prot_Ecto-sp13_S_contig18385.5707.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18385.5707.1
Unique Nameprot_Ecto-sp13_S_contig18385.5707.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length378
Homology
BLAST of mRNA_Ecto-sp13_S_contig18385.5707.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.480e-37
Identity = 80/110 (72.73%), Postives = 88/110 (80.00%), Query Frame = 0
Query:    1 MCRACRSTSVLHVRVTDQTPRSLWAPRITQTRPNTRSSKLRVWSRVPVVRALRLTWALSMEILLRTAAIELWTWSECLELQGSLCAASLRSADWWPRGLTQLVLDAELDV 110
            +CRACR+TS+LHV V DQTPRSLW+ R  QTRPNTRS  L + SRVPVVRALRLTWALSME LLR AAIELWTWSE LEL GS C +SL S   WPRGLTQLVL  + D+
Sbjct:   44 LCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDI 153          
BLAST of mRNA_Ecto-sp13_S_contig18385.5707.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 2.650e-36
Identity = 76/113 (67.26%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    1 MCRACRSTSVLHVRVTDQTPRSLWAPRITQTRPNTRSSKLRVWSRVPVVRALRLTWALSMEILLRTAAIELWTWSECLELQGSLCAASLRSADWWPRGLTQLVLDAELDVPIE 113
            +CRACRST  LHVRVT  TP SLW+P   Q  PNT+SSK+RV SRVPVVRALRLTWA SME L++ AAIELW+ SE LE+ G LCAASL S  W P GLTQLVLD +  +P+E
Sbjct:   42 ICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVW-PLGLTQLVLDTDFHIPME 153          
BLAST of mRNA_Ecto-sp13_S_contig18385.5707.1 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 7.850e-30
Identity = 73/112 (65.18%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    3 RACRSTSVLHVRVTDQTPRSLWAPRITQTRPNTRSSKLRVWSRVPVVRALRLTWALSMEILLRTAAIELWTWSECLELQGSLCAASLRSADWWPRGLTQLVLDAELDVPIEN 114
            RACRSTS+LH                  TRPNT  S + V  R P V AL LTWAL ME LLRTAAIELWTWSECLELQGSLCAASLRSA+WWPR LTQLVL A+LD+  EN
Sbjct: 1086 RACRSTSILH------------------TRPNTSKSAVPVSGRAPAVWALHLTWALPMESLLRTAAIELWTWSECLELQGSLCAASLRSANWWPRRLTQLVLKADLDILTEN 1179          
BLAST of mRNA_Ecto-sp13_S_contig18385.5707.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.520e-14
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 0
Query:    2 CRACRSTSVLHVRVTDQTPRSLWAPRITQTRPNTRSSKLRVWSRVPVVRALRLTWALSMEILLRTAAIELWTWSECLELQGSLCAASLRSADWWPRGLTQLVLDAELDVPIENFP 116
            C ACR    LHVRV  QTPRSLW+P  +      RS +  V +RVP V+A  LTWAL ME+LL+T+A+EL + S+   + G+   ASL S  W    L +LV D+++     ++P
Sbjct:   51 CGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTASWP 165          
BLAST of mRNA_Ecto-sp13_S_contig18385.5707.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 7.400e-14
Identity = 51/116 (43.97%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    1 MCRACRSTSVLHVRVTDQTPRSLWAPRITQTRPNTRSSKLRVWSRVPVVRALRLTWALSMEILLRTAAIELWTWSECLELQGSLCAASLRSADWWPRGLTQLVLDAELDVPIENFP 116
            +C ACR    LHVRV  QTP SLW P    T  N RS K+ + SRVPVV+A  LTWAL M +L + +A E+ + S C        AASL SA W P+ L ++V ++++ V   ++P
Sbjct:   42 VCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVW-PQRLKRMVFESDMTVNTASWP 156          
BLAST of mRNA_Ecto-sp13_S_contig18385.5707.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.390e-10
Identity = 43/92 (46.74%), Postives = 57/92 (61.96%), Query Frame = 0
Query:    2 CRACRSTSVLHVRVTDQTPRSLWAPRITQTRPNTRSSKLRVW-----SRVPVVRALRLTWALSMEILLRTAAIELWTWSECLELQGSLCAAS 88
            CRA RS   + + V  + PRSLW  R +QT  +TR  ++R W     SRVP++RA RL W LSME LL++ A+ELWT  + L L G +  AS
Sbjct:   20 CRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDAS 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18385.5707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5LIJ3_9PHAE1.480e-3772.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7F9_ECTSI2.650e-3667.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4M0_9PHAE7.850e-3065.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLV1_9PHAE2.520e-1443.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNI6_9PHAE7.400e-1443.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL88_9PHAE1.390e-1046.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 240..283
e-value: 4.2E-8
score: 33.2
coord: 130..171
e-value: 7.2E-5
score: 22.9
coord: 328..363
e-value: 3.0E-6
score: 27.3
coord: 284..326
e-value: 1.9E-5
score: 24.7
coord: 174..216
e-value: 2.7E-8
score: 33.8
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 93..309
coord: 183..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18385contigEcto-sp13_S_contig18385:803..1936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18385.5707.1mRNA_Ecto-sp13_S_contig18385.5707.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18385 42..2700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18385.5707.1 ID=prot_Ecto-sp13_S_contig18385.5707.1|Name=mRNA_Ecto-sp13_S_contig18385.5707.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=378bp
MCRACRSTSVLHVRVTDQTPRSLWAPRITQTRPNTRSSKLRVWSRVPVVR
ALRLTWALSMEILLRTAAIELWTWSECLELQGSLCAASLRSADWWPRGLT
QLVLDAELDVPIENFPWPARLHCLELGCRFNQSVARVVWPAFLQQLSFGW
TFNQLIAGVVWPSSLEKLSFGVAFNQPIAGVVWPASLQQLSFGSRFNQPI
TGIVWPASLQQLSFGQYFNQPIAGVVWPASLQQLLFGGWFNQPVAGAEWP
SSLQNLAFGAAFDQPIAGVVWPPSLKTLSFEYKFDQLIDGAVWPASLEKL
SFGHKFNHPIAGIEWPASLKQLSFGYTFNQPIAGVVWPASLEQLSFGSSF
NQPIARVVWPRSLRCVTSDGKSLLQKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP