prot_Ecto-sp13_S_contig18482.5763.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18482.5763.1
Unique Nameprot_Ecto-sp13_S_contig18482.5763.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length211
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18482.5763.1 vs. uniprot
Match: D7FHZ2_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ2_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 1.100e-102
Identity = 192/214 (89.72%), Postives = 196/214 (91.59%), Query Frame = 0 
Query:    1 FSVSSGAGQTRELVVKQAERVARHMLVAGISKLEERISDDEREYEAKAAERQKEXXXXXXXXXEAAIQNVVSGASSKLSGNLFDRMQGLAKLHESAKSAMKFELGQLANVGKGAGKAALANGGI---VHRHKTLKDDDLVPDDSVDNGEQEEVEDVVGGEGLDLSYLWAVDAGKVLSRSKKSTSDTEDSSHIAKGGTTTDSEVKNQYGRAGYDK 211
            FSVSSGAGQTRELVVKQAERVARH LVA ISKLEERISDDEREYEAKAAERQKEXXXXXXXXXEAAIQNVVSGASSKLSGNLFDRMQGLAKLHESAKSAMKFELGQLANVGKGAGKA  ANGG    VHRHKTLKDDDLVPDDSVDNGEQEEVEDV+GGEGLDLSYLW VDAGKVLSRS KSTSDTE SSH AKGGTTTDSE + +  R G D+
Sbjct:    3 FSVSSGAGQTRELVVKQAERVARHTLVADISKLEERISDDEREYEAKAAERQKEXXXXXXXXXEAAIQNVVSGASSKLSGNLFDRMQGLAKLHESAKSAMKFELGQLANVGKGAGKATPANGGSSTSVHRHKTLKDDDLVPDDSVDNGEQEEVEDVLGGEGLDLSYLWVVDAGKVLSRSNKSTSDTEGSSHTAKGGTTTDSEQEAEQRRPGDDR 216
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18482.5763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHZ2_ECTSI1.100e-10289.72C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18482contigEcto-sp13_S_contig18482:1037..3227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18482.5763.1mRNA_Ecto-sp13_S_contig18482.5763.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18482 1037..3227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18482.5763.1 ID=prot_Ecto-sp13_S_contig18482.5763.1|Name=mRNA_Ecto-sp13_S_contig18482.5763.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp
FSVSSGAGQTRELVVKQAERVARHMLVAGISKLEERISDDEREYEAKAAE
RQKEQRRKEQELKEAAIQNVVSGASSKLSGNLFDRMQGLAKLHESAKSAM
KFELGQLANVGKGAGKAALANGGIVHRHKTLKDDDLVPDDSVDNGEQEEV
EDVVGGEGLDLSYLWAVDAGKVLSRSKKSTSDTEDSSHIAKGGTTTDSEV
KNQYGRAGYDK
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