prot_Ecto-sp13_S_contig17978.5495.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17978.5495.1
Unique Nameprot_Ecto-sp13_S_contig17978.5495.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length125
Homology
BLAST of mRNA_Ecto-sp13_S_contig17978.5495.1 vs. uniprot
Match: D8LEC1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC1_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 3.940e-78
Identity = 120/124 (96.77%), Postives = 124/124 (100.00%), Query Frame = 0
Query:    1 MYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKTRIRDTTNTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTK 124
            MYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEK+R+R+TT+TLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTK
Sbjct:  126 MYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKSRVRNTTDTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRRRKARMVGADLCREYTK 249          
BLAST of mRNA_Ecto-sp13_S_contig17978.5495.1 vs. uniprot
Match: A0A835ZE72_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE72_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 7.850e-16
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0
Query:    1 MYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKTRIRDTTNTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAK------------------------VLGQRFWRKATKRRRKARMVGADLC 119
            MY+Y T  H  LVRF+F ++++GK +    DV   V+LL +   R ++TT ++M ++D     +V++E F   E++LGSML+PAF+LQK LR K                        VL +RFW +A + R  A   GAD  
Sbjct:  130 MYSYCTQSHGTLVRFSFRIISAGKRYITLGDVGAFVALLITNPARHQETTASMMQVLDSEKTGRVAWEQFLANEKKLGSMLYPAFRLQKMLRNKSSTLTASAPAADNRPRSSRAARLQVLSRRFWARAARGR--AANAGADAA 270          
BLAST of mRNA_Ecto-sp13_S_contig17978.5495.1 vs. uniprot
Match: A0A225WT84_9STRA (EF-hand domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WT84_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 5.560e-6
Identity = 43/117 (36.75%), Postives = 66/117 (56.41%), Query Frame = 0
Query:    1 MYNYGTLLHEALVRFAFDVM---ASGK------EFCNRQDVIGLVSLLHSEKTRIRDTTNTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 108
            ++NY +  H +LVRFAFD+     SG+      E C R+ V G    ++S   +I D    L  IM     +++S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:   18 VWNYCSFNHASLVRFAFDLYDIDGSGEIEHDEIERCVRE-VWGAGWEVNSNAHKIVDK---LDAIMANTTNNRLSATLFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWARATEKR 130          
BLAST of mRNA_Ecto-sp13_S_contig17978.5495.1 vs. uniprot
Match: G4ZDA4_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZDA4_PHYSP)

HSP 1 Score: 52.4 bits (124), Expect = 1.430e-5
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 0
Query:    1 MYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSEKTRIRDTTNTLMGIMD------PHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 108
            ++NY +  H +LVRFA+D+    G       +V+  V  +         +   ++  +D      P+NR  +S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:   47 VWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREIWGSAWETSSSAQKIVEKLDAIMANTPNNR--LSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 159          
BLAST of mRNA_Ecto-sp13_S_contig17978.5495.1 vs. uniprot
Match: A0A6A3MZN3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MZN3_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.060e-5
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 0
Query:    1 MYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSEKTRIRDTTNTLMGIMD------PHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 108
            ++NY +  H +LVRFA+D+    G       +V+  V  +         +   ++  +D      P+NR  +S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:  102 VWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREVWGSAWETSSSAQKIVDKLDAIMANTPNNR--LSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 214          
BLAST of mRNA_Ecto-sp13_S_contig17978.5495.1 vs. uniprot
Match: A0A6A3ZBF7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZBF7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 2.310e-5
Identity = 36/115 (31.30%), Postives = 61/115 (53.04%), Query Frame = 0
Query:    1 MYNYGTLLHEALVRFAFDVM-ASGKEFCNRQDVIGLVSLLHSEKTRIRDTTNTLMGIMD------PHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRFWRKATKRR 108
            ++NY +  H +LVRFA+D+    G       +V+  V  +         +   ++  +D      P+NR  +S   F++   R   +LFPAF+LQ  ++ KVLG+RFW +AT++R
Sbjct:  102 VWNYCSFNHASLVRFAYDLYDIDGSGEIEHDEVVRCVREVWGSAWETSSSAQKIVDKLDAIMANTPNNR--LSAALFQEFAVRHPMLLFPAFELQMEIQRKVLGKRFWSRATEKR 214          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17978.5495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LEC1_ECTSI3.940e-7896.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZE72_9STRA7.850e-1635.66EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A225WT84_9STRA5.560e-636.75EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
G4ZDA4_PHYSP1.430e-531.30Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A3MZN3_9STRA2.060e-531.30Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3ZBF7_9STRA2.310e-531.30Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17978contigEcto-sp13_S_contig17978:528..1530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17978.5495.1mRNA_Ecto-sp13_S_contig17978.5495.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17978 528..1872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17978.5495.1 ID=prot_Ecto-sp13_S_contig17978.5495.1|Name=mRNA_Ecto-sp13_S_contig17978.5495.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=125bp
MYNYGTLLHEALVRFAFDVMASGKEFCNRQDVIGLVSLLHSEKTRIRDTT
NTLMGIMDPHNRDKVSFETFRKEERRLGSMLFPAFKLQKTLRAKVLGQRF
WRKATKRRRKARMVGADLCREYTK*
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