prot_Ecto-sp13_S_contig18244.5652.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig18244.5652.1
Unique Nameprot_Ecto-sp13_S_contig18244.5652.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp13_S_contig18244.5652.1 vs. uniprot
Match: D8LTQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ0_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 3.730e-69
Identity = 113/132 (85.61%), Postives = 123/132 (93.18%), Query Frame = 0
Query:    1 MRIDPRYQGSAPGHEAATVRDDSYLDTEQEHHHDESTVSHDESSAIIMLGSFVAGALVGAIICVRVFMFAPIVVVLLCGAGAAVFTKSYSKAGQISRGVGKWTSDVFLALFKVVREFNYEYQLTDKVKITAR 132
            MR  PR+Q SAPGHEAA VR+DSYLDTEQEHHHDEST++HDESSAII+LGSFVAGALVGAI+CVRVFMFAP VVVLLCGAGAAVFTKS SKAGQISR VGKWT DVFLALF+VVREFNY+YQLT KV+ITA+
Sbjct:    1 MRSYPRHQVSAPGHEAAAVRNDSYLDTEQEHHHDESTLAHDESSAIIVLGSFVAGALVGAILCVRVFMFAPTVVVLLCGAGAAVFTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQ 132          
BLAST of mRNA_Ecto-sp13_S_contig18244.5652.1 vs. uniprot
Match: A0A6H5JUV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV7_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 1.830e-68
Identity = 112/142 (78.87%), Postives = 123/142 (86.62%), Query Frame = 0
Query:    1 MRIDPRYQGSAPGHEAATVRDDSYLDTEQEHHHDESTVSHDESSAIIMLGSFVAGALVGAIICVRVFMFAPIVVVLLCGAGAAVFTKSYSK----------AGQISRGVGKWTSDVFLALFKVVREFNYEYQLTDKVKITAR 132
            M  DPR++GSAPGHEA  VR+D YLDTEQEHHHDEST++HDESSAIIMLGSFVAGAL+GAIIC RVFMFAP+VVVLLCGAGAAVFT S S+          AGQISRGVGKWTSDVFLALF+VVREFNY+YQL DKVKITA+
Sbjct:    1 MHSDPRHRGSAPGHEAVAVRNDPYLDTEQEHHHDESTLAHDESSAIIMLGSFVAGALMGAIICARVFMFAPMVVVLLCGAGAAVFTNSDSEVGKFVVRLRWAGQISRGVGKWTSDVFLALFRVVREFNYKYQLADKVKITAQ 142          
BLAST of mRNA_Ecto-sp13_S_contig18244.5652.1 vs. uniprot
Match: D8LTP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP9_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 5.150e-44
Identity = 93/153 (60.78%), Postives = 104/153 (67.97%), Query Frame = 0
Query:    1 MRIDPRYQGSAPGHEAATVRDDSYLD---------TEQEHHHDESTVSHDESSAIIMLGSFVAGALVGAIICVRVFMFAPIVVVLLCGA------------GAAVFTKSYSKAGQISRGVGKWTSDVFLALFKVVREFNYEYQLTDKVKITAR 132
            M+ DPR+QGSAPG EAA  RDDS+           TEQ+HH D S + HDESSAI MLGSFVAGA VG +ICVR+FMFAPIV +LLCGA             AAV TKS SKAG ISR  G + SDV LALF+ VREFN  YQLTDKVK T +
Sbjct:    1 MQSDPRHQGSAPGSEAAANRDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQ 153          
BLAST of mRNA_Ecto-sp13_S_contig18244.5652.1 vs. uniprot
Match: A0A6H5JZU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU5_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.400e-26
Identity = 66/117 (56.41%), Postives = 78/117 (66.67%), Query Frame = 0
Query:    1 MRIDPRYQGSAPGHEAATVRDDSYLD---------TEQEHHHDESTVSHDESSAIIMLGSFVAGALVGAIICVRVFMFAPIVVVLLCGA------------GAAVFTKSYSKAGQIS 96
            M+ +PR+QGSAPG EAA  RDDS            TEQ+H+ D S ++HDESSAI MLGSFVAGA VGA+ICVR+F+ APIV +LLCGA            GAAV TKS+SK   IS
Sbjct:    1 MQSNPRHQGSAPGSEAAANRDDSCRHAKSFEVDNGTEQQHNRDRSILAHDESSAITMLGSFVAGASVGAMICVRLFVLAPIVFLLLCGACVAVTVVLXXXAGAAVVTKSHSKVESIS 117          
BLAST of mRNA_Ecto-sp13_S_contig18244.5652.1 vs. uniprot
Match: D8LTP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 6.200e-25
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 0
Query:   26 DTEQEHHHDESTVSHDESSAIIMLGSFVAGALVGAIICVRVFMFAPIVVVLLCGAGAAVFTKSYSKAGQISRGVGKWTSDVFLALFKVVREFNYEYQLTDKVKITAR 132
            D EQ H   +  ++HDE+S II+ GSF+AGALVG +IC      AP  VVLL GAGAA  TKS SK G+ SR VGK +SD+ LA+F++ RE+N++++LTDK K+ A+
Sbjct:   36 DNEQPH---QEVIAHDEASGIIVFGSFIAGALVGVVIC------APAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAK 133          
BLAST of mRNA_Ecto-sp13_S_contig18244.5652.1 vs. uniprot
Match: A0A6H5JV13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV13_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 3.820e-6
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0
Query:   88 SYSKAGQISRGVGKWTSDVFLALFKVVREFNYEYQLTDKVKITAR 132
            ++ K G ISR  G +TSDV LAL +VVRE N   QL+DKVK+T +
Sbjct:   17 TFMKVGTISRRAGNFTSDVLLALLRVVREINRTCQLSDKVKVTVQ 61          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig18244.5652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LTQ0_ECTSI3.730e-6985.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUV7_9PHAE1.830e-6878.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP9_ECTSI5.150e-4460.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZU5_9PHAE1.400e-2656.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTP8_ECTSI6.200e-2553.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JV13_9PHAE3.820e-655.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 63..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..62
NoneNo IPR availableTMHMMTMhelixcoord: 66..85
NoneNo IPR availableTMHMMTMhelixcoord: 43..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig18244contigEcto-sp13_S_contig18244:773..2411 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig18244.5652.1mRNA_Ecto-sp13_S_contig18244.5652.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig18244 773..3211 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig18244.5652.1 ID=prot_Ecto-sp13_S_contig18244.5652.1|Name=mRNA_Ecto-sp13_S_contig18244.5652.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MRIDPRYQGSAPGHEAATVRDDSYLDTEQEHHHDESTVSHDESSAIIMLG
SFVAGALVGAIICVRVFMFAPIVVVLLCGAGAAVFTKSYSKAGQISRGVG
KWTSDVFLALFKVVREFNYEYQLTDKVKITARSDGEGESRGAEARHL*
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