prot_Ecto-sp13_S_contig18253.5657.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18253.5657.1
Unique Nameprot_Ecto-sp13_S_contig18253.5657.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length252
Homology
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: A0A6H5KIA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA0_9PHAE)

HSP 1 Score: 459 bits (1181), Expect = 8.330e-153
Identity = 237/252 (94.05%), Postives = 244/252 (96.83%), Query Frame = 0
Query:    1 KTCGRDYWAGSRRGRYQSMWFKHGTIASYAALFLLAALVDYRAHLVCEYCRILLYLAVHRRTVLVVMQLRHILGAVAEIWVLILFNIGLFAWVGVILFSGTQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVSSANVGAFLLELHSMRGVASRELSRLQGLIDEVGARTPEEAPSLTLQDFQ 252
            KTCGRDYW GSR GRYQSMW KHGTIASYAALFLLA LVDYRAHLVCE+CRILLYLA+HRRTVLVV+QLRHILGAVAEIWVLILFNIGLFAWVGVILFSGT+EGG+ FSDLCEASWRLF+LFTTTNFP IMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVSSAN+GAFLLELHSMRGVASRELSRLQ LIDE GARTPEEAPSLTLQDFQ
Sbjct:  231 KTCGRDYWVGSRSGRYQSMWCKHGTIASYAALFLLAVLVDYRAHLVCEFCRILLYLAMHRRTVLVVIQLRHILGAVAEIWVLILFNIGLFAWVGVILFSGTEEGGEQFSDLCEASWRLFILFTTTNFPTIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVSSANMGAFLLELHSMRGVASRELSRLQELIDEAGARTPEEAPSLTLQDFQ 482          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: D7FNV4_ECTSI (Calcium channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNV4_ECTSI)

HSP 1 Score: 339 bits (869), Expect = 3.390e-112
Identity = 176/183 (96.17%), Postives = 180/183 (98.36%), Query Frame = 0
Query:   70 RHILGAVAEIWVLILFNIGLFAWVGVILFSGTQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVSSANVGAFLLELHSMRGVASRELSRLQGLIDEVGARTPEEAPSLTLQDFQ 252
            RHILGAVAEIWVLILFNIGLFAWVGVILFSGT+EGG+ FSDLCEASWRLFVLFTTTNFP IMMTALDQVRATI+FFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQV SAN+GAFLLELHSMRGVASRELSRLQGLIDEVGARTPEEAPSLTLQDFQ
Sbjct:   13 RHILGAVAEIWVLILFNIGLFAWVGVILFSGTEEGGKQFSDLCEASWRLFVLFTTTNFPTIMMTALDQVRATIIFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVLSANMGAFLLELHSMRGVASRELSRLQGLIDEVGARTPEEAPSLTLQDFQ 195          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: W4GNX5_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNX5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.540e-15
Identity = 54/139 (38.85%), Postives = 75/139 (53.96%), Query Frame = 0
Query:   60 RRTVLVVMQLRHILGAVAEIWVLILFNIGLFAWVGVILFSGTQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQ 198
            R+ +LV+ ++  IL  V   +V ILF    +AW+ ++LFSGT EG     ++ EASW   +L TT+NFP IMM A +  R T +FF  F+   +FFL  + LA IFN F         +   IR      AF LL  +Q
Sbjct:   72 RKILLVLSEIYSILSLV---FVFILF----YAWMSIVLFSGTPEGDAQMPNMIEASWHFLILLTTSNFPDIMMPAYNANRVTCLFFMLFICFGLFFLMNIVLAVIFNNFARYTEAEASLRHAIRKEKLTQAFQLLATKQ 203          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: A0A485K9M2_9STRA (Aste57867_3428 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K9M2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.870e-15
Identity = 58/154 (37.66%), Postives = 80/154 (51.95%), Query Frame = 0
Query:   48 EYCRILLYLAVH---RRTVLVVMQLRHILGAVAEIWV---LILFNIGLFAWVGVILFSGTQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLD 195
            EY RI L +  H   RR+      LR IL  ++EI+    L+   I  +AW+ ++LFSGT EG     ++ EASW   +L T +NFP IMM A ++ R   +FF  FV   +FFL  + LA I N F         +   IR++    AF LLD
