prot_Ecto-sp13_S_contig17932.5472.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17932.5472.1
Unique Nameprot_Ecto-sp13_S_contig17932.5472.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length136
Homology
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A6H5KY11_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KY11_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.750e-84
Identity = 132/135 (97.78%), Postives = 135/135 (100.00%), Query Frame = 0
Query:    1 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLSCKGE 135
            LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTT+SGVAHAAY+NDLEALRAARELYGFLPLSCKG+
Sbjct:  146 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTVSGVAHAAYDNDLEALRAARELYGFLPLSCKGD 280          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A812Z5R2_SYMMI (PccB protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z5R2_SYMMI)

HSP 1 Score: 219 bits (557), Expect = 1.180e-69
Identity = 106/131 (80.92%), Postives = 121/131 (92.37%), Query Frame = 0
Query:    1 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLS 131
            +G PVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASG IPQ+S+IMG CAGGAVYSPAMTDFIFMV+R+SYMFVTGP VVKTVT E+VTQE LGGA++HT++SGVAH A+ ND+EALRA R+LY +LPL+
Sbjct:   55 VGAPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGVIPQISMIMGPCAGGAVYSPAMTDFIFMVQRTSYMFVTGPNVVKTVTMEDVTQEELGGAETHTSLSGVAHGAFANDVEALRALRQLYSYLPLN 185          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A482RZS8_9ARCH (CoA carboxyltransferase N-terminal domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZS8_9ARCH)

HSP 1 Score: 216 bits (549), Expect = 1.390e-69
Identity = 108/132 (81.82%), Postives = 120/132 (90.91%), Query Frame = 0
Query:    2 GCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLSCK 133
            G PVIGLNDSGGARIQEGVDSLAGYADVF RNVDASG IPQLSL+MG CAGGAVYSPAMTDFIFMV+R+S+MFVTGP VVKTVT EEVTQEVLGGA +HT++SGVAHAA+ ND+ ALR AREL+ +LPL+ K
Sbjct:    8 GAPVIGLNDSGGARIQEGVDSLAGYADVFLRNVDASGVIPQLSLVMGPCAGGAVYSPAMTDFIFMVQRTSHMFVTGPNVVKTVTGEEVTQEVLGGADTHTSVSGVAHAAFQNDVLALRGARELFEYLPLNNK 139          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A482RCA6_9ARCH (CoA carboxyltransferase N-terminal domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RCA6_9ARCH)

HSP 1 Score: 214 bits (545), Expect = 2.880e-67
Identity = 103/134 (76.87%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLSCKG 134
            +G PVIGLNDSGGARIQEGVDSLAGYA+VFQRNVDASG +PQ+S+IMG CAGGAVYSPAMTDF FMV+ +SYMFVTGP VVKTVT+E+VTQE LGGA++HT+ SGVAH +++NDL+A+ A RE Y FLPLS KG
Sbjct:  167 VGVPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVDASGYVPQISVIMGPCAGGAVYSPAMTDFTFMVRDTSYMFVTGPNVVKTVTREDVTQEELGGAKTHTSKSGVAHGSFDNDLDAIAALREFYNFLPLSAKG 300          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A7S0SX47_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SX47_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.330e-65
Identity = 102/133 (76.69%), Postives = 119/133 (89.47%), Query Frame = 0
Query:    1 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLSCK 133
            +G PVIGLNDSGGARIQEG+DSL GYADVF +NV+ASG IPQ+S+IMG CAGGAVYSPAMTDFIFMVKRSSYMFVTGP VVKTVTQE+VTQE LGGA++HT++SGVAH A++ND+ AL   REL+ +LPL+ K
Sbjct:  126 VGAPVIGLNDSGGARIQEGIDSLGGYADVFLKNVNASGIIPQISVIMGPCAGGAVYSPAMTDFIFMVKRSSYMFVTGPSVVKTVTQEDVTQEELGGAETHTSLSGVAHGAFDNDIIALEKIRELFQYLPLNNK 258          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A836CAR6_9STRA (Propionyl-CoA carboxylase beta chain mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR6_9STRA)

HSP 1 Score: 212 bits (540), Expect = 4.720e-64
Identity = 107/130 (82.31%), Postives = 116/130 (89.23%), Query Frame = 0
Query:    2 GCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLS 131
            G PVIGLNDSGGARIQEGVDSLAGYA+VFQRNVDASG IPQLSLIMG CAGGAVYSPA+TDFI MV+ SSYMFVTGP VVKTVTQE VTQE LGGA +H ++SGVAH A +NDL AL+AAREL+ FLPLS
Sbjct:  135 GAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVDASGLIPQLSLIMGPCAGGAVYSPALTDFIMMVRNSSYMFVTGPDVVKTVTQETVTQEALGGADTHCSVSGVAHVARDNDLAALKAARELFDFLPLS 264          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A7S2RD78_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD78_9STRA)

HSP 1 Score: 210 bits (534), Expect = 5.130e-63
Identity = 102/131 (77.86%), Postives = 116/131 (88.55%), Query Frame = 0
Query:    1 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLS 131
            +G PVIGLNDSGGARIQEG+DSLAGYADVFQ+NV ASG +PQ+SL+MG CAGGAVYSPAMTDFIFMV+R+SYMFVTGP VVKTVT EEVTQE LGGA +HT +SGVAH A+ ND++ALRA R L  +LPLS
Sbjct:  150 VGAPVIGLNDSGGARIQEGIDSLAGYADVFQQNVIASGVVPQISLVMGPCAGGAVYSPAMTDFIFMVRRTSYMFVTGPDVVKTVTNEEVTQEELGGADTHTALSGVAHGAFENDVDALRATRALLDYLPLS 280          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A0S7KDL7_9TELE (PCCB (Fragment) n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7KDL7_9TELE)

