prot_Ecto-sp13_S_contig17821.5416.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17821.5416.1
Unique Nameprot_Ecto-sp13_S_contig17821.5416.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length347
Homology
BLAST of mRNA_Ecto-sp13_S_contig17821.5416.1 vs. uniprot
Match: D7G0Y1_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y1_ECTSI)

HSP 1 Score: 608 bits (1569), Expect = 1.220e-196
Identity = 322/347 (92.80%), Postives = 329/347 (94.81%), Query Frame = 0
Query:    1 MIWDPATGHRTCVLPASLFGAVRRLSFSPDGSMLCGIGADRDNSLCVWSSASGSWTDGARVALGQGPRRPAMFVAWAAAADGKQVESSPPYQVMTGGQNYVVFWTLRPNLSSRLGNVRRSCPPADGVTAIAAESSPEAERAPASNEMVSEAAKHSVFSSAEKAMAETFTCGVAIGYEGGKAGSASAGGAGEEAAGAVVTAVTGTASGAIAVWENFECVKMVLGVHGASAVLCLSPTYSGGFVSGGADGNVCVWDNQLNVKGSIITIRQEGSPSEAVRAVTVNRKESNMACGTSSGRVIEVSLDSGDTSVLVDGPAPGLPPINNAADGAATAAALNRAAAAVAASPKD 347
            MIWDPATGHRTCVLPASLFGAVRRLSFSPDGSMLCGIGADRDNSLCVWSSASG+WTDGARVALGQGPRRPAMFV WAAAADGKQ +SSPPYQVMTGGQNYVVFWTLRP+LSSRLGNVRRSCPPADG TA AAESS EAERAPASNE VS A K SV SSAEKAM ETFTCGVAIG  GGKAGS SAGGAGEEAAGAVVTAVTGTASGAIAVWENFECVKMVLGVHGASAVLCLSPTYSGGFVSGGADGNVCVWDNQLNVKGSIITIRQEGSPSEAVRAVTVNRKESNMACGTSSGRVIEVSLDSGDTSVL+DGPAPG PP++N ADGA  AAA+NRAAAAVAASPKD
Sbjct: 2018 MIWDPATGHRTCVLPASLFGAVRRLSFSPDGSMLCGIGADRDNSLCVWSSASGTWTDGARVALGQGPRRPAMFVTWAAAADGKQEKSSPPYQVMTGGQNYVVFWTLRPSLSSRLGNVRRSCPPADGATATAAESSSEAERAPASNETVSGATKSSVISSAEKAMVETFTCGVAIGCGGGKAGSTSAGGAGEEAAGAVVTAVTGTASGAIAVWENFECVKMVLGVHGASAVLCLSPTYSGGFVSGGADGNVCVWDNQLNVKGSIITIRQEGSPSEAVRAVTVNRKESNMACGTSSGRVIEVSLDSGDTSVLIDGPAPGPPPVDNTADGATAAAAMNRAAAAVAASPKD 2364          
BLAST of mRNA_Ecto-sp13_S_contig17821.5416.1 vs. uniprot
Match: A0A6H5KFM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM8_9PHAE)

HSP 1 Score: 350 bits (899), Expect = 7.110e-117
Identity = 206/258 (79.84%), Postives = 216/258 (83.72%), Query Frame = 0
Query:   94 MTGGQNYVVFWTLRPNLSSRLGNVRRSCPPADGVTAIAAESSPEAERAPASNEMVSEAAKHSVFSSAEKAMAETFTCGVAIGYEGGKAGSASAGGAGEEAAGAVVTAVTGTASGAIAVWENFECVKMVLGVHGASAVLCLSPTYSGGFVSGGADGNVCVWDNQLNVKGSIITIRQEGSP----SEAVRAVTVNRKESNMACGTSSGRVIEVSLDSGDTSVLVDGPAPGLPPINNAADGAATAAALNRAAAAVAASPKD 347
            MTGGQNYVVFWTLRPNLSSRLGNVRRSCPPAD  +A AAESS EAERAPASNEMVSEA K S FSSAEKAMAETFTCGVAIG  GGKAGSASAGGAGEEAAGAVVTAVTGTASGAIAVW+N ECVKMVLGVHGA+AVLCLSPTYSGGFVSGGADGNVCVWDNQLNVKGSIITIRQ          A+R +   R    +A        I VSLDSGDT+VLVDGPAPGLPP++NAAD A  AAALN  +AAVAASPKD
Sbjct:    1 MTGGQNYVVFWTLRPNLSSRLGNVRRSCPPADSASATAAESSSEAERAPASNEMVSEATKPSAFSSAEKAMAETFTCGVAIGCGGGKAGSASAGGAGEEAAGAVVTAVTGTASGAIAVWKNLECVKMVLGVHGATAVLCLSPTYSGGFVSGGADGNVCVWDNQLNVKGSIITIRQVHFSYYVLEFAMRGLGELRMRGCVAVWLYFD--IVVSLDSGDTAVLVDGPAPGLPPVDNAADAADAAAALNHTSAAVAASPKD 256          
BLAST of mRNA_Ecto-sp13_S_contig17821.5416.1 vs. uniprot
Match: A0A7S3UW80_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW80_HETAK)

