prot_Ecto-sp13_S_contig18329.5691.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18329.5691.1
Unique Nameprot_Ecto-sp13_S_contig18329.5691.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length49
Homology
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BLAST of mRNA_Ecto-sp13_S_contig18329.5691.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.010e-15
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 0 
Query:    1 NQTPLTAASVIGSSRVVEDLLRQGASVSVADSDGYSALHHAVYRN 45
            NQTPL  ASVIGSSRVV DLLRQGASVSVADSDG +ALHH+VY N
Sbjct:   29 NQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHN 73
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BLAST of mRNA_Ecto-sp13_S_contig18329.5691.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.200e-15
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:    1 NQTPLTAASVIGSSRVVEDLLRQGASVSVADSDGYSALHHAVYR 44
            NQTPL  ASVIGSSRVV DLLRQGASVSVADSDGY+ALHHAVY 
Sbjct:  450 NQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYH 493
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BLAST of mRNA_Ecto-sp13_S_contig18329.5691.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 5.620e-15
Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:    1 NQTPLTAASVIGSSRVVEDLLRQGASVSVADSDGYSALHHAVYR 44
            NQTPL  ASVIG SRVV DLLRQGASVSVADSDGY+ALHHAVY 
Sbjct:   35 NQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYH 78
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BLAST of mRNA_Ecto-sp13_S_contig18329.5691.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 5.720e-15
Identity = 38/44 (86.36%), Postives = 39/44 (88.64%), Query Frame = 0 
Query:    1 NQTPLTAASVIGSSRVVEDLLRQGASVSVADSDGYSALHHAVYR 44
            NQTPL  ASVIGSSRVV DLLRQGASVS+ADSDGY ALHHAVY 
Sbjct:  419 NQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYH 462
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BLAST of mRNA_Ecto-sp13_S_contig18329.5691.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.040e-14
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 0 
Query:    1 NQTPLTAASVIGSSRVVEDLLRQGASVSVADSDGYSALHHAVYR 44
            N TPL  ASVIGSSRVV+DLLRQGASVSVADSDGY+ALHH+VY 
Sbjct:   29 NHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYH 72
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18329.5691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LH66_ECTSI1.010e-1584.44EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JL58_9PHAE1.200e-1588.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5L0_9PHAE5.620e-1586.36Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE5.720e-1586.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHQ8_9PHAE1.040e-1484.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..47
e-value: 6.5E-11
score: 44.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..46
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 2..31
e-value: 2.8E-4
score: 21.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..32
score: 10.606
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..48
score: 15.088

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18329contigEcto-sp13_S_contig18329:864..1010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18329.5691.1mRNA_Ecto-sp13_S_contig18329.5691.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18329 864..1010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18329.5691.1 ID=prot_Ecto-sp13_S_contig18329.5691.1|Name=mRNA_Ecto-sp13_S_contig18329.5691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=49bp
NQTPLTAASVIGSSRVVEDLLRQGASVSVADSDGYSALHHAVYRNTWP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom