prot_Ecto-sp13_S_contig1804.5536.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1804.5536.1
Unique Nameprot_Ecto-sp13_S_contig1804.5536.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length402
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1804.5536.1 vs. uniprot
Match: D7FH43_ECTSI (Exocyst complex component, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH43_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 3.320e-47
Identity = 252/276 (91.30%), Postives = 257/276 (93.12%), Query Frame = 0 
Query:    1 MRARRDELSSNQNVSVVSNLAEIGGSYVPLLAAWCAQLLPEIADEEEVSNLRDLRSEFQRSAQNPLRAREIASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-ASDGIVKAPSGSVAPSGRXXXXXSERRSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------DASRDKIPSLKQSLNNRASFSKPSGGASSAVPVATGRISVTSTS 265
            MRARRDELSSNQ+V+VV+NLAEIGGSYVPLLAAWCAQLLPEIA+EEEVSNLRDLRSEFQRSAQNPLRAREIASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ASDGIVKAPSGS APSGRXXXXX  RRSS XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  XXXXXXXXX          DASRDKIPSLKQSL NRASFSKPSGGAS+AVPV TGRISVTSTS
Sbjct:  582 MRARRDELSSNQSVAVVNNLAEIGGSYVPLLAAWCAQLLPEIANEEEVSNLRDLRSEFQRSAQNPLRAREIASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDGIVKAPSGSAAPSGRXXXXXXXRRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATXXXXXXXXXXXRSGSLPHGDASRDKIPSLKQSLTNRASFSKPSGGASTAVPVTTGRISVTSTS 857
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BLAST of mRNA_Ecto-sp13_S_contig1804.5536.1 vs. uniprot
Match: A0A6H5K667_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K667_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 8.420e-16
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0 
Query:    1 MRARRDELSSNQNVSVVSNLAEIGGSYVPLLAAWCAQLLPEIAD 44
            MRARR+ELSSNQ+VSVVSNLAEIG SYVPLLAAWCAQLLPEIAD
Sbjct:   39 MRARRNELSSNQSVSVVSNLAEIGVSYVPLLAAWCAQLLPEIAD 82
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1804.5536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH43_ECTSI3.320e-4791.30Exocyst complex component, putative n=1 Tax=Ectoca... [more]
A0A6H5K667_9PHAE8.420e-1693.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1804contigEcto-sp13_S_contig1804:13338..15205 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1804.5536.1mRNA_Ecto-sp13_S_contig1804.5536.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1804 13338..15235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1804.5536.1 ID=prot_Ecto-sp13_S_contig1804.5536.1|Name=mRNA_Ecto-sp13_S_contig1804.5536.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=402bp
MRARRDELSSNQNVSVVSNLAEIGGSYVPLLAAWCAQLLPEIADEEEVSN
LRDLRSEFQRSAQNPLRAREIASSSGGSSSTAGRLPSAASGTLVAAAAAA
QASTTASSASAGNRSRRSSSSGGGASGTPPIGVAGAPSSSSSSQRRTSGG
GASDGIVKAPSGSVAPSGRPSGGGSERRSSGGGGSERRSSGDGSGSRASA
ATASSSSAAGGGARSGPLAAGDASRDKIPSLKQSLNNRASFSKPSGGASS
AVPVATGRISVTSTSPSVTASGGATPVSASALADAAAARAAQAAGTHRVS
ELFSHYAECTPAQLSCGVFSIHSRGERRQLRQFPVLVRVGQPQRRWGHER
CQRRGEPRGRRGGGDVGGGSPAETHPHPQGGQGGGASEGQGRRGGESRTR
RK
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