prot_Ecto-sp13_S_contig1812.5583.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1812.5583.1
Unique Nameprot_Ecto-sp13_S_contig1812.5583.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length318
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1812.5583.1 vs. uniprot
Match: A0A6H5K639_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K639_9PHAE)

HSP 1 Score: 533 bits (1374), Expect = 2.040e-184
Identity = 303/314 (96.50%), Postives = 308/314 (98.09%), Query Frame = 0 
Query:    5 DALANRERGSQTVATMCDVLPEKKVSLWAARSRERCVGQFQTETEVDQHLGPVTPVIPERAQAEALNAEKLEKYIKTNSSALVELSKLEEEKAKQAKVAAAGGEQEDPALLARIGVVKDGIYKRMKLLASWADLDDDQKSRTLYREQPQDGRTPAAGYGAMGHAAEYSGGSSQYHHAPETQRAAQLARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLAGGPWEAPEQARVRTSKYHGVSFFKGRFTAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETGNLTLPRNRGNEVVRLGAPRYPEGWTG 318
            DALAN ERG  TVATMCDVLPEKKVSLWAARSRERCVGQFQTETEVDQHLGPVTPVIPERAQAEALNAEKLEKYI TNSSALVEL+KLEEEKAKQAKVAAAGGEQEDPALLARIGVVKDGIYKRMKLLASWADLDDDQKSRTLYREQPQDGRTPAAGYGAMGHAAEYSGG SQYHHAPETQRAAQLARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQG+AGGPWEAPEQARVRTSKYHGVSFFKGR+TAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETG+LTLPRNRGNEVV+ GAPRYPEGWTG
Sbjct:   12 DALANGERGPHTVATMCDVLPEKKVSLWAARSRERCVGQFQTETEVDQHLGPVTPVIPERAQAEALNAEKLEKYITTNSSALVELAKLEEEKAKQAKVAAAGGEQEDPALLARIGVVKDGIYKRMKLLASWADLDDDQKSRTLYREQPQDGRTPAAGYGAMGHAAEYSGGGSQYHHAPETQRAAQLARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGIAGGPWEAPEQARVRTSKYHGVSFFKGRYTAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETGSLTLPRNRGNEVVQFGAPRYPEGWTG 325
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BLAST of mRNA_Ecto-sp13_S_contig1812.5583.1 vs. uniprot
Match: D7G2A6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A6_ECTSI)

HSP 1 Score: 416 bits (1070), Expect = 1.620e-144
Identity = 246/259 (94.98%), Postives = 251/259 (96.91%), Query Frame = 0 
Query:   60 VIPERAQAEALNAEKLEKYIKTNSSALVELSKLEEEKAKQAKVAAAGGEQEDPALLARIGVVKDGIYKRMKLLASWADLDDDQKSRTLYREQPQDGRTPAAGYGAMGHAAEYSGGSSQYHHAPETQRAAQLARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLAGGPWEAPEQARVRTSKYHGVSFFKGRFTAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETGNLTLPRNRGNEVVRLGAPRYPEGWTG 318
            V+PE+   +ALNAEKLEKYIKTNS ALVEL+KLEEEKAKQAKVAAAGGEQEDPALL RIGVVKDGIYKRMKLLASWADLDDDQKSRTLYREQPQDGRTPAAGYGAMGHAAEYSGG SQ+HHAPETQRAAQLARA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLAGGPWEAPEQ RVRTSKYHGVSFFKGRFTAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETGNLTLPRNRGNEVVRLGAPRYPEGWTG
Sbjct:    4 VLPEK---KALNAEKLEKYIKTNSRALVELAKLEEEKAKQAKVAAAGGEQEDPALLTRIGVVKDGIYKRMKLLASWADLDDDQKSRTLYREQPQDGRTPAAGYGAMGHAAEYSGGGSQHHHAPETQRAAQLARAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGLAGGPWEAPEQTRVRTSKYHGVSFFKGRFTAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETGNLTLPRNRGNEVVRLGAPRYPEGWTG 259
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1812.5583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K639_9PHAE2.040e-18496.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2A6_ECTSI1.620e-14494.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 243..289

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1812contigEcto-sp13_S_contig1812:8259..14234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1812.5583.1mRNA_Ecto-sp13_S_contig1812.5583.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1812 8259..14234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1812.5583.1 ID=prot_Ecto-sp13_S_contig1812.5583.1|Name=mRNA_Ecto-sp13_S_contig1812.5583.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=318bp
GLGRDALANRERGSQTVATMCDVLPEKKVSLWAARSRERCVGQFQTETEV
DQHLGPVTPVIPERAQAEALNAEKLEKYIKTNSSALVELSKLEEEKAKQA
KVAAAGGEQEDPALLARIGVVKDGIYKRMKLLASWADLDDDQKSRTLYRE
QPQDGRTPAAGYGAMGHAAEYSGGSSQYHHAPETQRAAQLARAARTAQYH
EQVQLLQAQAARAAAAAAAAAAAAQGLAGGPWEAPEQARVRTSKYHGVSF
FKGRFTAQFTWGGKQYYLGRYDTEGEAHTVVQRATKEVMETGNLTLPRNR
GNEVVRLGAPRYPEGWTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016177DNA-bd_dom_sf