Sbjct:  186 EYIRIALVVTTHTELRRS------LRKILAVLSEIYSILSLVFVFILFYAWMSIVLFSGTPEGKSQMPNMIEASWNFMILLTASNFPDIMMLAYNENRTVCLFFILFVCFGLFFLMNVVLAVIVNNFSRYTEAETTLRHGIRVQKLTQAFNLLD 333          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: A0A024TGM3_9STRA (EF-hand domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGM3_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.220e-14
Identity = 61/160 (38.12%), Postives = 85/160 (53.12%), Query Frame = 0
Query:   43 AHL-VCEYCRILLYLAVH-------RRTVLVVMQLRHILGAVAEIWVLILFNIGLFAWVGVILFSGTQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLL 194
            AHL + +Y RI L +  H       R+ +LV+ ++  IL  V   +V ILF    +AW+ ++LFSGT EG     ++  A W  +VL TT+NFP IMM A +  RAT +FF  F+   +FFL  + LA IFN F        ++   IR      AF LL
Sbjct:  172 AHLHIHDYVRIALLVTTHTSLRRSLRKILLVLSEIYSILSLV---FVFILF----YAWMSIVLFSGTPEGDAQMPNMTTACWHFYVLLTTSNFPDIMMPAYNANRATCLFFMLFICFGLFFLMNVVLAVIFNNFARYTEAETKLRHGIRETKLTQAFHLL 324          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: T0PXW7_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PXW7_SAPDV)

HSP 1 Score: 76.3 bits (186), Expect = 3.660e-12
Identity = 42/123 (34.15%), Postives = 62/123 (50.41%), Query Frame = 0
Query:   72 ILGAVAEIWVLILFNIGLFAWVGVILFSGTQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLL 194
            +L  V    VLI   +   +WV  +LF  T EG     ++ EASW LFVL TT NFP + M A    R++++FF FF+   +FFL  + LA  +  F    +   +    +++     AF LL
Sbjct:  177 VLNEVQHALVLIFVYVAFCSWVATVLFHHTTEGTLYLGNIYEASWNLFVLLTTANFPDVFMPAYSTQRSSVLFFVFFLCFGLFFLLNVVLAVTYTAFTRQLAAFKRKRRRVQVSKLQVAFQLL 299          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: A0A3L6VFT9_9STRA (EF-hand domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VFT9_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.130e-11
Identity = 54/158 (34.18%), Postives = 75/158 (47.47%), Query Frame = 0
Query:   60 RRTVLVVMQLRHILGAVAEIWVLILFNIGLFAWVGVILFSGTQEG-------------------GQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQ 198
            R+ +LV+ ++  IL  V   +V ILF    +AW+ ++LFSGT EG                        ++ EASW   +L TT+NFP IMM A +  R T +FF  F+   +FFL  + LA IFN F         +   IR      AF LL  +Q
Sbjct:  188 RKILLVLSEIYSILSLV---FVFILF----YAWMSIVLFSGTPEGLFPTSPYTYRTLSHASCVGDAQMPNMIEASWHFLILLTTSNFPDIMMPAYNANRVTCLFFMLFICFGLFFLMNIVLAVIFNNFARYTEAEASLRHAIRKEKLTQAFQLLATKQ 338          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: A0A448Z815_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z815_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 9.860e-11
Identity = 36/126 (28.57%), Postives = 68/126 (53.97%), Query Frame = 0
Query:   90 FAWVGVILFSGTQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVSSANVGAFLLELH 215
            +AW GV++F GT++G   F +L EA W L++  TT N+P +MM + ++ R   ++F  F+ ++ F+L  L LA   N++    +   +  +++       A+ +LD   +  VS   + A +  L+
Sbjct:  290 YAWFGVVIFHGTEQGASGFQNLIEAIWTLWICITTANYPDVMMPSYNENRVAALYFVSFMTISFFYLMNLVLAVTVNLYDDSIAERKRNRKDLSRNLLEKAYAMLDPENNDAVSRETIMAVMFILN 415          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: A0A813E2G1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813E2G1_POLGL)

HSP 1 Score: 71.2 bits (173), Expect = 2.100e-10
Identity = 45/154 (29.22%), Postives = 80/154 (51.95%), Query Frame = 0
Query:   47 CEYCRILLYLAVHRRTVLVVMQL----RHILGAVAEIWVLILFNIGLFAWVGVILFSGTQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDD 196
