prot_Ecto-sp13_S_contig1830.5678.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1830.5678.1
Unique Nameprot_Ecto-sp13_S_contig1830.5678.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length256
Homology
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: D7FSP3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP3_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 6.170e-108
Identity = 191/255 (74.90%), Postives = 195/255 (76.47%), Query Frame = 0
Query:    1 ADCYQEWISDGMCDPSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCTYHHYYDDDGDLYDSPTYXXXXXXFGDYSFDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSDSLDVEGGGIPSDDGKGSAPVGAIVGGVVGGTAFLAAAAVLVCLFVTGRLKCSKCCSSSDPSAAPAPPAGHGSVRATTKMFPEPAAPXXXXXXXXXXXXXXAYGSSDHGATSTATSAPPDTHPVHQFPQMK 255
            +DCYQEWISDGMCD SNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCTYHHYYDDDGDLYDSPTY      FGD S                  XXXXXXXXXXXXXXXXXXXSTS +LD+EGGGIPSDDG   APV          TAFLAAAAVLVCLFVT RLKCSKCCSS  P AAPAPPAGHGSV+ATTK FP PAAP              AYGSSDHGATSTATSAPPDTHPVHQFPQMK
Sbjct:   28 SDCYQEWISDGMCDSSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCTYHHYYDDDGDLYDSPTYDYDVDDFGDDSX-----------------XXXXXXXXXXXXXXXXXXXSTSGALDLEGGGIPSDDGDDGAPVXXXXXXXXXXTAFLAAAAVLVCLFVTCRLKCSKCCSSPGPPAAPAPPAGHGSVQATTKTFPGPAAPAAAAPASDLPPPP-AYGSSDHGATSTATSAPPDTHPVHQFPQMK 264          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: A0A6H5KN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN00_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 3.690e-56
Identity = 133/239 (55.65%), Postives = 142/239 (59.41%), Query Frame = 0
Query:    1 ADCYQEWISDGMCDPSNNNSGCEYDGGDCCSCDCFDDTYECGT-DGFTCLDPSSSCTYHHYYDDDG----------------------------DLYDSPTYXXXXXXFGDYSFDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSDSLDVEGGGIPSDDGKGSAPVGAIVGGVVGGTAFLAAAAVLVCLFVTGRLKCSKCCSSSDPSAAPAPPAGHGSVRATTKMFPEPAA 210
            +DC   WISDGMCD SNNNS C+YDGGDCCSCDCFDDTYECG+   FTC+DPSSSCTYHHY DDDG                            D YDSPTY      +  +  DD                    XXXXXXXXXXXXXX      + +     SDDG   APVGAIVGG VGGTAFLAAAAVL  LF TGRLKCSKC SSSDP AAP P AG GS RA TK +P P A
Sbjct:  127 SDCSDSWISDGMCDSSNNNSNCDYDGGDCCSCDCFDDTYECGSVTAFTCIDPSSSCTYHHYXDDDGEEWAAFTPSPFYTVTLSPTAYPQYHFDDDSYDSPTY------YDGFLDDDDTDFTPSPAVYVHSSDTDHDXXXXXXXXXXXXXXXXXXEDEADNDKATSDDGDDEAPVGAIVGGAVGGTAFLAAAAVLGYLFFTGRLKCSKCSSSSDPPAAPTP-AGDGSTRAATKAYPAPVA 358          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: A0A6H5K5D1_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D1_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.700e-21
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    3 CYQEWISDGMCDPSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSC 55
            C+  +ISDG CD SNN SGC+YDGGDCCSCDC DDTY+CG  GFTC+DP+SSC
Sbjct:   30 CFTSYISDGFCDSSNNISGCDYDGGDCCSCDCLDDTYQCGVVGFTCIDPTSSC 82          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 4.180e-14
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 0
Query:    2 DCYQEWISDGMCDPSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSC 55
            DC  ++  DG CD  NNN+ CEYDGGDCCSC C +DTY+CG  GF C+DPS+ C
Sbjct:   31 DCSPDFYRDGECDTHNNNAECEYDGGDCCSCTCQNDTYDCGVSGFDCVDPSAEC 84          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.720e-12
Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 0
Query:    1 ADCYQEWISDGMCDPSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCTY 57
            +DC   +++DG CD  NNN+ C +DGGDCC C C D  YECG  GF+CLDPS++  Y
Sbjct: 1970 SDCIGVYVTDGWCDLENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDPSATDLY 2026          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 4.910e-12
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    3 CYQEWISDGMCDPSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCT 56
