prot_Ecto-sp13_S_contig18397.5717.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18397.5717.1
Unique Nameprot_Ecto-sp13_S_contig18397.5717.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length70
Homology
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A6H5JZR4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZR4_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 4.950e-41
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            +HGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY
Sbjct:  275 IHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 343          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A6S9LH47_HETAK (E3 ubiquitin-protein ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LH47_HETAK)

HSP 1 Score: 92.8 bits (229), Expect = 4.610e-23
Identity = 47/69 (68.12%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            +HGRRAAYFPSPYVDAYGER +  FRGRPLYLD RR  VV  LW  H V  EV Q R T RQVII  +Y
Sbjct:   32 LHGRRAAYFPSPYVDAYGERHKQ-FRGRPLYLDARRLAVVAALWRAHGVPREVAQRRGTHRQVIITGYY 99          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: K8YUN0_NANGC (E3 ubiquitin-protein ligase n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUN0_NANGC)

HSP 1 Score: 83.2 bits (204), Expect = 5.160e-17
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    5 RAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            RA YFPSPYVD YGER +  FRGRPL+LD+RR + +R +W K  V +EVVQ RSTS+ VI+ ++Y
Sbjct:  775 RACYFPSPYVDVYGERHKQ-FRGRPLHLDERRLEALRRVWAKQRVPYEVVQARSTSKHVILTNYY 838          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A7S2H0X4_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H0X4_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.450e-16
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0
Query:    1 MHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            +HG RA YF SPYVDA+GER    FRGRPL+LD  R +V+R L   H V  +VV +RSTSRQVIIN +Y
Sbjct:  234 IHGPRACYFASPYVDAHGERHAQ-FRGRPLFLDPNRLEVLRLLAASHEVPAKVVHSRSTSRQVIINSYY 301          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A835YQN3_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN3_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 8.640e-16
Identity = 39/67 (58.21%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    3 GRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            G+RAAYF SPYVDAYGER R   RGRPL++D+RRY V+R L+ +H VA EV + RS+ R+V+   +Y
Sbjct: 1703 GKRAAYFASPYVDAYGERHRQP-RGRPLFMDERRYSVLRDLYARHAVAAEVARIRSSGREVLHAGYY 1768          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A7S4S2Y1_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S2Y1_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.100e-15
Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 MHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            MHG +AAY  SPYVD++GE  +  +RGRPL LD  RYD+++ LW  HLV  +V+  R +SRQVII + Y
Sbjct:   40 MHGTKAAYVHSPYVDSHGETPQ--YRGRPLNLDLDRYDILQELWSGHLVRQKVIAERGSSRQVIIANFY 106          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A7R9U7G2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G2_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.180e-15
Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    1 MHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            +HG +AAYFPSPYVD+YGER R  FR  PL L+ RR++ V+ LW +H ++ EV   RST+RQVI++  Y
Sbjct: 1863 IHGSKAAYFPSPYVDSYGERHR-KFRTIPLKLEPRRWEAVQRLWAQHGISVEVAHQRSTARQVIVDSWY 1930          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A7S3HU19_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU19_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 5.630e-15
Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = 0
Query:    2 HGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            HG R+ YF SPYVD YGE Q H +RG+PLYLD RRY+ +  ++  H +  EVV  RS + ++IIN++Y
Sbjct: 2092 HGPRSLYFASPYVDVYGESQ-HQYRGKPLYLDPRRYEALTRIYNTHQIPREVVSKRSNATRIIINNYY 2158          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A7S1V6W7_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V6W7_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.150e-14
Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 MHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
             HG +AAY  SPYVD++GE  +  +RGRPL LD  RY++   +W  H V  +V+Q RS+SRQVII D +
Sbjct:   36 FHGDKAAYVQSPYVDSHGETPQ--YRGRPLNLDMDRYNIFHEMWAGHTVRQKVMQERSSSRQVIIADFF 102          
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Match: A0A7S2SNG9_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNG9_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.600e-14
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 MHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVAHEVVQNRSTSRQVIINDHY 69
            +HG R+ YF SPYVDA+GER  H FRGRPLY D  R +V+R +  +H +  +VV  RS SRQVII ++Y
Sbjct:  477 VHGPRSCYFASPYVDAHGERHGH-FRGRPLYTDPLRINVLRDIVARHEIPIKVVHTRSISRQVIIPEYY 544          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18397.5717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZR4_9PHAE4.950e-4198.55E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp.... [more]
A0A6S9LH47_HETAK4.610e-2368.12E3 ubiquitin-protein ligase n=1 Tax=Heterosigma ak... [more]
K8YUN0_NANGC5.160e-1760.00E3 ubiquitin-protein ligase n=2 Tax=Nannochloropsi... [more]
A0A7S2H0X4_9STRA2.450e-1660.87E3 ubiquitin-protein ligase n=1 Tax=Dictyocha spec... [more]
A0A835YQN3_9STRA8.640e-1658.21E3 ubiquitin-protein ligase n=1 Tax=Tribonema minu... [more]
A0A7S4S2Y1_9STRA1.100e-1553.62E3 ubiquitin-protein ligase n=1 Tax=Ditylum bright... [more]
A0A7R9U7G2_9STRA1.180e-1555.07E3 ubiquitin-protein ligase n=1 Tax=Pinguiococcus ... [more]
A0A7S3HU19_9STRA5.630e-1551.47E3 ubiquitin-protein ligase n=1 Tax=Spumella elong... [more]
A0A7S1V6W7_9STRA1.150e-1450.72E3 ubiquitin-protein ligase n=1 Tax=Grammatophora ... [more]
A0A7S2SNG9_9STRA2.600e-1455.07E3 ubiquitin-protein ligase n=1 Tax=Rhizochromulin... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 3..63
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 3..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18397contigEcto-sp13_S_contig18397:514..1644 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18397.5717.1mRNA_Ecto-sp13_S_contig18397.5717.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18397 493..1644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18397.5717.1 ID=prot_Ecto-sp13_S_contig18397.5717.1|Name=mRNA_Ecto-sp13_S_contig18397.5717.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=70bp
MHGRRAAYFPSPYVDAYGERQRHSFRGRPLYLDQRRYDVVRGLWVKHLVA
HEVVQNRSTSRQVIINDHY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like