            C  CR L++L   +     V +L    R+    +A + + ++F    F W+G+I F+ T EGG  F    +A   L++LFTT N+P +M+ A +Q R + VFF  +++++ + L  + LA +++ ++       Q   + R  S   AF LL +
Sbjct:  273 CRLCRPLIFLCFTKSVRSTVDRLLLASRYFWSIIAALALCVMF----FVWIGIIAFTNTDEGGSQFESWFDAIASLWILFTTANYPDVMIPAYNQSRGSFVFFFVYLVISHYLLNNILLAAVYDAYKDQMKATMQKVYQNRRTSVDKAFALLSE 422          
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Match: A0A1V9YH00_9STRA (Two-pore ion channel n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH00_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.480e-10
Identity = 49/148 (33.11%), Postives = 70/148 (47.30%), Query Frame = 0
Query:   72 ILGAVAEIWVLILFNIGLFAWVGVILFSGTQEG-------------GQVFSD-LCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVILNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSGQVSSA 205
            +L  V  +  L++  +  FAWV  ILF  + EG             G ++   + +A W LFVL TT NFP + M A  + RA+I+FFA FV+  +FFL  + LA I+  F        +     RL     AF LL      QV+ +
Sbjct:  190 VLREVHHVLTLLIVYVAFFAWVATILFRQSTEGCVEYLLRHSHRIVGSLYMPTIYDAGWNLFVLLTTANFPDVFMPAYTERRASILFFAVFVVFGLFFLLNVLLAVIYQTFSSHVVAYKRARAATRLLKLQRAFELLVIVPKAQVAQS 337          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18253.5657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5KIA0_9PHAE8.330e-15394.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNV4_ECTSI3.390e-11296.17Calcium channel n=1 Tax=Ectocarpus siliculosus Tax... [more]
W4GNX5_9STRA4.540e-1538.85EF-hand domain-containing protein n=1 Tax=Aphanomy... [more]
A0A485K9M2_9STRA4.870e-1537.66Aste57867_3428 protein n=1 Tax=Aphanomyces stellat... [more]
A0A024TGM3_9STRA2.220e-1438.13EF-hand domain-containing protein n=2 Tax=Aphanomy... [more]
T0PXW7_SAPDV3.660e-1234.15Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A3L6VFT9_9STRA4.130e-1134.18EF-hand domain-containing protein n=7 Tax=Aphanomy... [more]
A0A448Z815_9STRA9.860e-1128.57Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A813E2G1_POLGL2.100e-1029.22Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A1V9YH00_9STRA2.480e-1033.11Two-pore ion channel n=1 Tax=Achlya hypogyna TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 37..168
e-value: 2.2E-8
score: 33.6
NoneNo IPR availablePANTHERPTHR46726FAMILY NOT NAMEDcoord: 47..201
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 169..252
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..140
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 12..168
NoneNo IPR availableTMHMMTMhelixcoord: 20..39
NoneNo IPR availableTMHMMTMhelixcoord: 145..167
NoneNo IPR availableTMHMMTMhelixcoord: 118..135
NoneNo IPR availableTMHMMTMhelixcoord: 76..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18253contigEcto-sp13_S_contig18253:98..2856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18253.5657.1mRNA_Ecto-sp13_S_contig18253.5657.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18253 98..2856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18253.5657.1 ID=prot_Ecto-sp13_S_contig18253.5657.1|Name=mRNA_Ecto-sp13_S_contig18253.5657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=252bp
KTCGRDYWAGSRRGRYQSMWFKHGTIASYAALFLLAALVDYRAHLVCEYC
RILLYLAVHRRTVLVVMQLRHILGAVAEIWVLILFNIGLFAWVGVILFSG
TQEGGQVFSDLCEASWRLFVLFTTTNFPIIMMTALDQVRATIVFFAFFVI
LNVFFLAPLSLAFIFNVFRGGQSGIPQMEEEIRLRSTAAAFTLLDDRQSG
QVSSANVGAFLLELHSMRGVASRELSRLQGLIDEVGARTPEEAPSLTLQD
FQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005821Ion_trans_dom