prot_Ecto-sp13_S_contig1842.5734.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1842.5734.1
Unique Nameprot_Ecto-sp13_S_contig1842.5734.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length108
Homology
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A6H5KCB3_9PHAE (zf-Tim10_DDP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCB3_9PHAE)

HSP 1 Score: 200 bits (508), Expect = 8.250e-65
Identity = 98/107 (91.59%), Postives = 98/107 (91.59%), Query Frame = 0
Query:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLAXXXXXXXXXAAGGVPGVPGR 107
            MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLA         AAGGVPGVPGR
Sbjct:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLAAQQGGAGGPAAGGVPGVPGR 107          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A7S1BN48_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN48_9STRA)

HSP 1 Score: 106 bits (265), Expect = 9.710e-28
Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLA 87
            M++F   E E P+GP P++ AK E++MY+DLF KMS  CF KC  K H E DL +GEMSCVDRCV KYMEAQE++GV+ ++  E  A
Sbjct:    1 MNFFSGKE-EKPAGPDPVEAAKAEIEMYTDLFNKMSASCFSKCSSKKHKEPDLALGEMSCVDRCVGKYMEAQERIGVVFQKFNEEQA 86          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A448YV82_9STRA (zf-Tim10_DDP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV82_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.100e-27
Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLA 87
            M++FG  E   P+GP P+  AK E++MY+DLF K++  CF KC  + H E DL++GEM+C DRCVSKY+E QE++GV+L++A E  A
Sbjct:    1 MNFFGGGEEAKPAGPDPVFAAKTEMEMYTDLFNKIASTCFSKCASRKHKEPDLSLGEMTCADRCVSKYLEGQERIGVVLQKANEEQA 87          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A6U0JD31_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0JD31_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.210e-27
Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 0
Query:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLA 87
            M++FG  E +P  GP P+  A  E++MY+DLF K+SG CF+KC  + H + DL +GEM+C DRCVSKYMEA EKVGV+L++A E  A
Sbjct:    1 MNFFGGGEAQP-QGPDPLFAATSEMEMYADLFQKISGTCFEKCASRRHRDGDLALGEMACTDRCVSKYMEAMEKVGVVLQKANEQQA 86          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A6U1NEZ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NEZ7_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.620e-27
Identity = 49/86 (56.98%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESL 86
            MS FG   P   SGPS +D+AK E++MY+DLF  M+ +CFKKC      E++LNVGEMSCVDRC  KY+EA +KVG +LKR EE +
Sbjct:    1 MSLFGGGAPAA-SGPSALDVAKAEMEMYTDLFNNMATICFKKCAASKIKEAELNVGEMSCVDRCTGKYIEAHQKVGEVLKRVEEQM 85          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A7S2HYG5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYG5_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.380e-26
Identity = 47/84 (55.95%), Postives = 64/84 (76.19%), Query Frame = 0
Query:    4 FGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLA 87
            FG  E +P +GP P+  A  E++MY+DLF KM+  CF+KC  K H +SDL +GEMSC DRCV+KY+EAQEK+GVI+++A E+ A
Sbjct:   50 FGTEEKQP-AGPEPLFAATTEMEMYTDLFNKMASSCFQKCASKKHKDSDLALGEMSCTDRCVAKYLEAQEKIGVIIQKANEAQA 132          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A1E7FWV3_9STRA (Mitochondrial import inner membrane translocase subunit tim10 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWV3_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.090e-26
Identity = 43/86 (50.00%), Postives = 63/86 (73.26%), Query Frame = 0
Query:    2 SWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLA 87
            ++FG  E + P GP P+  AK E++MY+DLF K++  CF+KC  + H E DL++GEM+C DRCVSKY+E Q+ +GV+L++A E  A
Sbjct:    3 NFFGGGEEQKPQGPDPVFAAKTEMEMYTDLFNKIASECFQKCASRKHKEPDLSLGEMTCTDRCVSKYLEGQQLIGVVLQKANEQQA 88          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A7S0Y8N1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0Y8N1_9STRA)

