prot_Ecto-sp13_S_contig1758.5300.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1758.5300.1
Unique Nameprot_Ecto-sp13_S_contig1758.5300.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length511
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1758.5300.1 vs. uniprot
Match: A0A835YQG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG9_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.410e-16
Identity = 79/234 (33.76%), Postives = 97/234 (41.45%), Query Frame = 0 
Query:  279 ACREEGKRILDWAVKVFLQPRAILDLQRVWRGYRARTRLAAYLKWLEDRARRRREFQRYLDALAATRGAGGRNSEQVK----RRVWGREEFAHTGWRPRYEVE---KPPNMHDHIWAPPRGSTSGVRTFKVLLPPASERDRLRLTGDRNAWAGVPVGIA--KPRPPPERLGPPPRPGTRTANTIATDGHHYRQQRSISP---SAREDVRDEGE-----VRMKYNWLPAPLVANA 495
            AC  +   ++   V+  L+P A  D+QRV+RG+RAR RL                                           RR WGR  F HTGWRP+           +  H  APPR + +G+R   V LPP +E D   L GD   W GVPV  A  K +PPP  LGPPPRPGT  A                SP   + R +    GE        KY WLPA L+A A
Sbjct:  124 ACAAQVAALVRGGVQRALRPAAARDVQRVFRGHRARARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRRAWGRAAFVHTGWRPQRGAAAAWSAAELEAHAAAPPRATAAGLRVSCVTLPPRTEWDLKLLAGDGAVWVGVPVATAPRKCKPPP--LGPPPRPGTAGA---------------WSPPRLAGRGEAGGAGEGGGHQFVTKYTWLPASLLAGA 340
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1758.5300.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YQG9_9STRA1.410e-1633.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 297..326
score: 8.206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1758contigEcto-sp13_S_contig1758:4428..11172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1758.5300.1mRNA_Ecto-sp13_S_contig1758.5300.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1758 4428..11316 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1758.5300.1 ID=prot_Ecto-sp13_S_contig1758.5300.1|Name=mRNA_Ecto-sp13_S_contig1758.5300.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=511bp
MDKFARKTLRGVSLTFGTLADTLHLPDSIRCCGVGAIEAQIAACDDDDGS
TSDDSVFAIDRESRENNSRGQHSPPRKRKNNRDKTPVAKLPREEKNSGGL
RGMMSSARSLGWGRRRGGDKGGGDDQSQSSQRSGMSFLSGGLRVLSSAGK
NMFKSLGASSPLLDEGTIDASSDLTSLSTTEASYGEEGPRRSVLLWQHVR
MIVRGVRGVRRGVAEGSRLDDTVAFRAARRIQGIFRIKRARRVIARRRSI
ALEALKLGEQLRLQRRRREADARKRYKEACREEGKRILDWAVKVFLQPRA
ILDLQRVWRGYRARTRLAAYLKWLEDRARRRREFQRYLDALAATRGAGGR
NSEQVKRRVWGREEFAHTGWRPRYEVEKPPNMHDHIWAPPRGSTSGVRTF
KVLLPPASERDRLRLTGDRNAWAGVPVGIAKPRPPPERLGPPPRPGTRTA
NTIATDGHHYRQQRSISPSAREDVRDEGEVRMKYNWLPAPLVANAALLQC
AKSEESDPMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS