prot_Ecto-sp13_S_contig17631.5331.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17631.5331.1
Unique Nameprot_Ecto-sp13_S_contig17631.5331.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length149
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17631.5331.1 vs. uniprot
Match: A0A6H5JQE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQE7_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 4.890e-24
Identity = 70/114 (61.40%), Postives = 75/114 (65.79%), Query Frame = 0 
Query:   36 ETGRFSLFASSTSSVSSRCATEVSPGAGSSDGSMPGGLVGDHRYNERQRRRPPATRQRQRRGRQHLLASNEAESGGAGGAGRGLAARGTNAKDDSIFMGEVSLSRASVLQGTSG 149
            + GRFS FASSTSSVSSRCA EVSP AGS    MPGGLVGDHRY+E+                    A+NE       GAGRG AAR TN KDDSIF GEVSLSRASVL+GTSG
Sbjct: 1840 DAGRFSSFASSTSSVSSRCAAEVSPSAGSXXXXMPGGLVGDHRYDEQXXXXXXXXXXXXXXXXXXXXANNE-------GAGRGRAARRTNTKDDSIFRGEVSLSRASVLKGTSG 1946
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BLAST of mRNA_Ecto-sp13_S_contig17631.5331.1 vs. uniprot
Match: D7FNF2_ECTSI (Similar to photosystem II oxygen evolving complex protein PsbP in Synechococcus n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNF2_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 8.500e-7
Identity = 38/81 (46.91%), Postives = 45/81 (55.56%), Query Frame = 0 
Query:   69 MPGGLVGDHRYNERQRRRPPATRQRQRRGRQHLLASNEAESGGAGGAGRGLAARGTNAKDDSIFMGEVSLSRASVLQGTSG 149
            MPGGLVGDHRY+E+Q+R P                +NEA S      G   AAR T  KD+S+   EVS SRAS L+G SG
Sbjct:    1 MPGGLVGDHRYDEQQQRGPXXXXXXXXXXXXXXXXNNEAGSXXXXXPGSSRAARRTKMKDESVIGAEVSFSRASALKGMSG 81
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17631.5331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQE7_9PHAE4.890e-2461.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNF2_ECTSI8.500e-746.91Similar to photosystem II oxygen evolving complex ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17631contigEcto-sp13_S_contig17631:774..2154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17631.5331.1mRNA_Ecto-sp13_S_contig17631.5331.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17631 774..2174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17631.5331.1 ID=prot_Ecto-sp13_S_contig17631.5331.1|Name=mRNA_Ecto-sp13_S_contig17631.5331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=149bp
MVHTMLTMVPIMVAVTNHYHHGVAAFNLGPRGVPVETGRFSLFASSTSSV
SSRCATEVSPGAGSSDGSMPGGLVGDHRYNERQRRRPPATRQRQRRGRQH
LLASNEAESGGAGGAGRGLAARGTNAKDDSIFMGEVSLSRASVLQGTSG
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