HSP 1 Score: 199 bits (507), Expect = 8.670e-63
Identity = 97/131 (74.05%), Postives = 114/131 (87.02%), Query Frame = 0
Query:    1 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLS 131
            +G PVIGLNDSGGARIQEGV+SLAGYAD+F RNV ASG +PQ+SLIMG CAGGAVYSPA+TDF FMVK +SY+F+TGP VVK+VT E+VTQE LGGA++HTT+SGVAH A+ ND+EAL   RE + FLPLS
Sbjct:   61 VGAPVIGLNDSGGARIQEGVESLAGYADIFLRNVLASGVVPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITGPDVVKSVTNEDVTQEELGGAKTHTTVSGVAHRAFENDVEALLNLREFFNFLPLS 191          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A192ZJC9_9EUKA (Propionyl-CoA carboxylase b-subunit n=1 Tax=Stygiella incarcerata TaxID=1712417 RepID=A0A192ZJC9_9EUKA)

HSP 1 Score: 209 bits (532), Expect = 9.940e-63
Identity = 102/135 (75.56%), Postives = 116/135 (85.93%), Query Frame = 0
Query:    1 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLSCKGE 135
            +G PVIGLNDSGGARIQEGVDSLAGYA+VFQRNV  SG +PQ+SL+MG CAGGAVYSPA+TDF  MV+ +SY+F+TGP VVKTVT EEVTQE LGGAQ+HT  SGVAH AYNND+EAL+A REL G+LP SC  E
Sbjct:  149 VGAPVIGLNDSGGARIQEGVDSLAGYAEVFQRNVLTSGVVPQISLVMGPCAGGAVYSPALTDFTIMVRGTSYLFITGPDVVKTVTGEEVTQEQLGGAQTHTVKSGVAHMAYNNDIEALQATRELVGYLPSSCHVE 283          
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Match: A0A7S3LK18_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LK18_9STRA)

HSP 1 Score: 209 bits (532), Expect = 1.060e-62
Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = 0
Query:    1 LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGACAGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSHTTMSGVAHAAYNNDLEALRAARELYGFLPLSCKGE 135
            +G PVIGLNDSGGARIQEGVDSLAGYADVFQRNV+ASG IPQLS+IMG CAGGAVYSPA+TDFI MV+ +SYMFVTGP VVKTVT EEVTQE LGGA+SHT  SGV+H A++ND+EAL+  REL+ +LPLS + E
Sbjct:  152 VGAPVIGLNDSGGARIQEGVDSLAGYADVFQRNVEASGVIPQLSVIMGPCAGGAVYSPAITDFIMMVRDTSYMFVTGPEVVKTVTNEEVTQEELGGAKSHTQKSGVSHLAFDNDVEALKMTRELFDYLPLSNREE 286          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17932.5472.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY11_9PHAE2.750e-8497.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A812Z5R2_SYMMI1.180e-6980.92PccB protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A482RZS8_9ARCH1.390e-6981.82CoA carboxyltransferase N-terminal domain-containi... [more]
A0A482RCA6_9ARCH2.880e-6776.87CoA carboxyltransferase N-terminal domain-containi... [more]
A0A7S0SX47_9STRA1.330e-6576.69Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A836CAR6_9STRA4.720e-6482.31Propionyl-CoA carboxylase beta chain mitochondrial... [more]
A0A7S2RD78_9STRA5.130e-6377.86Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A0S7KDL7_9TELE8.670e-6374.05PCCB (Fragment) n=2 Tax=Poeciliopsis prolifica Tax... [more]
A0A192ZJC9_9EUKA9.940e-6375.56Propionyl-CoA carboxylase b-subunit n=1 Tax=Stygie... [more]
A0A7S3LK18_9STRA1.060e-6277.04Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.226.10coord: 1..135
e-value: 5.8E-46
score: 158.8
NoneNo IPR availablePANTHERPTHR43842FAMILY NOT NAMEDcoord: 2..133
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
IPR034733Acetyl-CoA carboxylasePFAMPF01039Carboxyl_transcoord: 2..130
e-value: 6.6E-49
score: 166.9
IPR011762Acetyl-coenzyme A carboxyltransferase, N-terminalPROSITEPS50980COA_CT_NTERcoord: 1..135
score: 42.021
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 2..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17932contigEcto-sp13_S_contig17932:2499..3552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17932.5472.1mRNA_Ecto-sp13_S_contig17932.5472.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17932 2499..3552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17932.5472.1 ID=prot_Ecto-sp13_S_contig17932.5472.1|Name=mRNA_Ecto-sp13_S_contig17932.5472.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=136bp
LGCPVIGLNDSGGARIQEGVDSLAGYADVFQRNVDASGSIPQLSLIMGAC
AGGAVYSPAMTDFIFMVKRSSYMFVTGPGVVKTVTQEEVTQEVLGGAQSH
TTMSGVAHAAYNNDLEALRAARELYGFLPLSCKGE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034733AcCoA_carboxyl
IPR011762COA_CT_N
IPR029045ClpP/crotonase-like_dom_sf