            C   +  DG CD   N++ CE+DGGDCC CDC D TY+CG  G+ CLDP+SSC+
Sbjct:  410 CISSYTGDGWCDSFYNHADCEWDGGDCCECDCVDATYDCGVVGYDCLDPTSSCS 463          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.610e-11
Identity = 30/51 (58.82%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    3 CYQEWISDGMCDPSNNNSGCEYDGGDCCSCDCFDD-TYECGTDGFTCLDPS 52
            C + W++DG CD SNN   C+YDGGDCC C C D   YECG++GF+CLDP+
Sbjct:  151 CEESWMNDGYCDSSNNYPSCDYDGGDCCECSCVDGHDYECGSNGFSCLDPA 201          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 3.490e-11
Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    6 EW-ISDGMCDPSNNNSGCEYDGGDCCSCDCFD--DTYECGTDGFTCLDPSSSC 55
            +W +SDG CD  NNN+ C+YDGGDCC CDC+D  + YECG  G+ CLD +S C
Sbjct:  366 DWAVSDGKCDSGNNNAACDYDGGDCCECDCYDYGEVYECGVVGYYCLDQTSLC 418          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 4.700e-11
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    8 ISDGMCDPSNNNSGCEYDGGDCCSCDCFD--DTYECGTDGFTCLDPSSSC 55
            +SDG CD  NNN+ C+YDGGDCC CDC+D  + YECG  G+ CLD +S C
Sbjct:  364 VSDGKCDSGNNNAACDYDGGDCCECDCYDYGEAYECGAFGYYCLDQTSIC 413          
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Match: D7FSN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN8_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 3.990e-9
Identity = 64/213 (30.05%), Postives = 75/213 (35.21%), Query Frame = 0
Query:    7 WISDGMCDPSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLDPSSSCTYHHYYDDDGDLYDSPTYXXXXXXFGDYSFDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSDSLDVEGGGIPSDDGKGSAPVGAIVGGVVGGTAFLAAAAVLVCLFVTGRLK-CSKCCSSSDPSAAPAPPA-----------GHGSVRATTKMFPE 207
            +ISDG CD   N   C++DGGDCC CDC D  Y CG   + CL+PS+           GD                                                          D  DV              PVGAIVGGV+GG  FLAA  +L  LF  G LK C+  C  S     P PPA           G GS  +  K +PE
Sbjct:   65 YISDGWCDSYYNTEECDWDGGDCCECDCVDALYTCGVADYDCLNPSAC---------GGD--------------------------------------------------------EDDXXDV--------------PVGAIVGGVIGGVLFLAAVIILAVLFKKGCLKPCA--CGDSCACCEPGPPATXXXXXXXXXAGGGSAPSVVKGYPE 196          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1830.5678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FSP3_ECTSI6.170e-10874.90LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KN00_9PHAE3.690e-5655.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5D1_9PHAE2.700e-2173.58LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JTT4_9PHAE4.180e-1461.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHG7_ECTSI2.720e-1254.39LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JVP4_9PHAE4.910e-1255.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5Y7_ECTSI1.610e-1158.82Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7FX77_ECTSI3.490e-1158.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J6K0_9PHAE4.700e-1160.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSN8_ECTSI3.990e-930.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 145..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..144
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1830contigEcto-sp13_S_contig1830:279..4402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1830.5678.1mRNA_Ecto-sp13_S_contig1830.5678.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1830 279..4402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1830.5678.1 ID=prot_Ecto-sp13_S_contig1830.5678.1|Name=mRNA_Ecto-sp13_S_contig1830.5678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=256bp
ADCYQEWISDGMCDPSNNNSGCEYDGGDCCSCDCFDDTYECGTDGFTCLD
PSSSCTYHHYYDDDGDLYDSPTYDYYVDDFGDYSFDDTTDDYSVDDFGDD
SYDYPTYDYSVDDSEDDFYDSSTSDSLDVEGGGIPSDDGKGSAPVGAIVG
GVVGGTAFLAAAAVLVCLFVTGRLKCSKCCSSSDPSAAPAPPAGHGSVRA
TTKMFPEPAAPAAAASASNLPPPPPAYGSSDHGATSTATSAPPDTHPVHQ
FPQMK*
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