HSP 1 Score: 77.4 bits (189), Expect = 7.280e-12
Identity = 48/115 (41.74%), Postives = 67/115 (58.26%), Query Frame = 0
Query:  200 AVTGTASGAIAVWENFECVKMVLGVHGASAVLCLSPTYSGGFVSGGADGNVCVWDNQLNVKGSIITIRQEGSPSEAVR-AVTVNRKESNMACGTSSGRVIEVSLDSGDTSVLVDG 313
            AVTGTASGA+ VWE     + V G H A AV CL+    GGFVSGG DG V  W  ++    +    R E +PS+ V  AV ++ +++ +A GT+   + E+S+DSG    L +G
Sbjct:  352 AVTGTASGALYVWEGNRVARAVEGAH-ARAVTCLNFADGGGFVSGGRDGRVVWWSPEVEQLAAFDLARLEDAPSDPVPVAVDIDAEQAKVAVGTAGAELYELSVDSGAGCRLGEG 465          
BLAST of mRNA_Ecto-sp13_S_contig17821.5416.1 vs. uniprot
Match: A0A7S2V7Z0_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7Z0_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.610e-11
Identity = 42/114 (36.84%), Postives = 60/114 (52.63%), Query Frame = 0
Query:  201 VTGTASGAIAVWENFECVKMVLGVHGASAVLCLSPTYSGGFVSGGADGNVCVWDNQLNVKGSIITIRQEGSPSEAVR-AVTVNRKESNMACGTSSGRVIEVSLDSGDTSVLVDG 313
            VTGT+SG + VWE  +C   V    G   V C S T  GG ++GG DG + +WDN+L+        + E +P   V  +V +N   S + C T +  + E+S+DSG    LV G
Sbjct:   95 VTGTSSGDLYVWEGHQCASKVAAHSGP--VSCASSTSRGGLITGGKDGKIILWDNELSQLEQFELSKLEPAPLRPVPVSVAMNSHMSKIVCATLAAEIYEISVDSGSACCLVQG 206          
BLAST of mRNA_Ecto-sp13_S_contig17821.5416.1 vs. uniprot
Match: A0A7S4T2T9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T2T9_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 4.730e-8
Identity = 34/104 (32.69%), Postives = 54/104 (51.92%), Query Frame = 0
Query:    2 IWDPATGHRTCVLPASLFGAVRRLSFSPDGSMLCGIGADRDNSLCVWSSASGSWTDGARVALGQGPRRPAMFVAWAAAADGKQVESSPPYQVMTGGQNYVVFWT 105
            IWD  TG +  +LP      ++ ++FSPD   +  +GAD DNS+C+W S SG W D    +  +G      F  + A       +  P + V +GG++++ FWT
Sbjct:  363 IWDAQTGAQIILLPEFHRKGIKCVAFSPDAKKVVSVGADSDNSICIWKSHSGEWHDATMHSNTKGGAYQVFFAQFTA------FDHCPNFLV-SGGKDHINFWT 459          
BLAST of mRNA_Ecto-sp13_S_contig17821.5416.1 vs. uniprot
Match: A0A7S4WDF6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WDF6_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 5.330e-8
Identity = 34/104 (32.69%), Postives = 54/104 (51.92%), Query Frame = 0
Query:    2 IWDPATGHRTCVLPASLFGAVRRLSFSPDGSMLCGIGADRDNSLCVWSSASGSWTDGARVALGQGPRRPAMFVAWAAAADGKQVESSPPYQVMTGGQNYVVFWT 105
            IWD  TG +  +LP      ++ ++FSPD   +  +GAD DNS+C+W S SG W D    +  +G      F  + A       +  P + V +GG++++ FWT
Sbjct:  476 IWDAQTGAQIILLPEFHRKGIKCVAFSPDAKKVVSVGADSDNSICIWKSHSGEWHDATMHSNTKGGAYQVFFAQFTA------FDHCPNFLV-SGGKDHINFWT 572          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17821.5416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G0Y1_ECTSI1.220e-19692.80N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A6H5KFM8_9PHAE7.110e-11779.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3UW80_HETAK7.280e-1241.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2V7Z0_9STRA7.610e-1136.84Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S4T2T9_9STRA4.730e-832.69Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4WDF6_9STRA5.330e-832.69Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 214..254
e-value: 0.18
score: 20.9
coord: 7..49
e-value: 4.6
score: 12.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 12..49
e-value: 0.01
score: 16.7
coord: 221..254
e-value: 0.003
score: 18.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..139
e-value: 4.2E-12
score: 47.7
coord: 199..313
e-value: 1.1E-12
score: 49.3
NoneNo IPR availablePANTHERPTHR13720WD-40 REPEAT PROTEINcoord: 2..313
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17821contigEcto-sp13_S_contig17821:165..3182 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17821.5416.1mRNA_Ecto-sp13_S_contig17821.5416.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17821 165..3206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17821.5416.1 ID=prot_Ecto-sp13_S_contig17821.5416.1|Name=mRNA_Ecto-sp13_S_contig17821.5416.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=347bp
MIWDPATGHRTCVLPASLFGAVRRLSFSPDGSMLCGIGADRDNSLCVWSS
ASGSWTDGARVALGQGPRRPAMFVAWAAAADGKQVESSPPYQVMTGGQNY
VVFWTLRPNLSSRLGNVRRSCPPADGVTAIAAESSPEAERAPASNEMVSE
AAKHSVFSSAEKAMAETFTCGVAIGYEGGKAGSASAGGAGEEAAGAVVTA
VTGTASGAIAVWENFECVKMVLGVHGASAVLCLSPTYSGGFVSGGADGNV
CVWDNQLNVKGSIITIRQEGSPSEAVRAVTVNRKESNMACGTSSGRVIEV
SLDSGDTSVLVDGPAPGLPPINNAADGAATAAALNRAAAAVAASPKD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf