prot_Ecto-sp13_S_contig18324.5689.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18324.5689.1
Unique Nameprot_Ecto-sp13_S_contig18324.5689.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Match: A0A6H5KD35_9PHAE (CBM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD35_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 5.710e-30
Identity = 47/65 (72.31%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    1 MAECYSE---------CRPKEDRCSEGWGQCGGLHWEGPECCWPGAECIERNEWYHQCVPEGAVN 56
            MA+CYS+         CRP+ DRCSEGWGQCGGLHWEGPECCWPGAEC+ERNE +HQCVPEGA++
Sbjct:  416 MADCYSDVQRRQLVESCRPRGDRCSEGWGQCGGLHWEGPECCWPGAECVERNEHFHQCVPEGAIH 480          
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Match: A0A1D2VQW1_9ASCO (Cellulase n=1 Tax=Ascoidea rubescens DSM 1968 TaxID=1344418 RepID=A0A1D2VQW1_9ASCO)

HSP 1 Score: 57.0 bits (136), Expect = 4.920e-8
Identity = 20/39 (51.28%), Postives = 27/39 (69.23%), Query Frame = 0
Query:   13 DRCSEGWGQCGGLHWEGPECCWPGAECIERNEWYHQCVP 51
            ++C+  +GQCGGL+W GP CC  G  C  +N +YHQC P
Sbjct:   27 EQCASLYGQCGGLNWNGPNCCTGGYLCSSQNPYYHQCTP 65          
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Match: C1MIU1_MICPC (Carbohydrate-binding module family 1 protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MIU1_MICPC)

HSP 1 Score: 54.7 bits (130), Expect = 3.240e-7
Identity = 22/41 (53.66%), Postives = 29/41 (70.73%), Query Frame = 0
Query:   15 CSEGWGQCGGLHWEGPECCW-PGAECIERNEWYHQCVPEGA 54
            C+E +GQCGG    G  CC   G +C+E++EWY QC+PEGA
Sbjct:  758 CAETYGQCGGREHAGATCCANDGDDCVEQDEWYSQCLPEGA 798          
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Match: D8LD67_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD67_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.130e-6
Identity = 23/48 (47.92%), Postives = 27/48 (56.25%), Query Frame = 0
Query:    1 MAECYSECRPKEDRCSEGWGQCGGLHWEGPECCWPGAECIERNEWYHQ 48
            MA+CYSECRP+ DRCSEGWG                   +ERNE +HQ
Sbjct:  460 MADCYSECRPRGDRCSEGWGXXXXXXXXXXXXXXXXXXXVERNEQFHQ 507          
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Match: A0A1Y3NMR3_PIRSE (Carbohydrate-binding module family 1 protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NMR3_PIRSE)

HSP 1 Score: 52.8 bits (125), Expect = 1.510e-6
Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0
Query:   15 CSEGWGQCGGLHWEGPECCWPGAECIERNEWYHQCV 50
            C++ WGQCGG+ + GP CC PG  C   NE+Y QC+
Sbjct:  317 CADKWGQCGGIGFNGPNCCKPGLTCNIVNEYYSQCL 352          
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Match: D8LMF4_ECTSI (EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF4_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 5.400e-6
Identity = 25/56 (44.64%), Postives = 26/56 (46.43%), Query Frame = 0
Query:    1 MAECYSECRPKEDRCSEGWGQCGGLHWEGPECCWPGAECIERNEWYHQCVPEGAVN 56
            MAECYSECRPK+DRCSEGWG                              PEGAVN
Sbjct:  485 MAECYSECRPKDDRCSEGWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGAVN 540          
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Match: A0A1Y1XJ05_9FUNG (Purple acid phosphatase n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XJ05_9FUNG)

HSP 1 Score: 49.3 bits (116), Expect = 2.610e-5
Identity = 20/44 (45.45%), Postives = 27/44 (61.36%), Query Frame = 0
Query:   10 PKEDRCSEGWGQCGGLHWEGPECCWPGAECIERNEWYHQCVPEG 53
            P+   CS+ WGQCGG+ + GP CC     C   +++Y QCVP G
Sbjct:  764 PEPTICSDLWGQCGGVGFNGPTCCNGDNYCKTYSDYYSQCVPIG 807          
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Match: A0A1Y3NZ82_PIRSE (Carbohydrate-binding module family 1 protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NZ82_PIRSE)

HSP 1 Score: 46.6 bits (109), Expect = 5.160e-5
Identity = 18/37 (48.65%), Postives = 22/37 (59.46%), Query Frame = 0
Query:   15 CSEGWGQCGGLHWEGPECCWPGAECIERNEWYHQCVP 51
            CS    QCGG+ ++G  CC  G  C   NEWY +CVP
Sbjct:   21 CSGASAQCGGVDYQGENCCIGGYSCEYVNEWYSECVP 57          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18324.5689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KD35_9PHAE5.710e-3072.31CBM1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A1D2VQW1_9ASCO4.920e-851.28Cellulase n=1 Tax=Ascoidea rubescens DSM 1968 TaxI... [more]
C1MIU1_MICPC3.240e-753.66Carbohydrate-binding module family 1 protein n=1 T... [more]
D8LD67_ECTSI1.130e-647.92EsV-1-166 n=2 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A1Y3NMR3_PIRSE1.510e-652.78Carbohydrate-binding module family 1 protein n=1 T... [more]
D8LMF4_ECTSI5.400e-644.64EsV-1-166 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM... [more]
A0A1Y1XJ05_9FUNG2.610e-545.45Purple acid phosphatase n=1 Tax=Anaeromyces robust... [more]
A0A1Y3NZ82_PIRSE5.160e-548.65Carbohydrate-binding module family 1 protein n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000254Cellulose-binding domain, fungalSMARTSM00236fcbd_2coord: 17..50
e-value: 4.9E-9
score: 46.0
IPR000254Cellulose-binding domain, fungalPFAMPF00734CBM_1coord: 19..46
e-value: 1.3E-10
score: 41.1
IPR000254Cellulose-binding domain, fungalPROSITEPS00562CBM1_1coord: 22..49
IPR000254Cellulose-binding domain, fungalPROSITEPS51164CBM1_2coord: 14..50
score: 11.259
NoneNo IPR availablePRODOMPD001821coord: 23..50
e-value: 0.004
score: 89.0
IPR035971Cellulose-binding domain superfamilySUPERFAMILY57180Cellulose-binding domaincoord: 18..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18324contigEcto-sp13_S_contig18324:2478..2836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18324.5689.1mRNA_Ecto-sp13_S_contig18324.5689.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18324 2339..2853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18324.5689.1 ID=prot_Ecto-sp13_S_contig18324.5689.1|Name=mRNA_Ecto-sp13_S_contig18324.5689.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
MAECYSECRPKEDRCSEGWGQCGGLHWEGPECCWPGAECIERNEWYHQCV
PEGAVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000254Cellulose-bd_dom_fun
IPR035971CBD_sf