMGMLTQPSEGAYHIEDLTCQVPIDVSGAGYTAGMFTENCVVVAEGEMVDGAFRIDMMGFPPPELRKATALAIGQPDLFGTGMTHQQVELLDNLE 269          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: A0A7S1GD26_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD26_9STRA)

HSP 1 Score: 157 bits (397), Expect = 9.880e-43
Identity = 74/153 (48.37%), Postives = 110/153 (71.90%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLE 153
            +H PAE+   M+RER+ +V QRV R+ +F PP++ SS+REY +L+PL+SL+G+   +++LGML QPEEG+Y +ED+ +R+P+DLS A  T GLFTE  +V+ +G++  G F VAM+GFPP E R DSL A+G  D  G    P ++ +++ LE
Sbjct:  159 LHCPAETNIAMWRERYQLVEQRVLRNAMFSPPVLGSSKREYFQLTPLESLLGTTGTKYVLGMLVQPEEGRYCIEDQSSRVPIDLSAASTTSGLFTECSIVLAQGELREGTFHVAMMGFPPPEKRVDSLLAMGTVDPMGLLTTPHELRKVQALE 311          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: A0A7S4I565_9STRA (DNA polymerase epsilon subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I565_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.880e-32
Identity = 67/164 (40.85%), Postives = 109/164 (66.46%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIK------LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAH-KTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALG--RADLFGTGVNPQQMERMRQLEVR 155
            +   A  KA MY +R+ +++QR+ R DLFRP ++ +  R   +      L+P++SL+G + L++LLGM+ Q EEG+Y+LED   ++P+DL+ A   T+G  TE+C+V+VEG+M  G+FQV  +G P IE R+D+L A+G    D+F +  +  + E+MR+ E+R
Sbjct:  127 LFAEAPHKADMYAQRYGLIQQRILRQDLFRPRLVTADGRRSDESNATHVLTPVESLLGQSGLKFLLGMIVQVEEGRYYLEDTTAQVPMDLTGAEILTDGFITENCIVLVEGEMVDGIFQVVRMGHPIIETRQDALDAIGLQNTDIFNSMSSLAEQEKMREQEIR 290          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: A0A3Q7Y3K5_CICAR (DNA polymerase epsilon subunit B-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A3Q7Y3K5_CICAR)

HSP 1 Score: 121 bits (303), Expect = 4.470e-32
Identity = 58/143 (40.56%), Postives = 93/143 (65.03%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREY--IKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTA-GVFQVAMVGFPPIEAREDSLRALGRADLFGTG 140
            +HG A +K  +YR+ FL++ QR+ RH  F  P  ES   ++   ++SP+ SLVG    RW++G+++Q E+G ++LED    + ++LSDA+ T GLF E+ +V+ EG+M   G+F++   GFPP+E R+ SL+ +   D FG G
Sbjct:   13 IHGDAPAKTALYRDMFLLLSQRISRHQDFSRPAFESELSQFRSCEISPIQSLVGQKGRRWVMGVISQLEDGHFYLEDLTASVEINLSDANITTGLFIENTIVVAEGEMLVEGIFKILTCGFPPLEDRDKSLQVVAGQDFFGGG 155          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: A0A059AW13_EUCGR (DNA polymerase epsilon subunit n=7 Tax=Myrtoideae TaxID=1699513 RepID=A0A059AW13_EUCGR)

HSP 1 Score: 128 bits (321), Expect = 8.670e-32
Identity = 65/159 (40.88%), Postives = 105/159 (66.04%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREY--IKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTA-GVFQVAMVGFPPIEAREDSLRALGRADLFGTG-VNPQQMERMRQLEVR 155
            +HG A +KA++Y++RFL++ QR+ R   F  P  E+   E+   ++SP+ SLVG    RW++G+++Q E+G ++LED    + ++LSDA  T G FTE+ +V+VEG+M   G+F++   GFPP+E R+ SL+AL   D FG G +  ++  R+ +LE R
Sbjct:  123 IHGEASAKAKLYKDRFLLLYQRLSRDQHFAKPAFETETTEFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSDAKVTTGFFTENTIVVVEGQMLLEGIFKIFTCGFPPLEERDKSLKALAGLDFFGGGALTKEETLRLAELEKR 281          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: UPI00098DBD87 (DNA polymerase epsilon subunit B n=1 Tax=Cajanus cajan TaxID=3821 RepID=UPI00098DBD87)

HSP 1 Score: 124 bits (311), Expect = 2.080e-30
Identity = 63/143 (44.06%), Postives = 92/143 (64.34%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREY--IKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTA-GVFQVAMVGFPPIEAREDSLRALGRADLFGTG 140
            +HG A +KA +YR+RFL++ QR+ R   F  P  ES    +   ++SP+ SLVG    RW++G+++Q E+G Y+LED    + + LS+A  T GLFTE+ +V+VEG+M   G+FQV   GFPP+E R+ SL+     D FG G
Sbjct:  117 IHGEASAKAALYRDRFLLLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQPGRRWVMGVISQLEDGHYYLEDLTAAVKISLSNAKITTGLFTENTIVVVEGEMLVEGIFQVLTCGFPPLEDRDKSLKLFAGHDYFGCG 259          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: A0A1S4DTQ5_CUCME (DNA polymerase epsilon subunit n=5 Tax=Cucurbitaceae TaxID=3650 RepID=A0A1S4DTQ5_CUCME)

HSP 1 Score: 124 bits (310), Expect = 3.020e-30
Identity = 60/148 (40.54%), Postives = 96/148 (64.86%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREY--IKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTA-GVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQ 145
            +HG A +KA +YR+RFL++ QR+ R   F  P  +     +   ++SP+ SLVG    +W++G+++Q E+G ++LED    + ++LS+A  T GLFTE+ +++ EG+M   G+FQV   GFPP+E R+ SL+ L   D FG GV P++
Sbjct:  123 IHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERDKSLKLLAGQDFFGGGVLPKE 270          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: F0W3F7_9STRA (DNA polymerase epsilon subunit n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3F7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 4.460e-30
Identity = 63/154 (40.91%), Postives = 101/154 (65.58%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLF-RPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLE 153
            +HG A+ + ++ R RFL V  RV R+ +F +PP +  +  EYI+LS +DSL+G   ++ ++GML Q +  + +LED  +R+ LDL++A  TEGLFT +C V+VEG++   +  V  +GFPP E + +S+  L   D  G  ++ QQ+E+M+QLE
Sbjct:  112 LHGTAQDRLQVLRNRFLSVEWRVKRNPIFSKPPSVLGTTTEYIELSNIDSLLGINGIKRVIGMLGQDDRKRTYLEDLTSRIYLDLTEATYTEGLFTTNCTVLVEGEVINDILHVHSMGFPPPETKAESMNVLNGIDPLGVKISDQQLEQMQQLE 265          
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Match: UPI001E690656 (DNA polymerase epsilon subunit B n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E690656)

HSP 1 Score: 122 bits (307), Expect = 7.970e-30
Identity = 62/159 (38.99%), Postives = 102/159 (64.15%), Query Frame = 0
Query:    1 MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREY--IKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVVIVEGKMTA-GVFQVAMVGFPPIEAREDSLRALGRADLFGTGV-NPQQMERMRQLEVR 155
            +HG A++K+ +YR+RFL++ QR+ RH  F  P  ES   ++   ++SP+ SLVG    RW++G+++Q E+G ++LED    + ++LSDA  T G F E+ +V+ EG+M   G+F++   GFPP+E R+ SL+ L   D FG G    ++  R+ ++E R
Sbjct:  123 IHGDAQAKSALYRDRFLLLSQRLSRHQDFSRPAFESELSQFRSCEISPIQSLVGQKGRRWVMGVISQLEDGHFYLEDLTASVEINLSDAKITTGFFLENTIVVAEGEMLVEGIFKIFTCGFPPLEDRDKSLQVLAGHDFFGGGTFTKEETIRLEEMEKR 281          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18515.5781.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD49_ECTSI1.230e-9897.42DNA polymerase epsilon subunit n=1 Tax=Ectocarpus ... [more]
A0A835YQA3_9STRA3.910e-4349.67DNA polymerase epsilon subunit n=1 Tax=Tribonema m... [more]
A0A7S1GD26_9STRA9.880e-4348.37DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bic... [more]
A0A7S4I565_9STRA3.880e-3240.85DNA polymerase epsilon subunit n=1 Tax=Odontella a... [more]
A0A3Q7Y3K5_CICAR4.470e-3240.56DNA polymerase epsilon subunit B-like n=1 Tax=Cice... [more]
A0A059AW13_EUCGR8.670e-3240.88DNA polymerase epsilon subunit n=7 Tax=Myrtoideae ... [more]
UPI00098DBD872.080e-3044.06DNA polymerase epsilon subunit B n=1 Tax=Cajanus c... [more]
A0A1S4DTQ5_CUCME3.020e-3040.54DNA polymerase epsilon subunit n=5 Tax=Cucurbitace... [more]
F0W3F7_9STRA4.460e-3040.91DNA polymerase epsilon subunit n=1 Tax=Albugo laib... [more]
UPI001E6906567.970e-3038.99DNA polymerase epsilon subunit B n=1 Tax=Trifolium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016266DNA polymerase epsilon, subunit BPANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 1..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18515contigEcto-sp13_S_contig18515:40..2719 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18515.5781.1mRNA_Ecto-sp13_S_contig18515.5781.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18515 40..2746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18515.5781.1 ID=prot_Ecto-sp13_S_contig18515.5781.1|Name=mRNA_Ecto-sp13_S_contig18515.5781.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=155bp
MHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSL
VGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSDAHKTEGLFTEHCVV
IVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMR
QLEVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016266POLE2