prot_Ecto-sp13_S_contig17661.5343.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17661.5343.1
Unique Nameprot_Ecto-sp13_S_contig17661.5343.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length172
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17661.5343.1 vs. uniprot
Match: A0A6H5L8K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8K1_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 1.240e-111
Identity = 165/173 (95.38%), Postives = 167/173 (96.53%), Query Frame = 0 
Query:    1 MSSAT-VAGDSGEAPAAAAPPMTTWADESIERYTNPIAFARKNTPTPTPELQNEVSLAVPGGKNAKLEIHLLKERSFWSKVSLFWTFRLADVEGDDNAEQMVVALVFDSWTGSIEISENAIVKVDEIQKPIMGGSWITKTDFGRLEIKIVPYWTGEIPVRALARGEGGVHVLR 172
            MSSAT VAGDSGEAPAAA  PMTTW DESIERY+NP+AFARKNTP PTPELQ EVSLAVPGGKNAKLEIHLLKERSFWSKVSLFWTFRLADVEGDDNAEQMVVALVFDSWTGSIEISENAIVKVDEIQKPIMGGSWITKTDFGRLEIKIVPYWTGEIPVRALARGEGGVHVLR
Sbjct:    1 MSSATAVAGDSGEAPAAAGQPMTTWVDESIERYSNPVAFARKNTPMPTPELQKEVSLAVPGGKNAKLEIHLLKERSFWSKVSLFWTFRLADVEGDDNAEQMVVALVFDSWTGSIEISENAIVKVDEIQKPIMGGSWITKTDFGRLEIKIVPYWTGEIPVRALARGEGGVHVLR 173
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BLAST of mRNA_Ecto-sp13_S_contig17661.5343.1 vs. uniprot
Match: D7FVY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY9_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 1.390e-70
Identity = 105/109 (96.33%), Postives = 108/109 (99.08%), Query Frame = 0 
Query:   46 PTPELQNEVSLAVPGGKNAKLEIHLLKERSFWSKVSLFWTFRLADVEGDDNAEQMVVALVFDSWTGSIEISENAIVKVDEIQKPIMGGSWITKTDFGRLEIKIVPYWTG 154
            PTPELQ EVSLAVPGGKNAKLEIHLLKERSFWSKVS+FWTFRL+DVEGDDNAEQMVVALVFDSWTGSIEISENAIVKVDEIQ+PIMGGSWITKTDFGRLEIKIVPYWTG
Sbjct:    2 PTPELQKEVSLAVPGGKNAKLEIHLLKERSFWSKVSIFWTFRLSDVEGDDNAEQMVVALVFDSWTGSIEISENAIVKVDEIQRPIMGGSWITKTDFGRLEIKIVPYWTG 110
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17661.5343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L8K1_9PHAE1.240e-11195.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVY9_ECTSI1.390e-7096.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17661contigEcto-sp13_S_contig17661:183..3139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17661.5343.1mRNA_Ecto-sp13_S_contig17661.5343.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17661 183..3221 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17661.5343.1 ID=prot_Ecto-sp13_S_contig17661.5343.1|Name=mRNA_Ecto-sp13_S_contig17661.5343.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=172bp
MSSATVAGDSGEAPAAAAPPMTTWADESIERYTNPIAFARKNTPTPTPEL
QNEVSLAVPGGKNAKLEIHLLKERSFWSKVSLFWTFRLADVEGDDNAEQM
VVALVFDSWTGSIEISENAIVKVDEIQKPIMGGSWITKTDFGRLEIKIVP
YWTGEIPVRALARGEGGVHVLR
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