HSP 1 Score: 101 bits (251), Expect = 9.780e-26
Identity = 45/85 (52.94%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEES 85
            M++FG  E +P  GP P+  AK E++MY+DLF K++  CF KCV + H E DL++GEM+C DRCVSKY+E Q+ VGV+L++A E+
Sbjct:    1 MNFFGGEEAQP-QGPDPVFAAKTEMEMYTDLFNKIASTCFSKCVNRKHKEPDLSLGEMTCTDRCVSKYLEGQQIVGVVLQKANEA 84          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A7S0GCN6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GCN6_9STRA)

HSP 1 Score: 101 bits (251), Expect = 1.030e-25
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 0
Query:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLA 87
            M +FG  E   P+GP PM  A  E++MY+DLF KMS  CF+KC    H + +L +GEM CVDRCV+KY+E QEKVG++L++A E+ A
Sbjct:    1 MGFFGQEEK--PAGPDPMFAATTEMEMYTDLFNKMSASCFEKCASTRHKDDELALGEMGCVDRCVAKYLETQEKVGIVLQKANEAQA 85          
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Match: A0A6T5YYM4_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6T5YYM4_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.430e-25
Identity = 46/87 (52.87%), Postives = 65/87 (74.71%), Query Frame = 0
Query:    1 MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGESDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLA 87
            MS+FG  + +P  GP PM  A+ E++MY+DLF K++  CF+KC    H E D+++GEMSC DRCV+KY+E+QE+VG IL++A ES A
Sbjct:    1 MSFFGGGQAQP-QGPDPMFAAQTEMEMYTDLFNKIARSCFQKCASTRHREPDISLGEMSCTDRCVAKYLESQERVGKILQKANESQA 86          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1842.5734.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCB3_9PHAE8.250e-6591.59zf-Tim10_DDP domain-containing protein n=2 Tax=Ect... [more]
A0A7S1BN48_9STRA9.710e-2856.32Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448YV82_9STRA1.100e-2751.72zf-Tim10_DDP domain-containing protein n=1 Tax=Pse... [more]
A0A6U0JD31_9STRA2.210e-2755.17Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A6U1NEZ7_9STRA5.620e-2756.98Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2HYG5_9STRA6.380e-2655.95Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7FWV3_9STRA7.090e-2650.00Mitochondrial import inner membrane translocase su... [more]
A0A7S0Y8N1_9STRA9.780e-2652.94Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S0GCN6_9STRA1.030e-2552.87Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6T5YYM4_9STRA1.430e-2552.87Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004217Tim10-likePFAMPF02953zf-Tim10_DDPcoord: 21..76
e-value: 1.2E-16
score: 60.1
IPR035427Tim10-like domain superfamilyGENE3D1.10.287.810coord: 16..91
e-value: 4.8E-24
score: 85.6
IPR035427Tim10-like domain superfamilySUPERFAMILY144122Tim10-likecoord: 25..79
IPR027100Mitochondrial import inner membrane translocase subunit Tim10PANTHERPTHR11038:SF16MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 18..84
NoneNo IPR availablePANTHERPTHR11038MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10coord: 18..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1842contigEcto-sp13_S_contig1842:11550..15016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1842.5734.1mRNA_Ecto-sp13_S_contig1842.5734.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1842 8970..15016 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1842.5734.1 ID=prot_Ecto-sp13_S_contig1842.5734.1|Name=mRNA_Ecto-sp13_S_contig1842.5734.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=108bp
MSWFGNSEPEPPSGPSPMDLAKQEVDMYSDLFTKMSGLCFKKCVVKMHGE
SDLNVGEMSCVDRCVSKYMEAQEKVGVILKRAEESLAAQQGGGGGPAAGG
VPGVPGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004217Tim10-like
IPR035427Tim10-like_dom_sf
IPR027100Tim10