prot_Ecto-sp13_S_contig1815.5604.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1815.5604.1
Unique Nameprot_Ecto-sp13_S_contig1815.5604.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length229
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1815.5604.1 vs. uniprot
Match: D7G2Z6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2Z6_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 4.800e-129
Identity = 196/217 (90.32%), Postives = 201/217 (92.63%), Query Frame = 0 
Query:   13 MVVMLVPLADAFALGSSAGWHTHAVARPATRSTRPATTIMMAKKNRRERRYAEAKNKKSSGSKQ-PSAATSSAKWLQVLDNTSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGNAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGEIAGEQPKGLAQVLVSKVVSQTPAESMTTHQAQVLSTGAVVVRVD 228
            MVV+LVPL DAFALGSSAGWHTHAVARPATRSTR  TT+M          YAEAKNKKSSGSKQ PS ATS+AKWLQVLD+TSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGG AEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGEIAGEQPKGLAQVLVSKVVSQTPAES+TTHQAQVLSTGAVVVRVD
Sbjct:    1 MVVVLVPLVDAFALGSSAGWHTHAVARPATRSTRSLTTMMXXXXXXXXXXYAEAKNKKSSGSKQQPSGATSNAKWLQVLDSTSELEPGSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGKAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGEIAGEQPKGLAQVLVSKVVSQTPAESITTHQAQVLSTGAVVVRVD 217
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BLAST of mRNA_Ecto-sp13_S_contig1815.5604.1 vs. uniprot
Match: W7TAQ7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAQ7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 9.050e-11
Identity = 49/144 (34.03%), Postives = 71/144 (49.31%), Query Frame = 0 
Query:   86 WLQVLDNTSELEP--GSVKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGNAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGEIAGEQPKGLAQVLVSKVVSQTPAESMTTHQAQVLSTGAVVVRV 227
            + +VLD  SEL    GS K V G  K +  +  +    G   A+   CGRCKFPL+ GKV        +ED  P VE D +  I I CPLC   F+L +G + G Q   + Q + +   S+  A  + T+ A   + G+V  ++
Sbjct:  104 FTKVLDVGSELADAEGSQKAV-GPLKDDKFLLLIRRKEGRVSAIDANCGRCKFPLLKGKV--------SED--PSVEDDEDKGI-ITCPLCAVRFSLASGLVTGAQADNVLQRVSASFFSKQIASGLKTYAAAAGTDGSVYAKL 235
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BLAST of mRNA_Ecto-sp13_S_contig1815.5604.1 vs. uniprot
Match: A0A7S2USE0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE0_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.370e-8
Identity = 39/147 (26.53%), Postives = 68/147 (46.26%), Query Frame = 0 
Query:   86 WLQVLDNTSELEP--GSVKVVS-GKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGGNAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGEIAGE---QPKGLAQVLVSKVVSQTPAESMTTHQAQVLSTGAVVVR 226
            W+QV ++  +++   G+ K V      G+     +  + G   +    CGRC+FPLINGK+                  D + E  I CPLCG  F+L +G    E   Q KGL Q ++   + +T  +++  ++ +  + G V ++
Sbjct:   93 WIQVFESDEDMDSKEGATKAVEITDPLGKPAPVLMIRHEGKISSTEIGCGRCQFPLINGKI-----------------MDQDGEPHIECPLCGCGFSLSSGVYKEEMDGQSKGLMQNMMGGFMGKTTPKNIKVYRTEENNVGEVYIK 222
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1815.5604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2Z6_ECTSI4.800e-12990.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TAQ7_9STRA9.050e-1134.03Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S2USE0_9STRA6.370e-826.53Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 83..226
e-value: 7.5E-9
score: 37.2
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 92..190
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 54..227
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 54..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..228
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.922
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1815contigEcto-sp13_S_contig1815:7415..13636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1815.5604.1mRNA_Ecto-sp13_S_contig1815.5604.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1815 7345..14317 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1815.5604.1 ID=prot_Ecto-sp13_S_contig1815.5604.1|Name=mRNA_Ecto-sp13_S_contig1815.5604.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=229bp
MSTSTRILAFLSMVVMLVPLADAFALGSSAGWHTHAVARPATRSTRPATT
IMMAKKNRRERRYAEAKNKKSSGSKQPSAATSSAKWLQVLDNTSELEPGS
VKVVSGKYKGEDRVFTLAAYGGTYYAVSEACGRCKFPLINGKVKLLTGGG
NAEDVKPGVEQDPEAEIAIACPLCGAMFNLRTGEIAGEQPKGLAQVLVSK
VVSQTPAESMTTHQAQVLSTGAVVVRVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf