prot_Ecto-sp13_S_contig17526.5272.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17526.5272.1
Unique Nameprot_Ecto-sp13_S_contig17526.5272.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length227
Homology
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: D8LKI6_ECTSI (ABC transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKI6_ECTSI)

HSP 1 Score: 299 bits (766), Expect = 3.360e-100
Identity = 191/230 (83.04%), Postives = 199/230 (86.52%), Query Frame = 0
Query:    1 FVQDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDPSLLAGKASSAGGAAVSVSGGGGKNSGLSDGGVL-AAGGVVNTGEVVENHNVSPDG----TVEGSKARGVVGMLRRXXXXXXXXXXXXXXXXXXXXXXXXXXVSAEHDAASVLKTPGVTGRVAAPMPLRAGK 225
            FVQDNVP+CLWWLKDASMIKQAFEALCVNELKGLEFECDNKSR PCIRTGEQMLERVAFGESTVEGAT+GL+KILGSCWALTY ALVLGKPRFQTMLDPSLLAGK+S               NSGL DGG+L A+G VVNTGEVVENH+ SPDG    TV+GSKARGVVGMLR XXXXXXXXXXXXXXXXXXXXXX    VSAEHDAASVLKT GVTGRVAAPMPLRAGK
Sbjct:    8 FVQDNVPQCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRAPCIRTGEQMLERVAFGESTVEGATIGLSKILGSCWALTYLALVLGKPRFQTMLDPSLLAGKSSXXXXXXXXXXXXXXXNSGLLDGGLLLASGDVVNTGEVVENHDGSPDGGRSSTVKGSKARGVVGMLRXXXXXXXXXXXXXXXXXXXXXXXA---VSAEHDAASVLKTSGVTGRVAAPMPLRAGK 234          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: A0A836CJY0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJY0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.280e-24
Identity = 55/103 (53.40%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    3 QDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKS--RGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDPSLLA 103
            QDNVP+ L  LK+AS+IK AFE + VNE+   +F C + S  RGPCI+TGEQML+R+ FG+STV  +   L KIL + + LTYF LV  +P++Q MLDP  +A
Sbjct:  508 QDNVPRLLRPLKEASLIKWAFEGMSVNEMNDTKFLCHDASFKRGPCIQTGEQMLDRIGFGKSTVRNSVQALAKILLASYTLTYFGLVASRPKYQPMLDPDEVA 610          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: A0A836CL29_9STRA (ABC-2 type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL29_9STRA)

HSP 1 Score: 108 bits (271), Expect = 4.830e-24
Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 0
Query:    3 QDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKS--RGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDPSLLA 103
            QDNVP+ L  LK+AS+IK AFE + VNE+   +F C + S  RGPCI+TGEQML+R+ FG+STV  +   L KIL + + LTY  LV  +P++Q MLDP  +A
Sbjct:  320 QDNVPRLLRPLKEASLIKWAFEGMSVNEMNDTKFLCHDASFKRGPCIQTGEQMLDRIGFGDSTVRNSVQALAKILLASYTLTYLGLVASRPKYQPMLDPDEVA 422          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: A0A4D9D0J8_9STRA (ABC transporter domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0J8_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.520e-17
Identity = 46/99 (46.46%), Postives = 64/99 (64.65%), Query Frame = 0
Query:    3 QDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNK--SRGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDP 99
            + +VP  L W++D S+IK AFEALC+NE +GLEFE + +     P +  GEQ+L+R+ F ESTV  A V  + + G  + LTY  L L KP+FQ +L P
Sbjct:  597 EKSVPVALRWIQDVSLIKYAFEALCINEFQGLEFEQEKRLGPGPPQVAKGEQVLQRLNFHESTVTRAVVRQSALAGVSYLLTYLMLALKKPKFQRVLSP 695          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: A0A7S2S291_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S291_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.980e-16
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0
Query:    3 QDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDPS 100
            +D+ PK L WL   S+++  FEAL VNE   LEF C + +RGPC++TGE+ L RVA   ++V GA +   +IL   +  TY AL   +P F  M  P+
Sbjct:  122 EDSTPKYLRWLPKMSLVRWGFEALSVNEFTDLEFTCKD-ARGPCLKTGEEALGRVALERASVRGAVMAQARILAGSYIGTYAALRASRPSFAKMHPPT 218          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: R7QTJ3_CHOCR (Uncharacterized protein (Fragment) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTJ3_CHOCR)

HSP 1 Score: 85.9 bits (211), Expect = 9.790e-16
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    4 DNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDPSLL 102
            +NVP    W+   S+IK A+EALCVNE +G+EFE         +RTGEQ+L+R+ +GESTV  A + L+KIL   +  TY  L L KP+F+  L P L+
Sbjct:  437 ENVPAWASWIPRVSLIKHAYEALCVNEFRGIEFEAKESWD---VRTGEQVLQRMTWGESTVSKACLRLSKILAFNYLATYAILTLKKPKFEK-LQPVLV 531          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: A0A6T0FSZ2_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A6T0FSZ2_EMIHU)

HSP 1 Score: 84.7 bits (208), Expect = 1.360e-15
Identity = 41/97 (42.27%), Postives = 54/97 (55.67%), Query Frame = 0
Query:    3 QDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDP 99
            +++ P+ L W+   S I+   E L VNE  GL F C   +RGPC  TGEQ LERV+FG STV GA V   K++G  +  T   L    P+F  +  P
Sbjct:  196 EESTPRALRWIPKVSFIRWCSEGLAVNEFSGLRFSCKG-ARGPCCETGEQALERVSFGGSTVRGAAVAQAKLVGGLYVATLLVLRRSSPKFLRVEPP 291          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: A0A7S2S2A1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2A1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 3.590e-15
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0
Query:    3 QDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDPS 100
            +D+ PK L WL   S+++  FEAL VNE   LEF C + +RGPC++TGE+ L RVA   ++V GA +   +IL   +  TY AL   +P F  M  P+
Sbjct:  581 EDSTPKYLRWLPKMSLVRWGFEALSVNEFTDLEFTCKD-ARGPCLKTGEEALGRVALERASVRGAVMAQARILAGSYIGTYAALRASRPSFAKMHPPT 677          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: E1Z6R9_CHLVA (ABC transporter domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z6R9_CHLVA)

HSP 1 Score: 84.0 bits (206), Expect = 4.910e-15
Identity = 41/97 (42.27%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    3 QDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDP 99
            + NVP  L WL  AS+IKQAFE  CVNE +G EFE D +  G    TG+++LER++FG+S++        +I+ + + LTY  LV  +P++Q ++ P
Sbjct:  612 ESNVPGPLKWLPSASLIKQAFEGSCVNEFRGAEFELDERGHGTA--TGDEVLERLSFGDSSLRRTLASQGRIMLTYYWLTYCILVRKQPKYQPLMMP 706          
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Match: R1BTT3_EMIHU (ABC transporter domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BTT3_EMIHU)

HSP 1 Score: 83.6 bits (205), Expect = 6.150e-15
Identity = 40/91 (43.96%), Postives = 52/91 (57.14%), Query Frame = 0
Query:    3 QDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRGPCIRTGEQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRF 93
            +++ P+ L W+   S I+   E L VNE  GL F C   +RGPC  TGEQ LERV+FG STV GA V   K++G  +  T   L    P+F
Sbjct:  465 EESTPRALRWIPKVSFIRWCSEGLAVNEFSGLRFSCKG-ARGPCCETGEQALERVSFGGSTVRGAAVAQAKLVGGLYVATLLVLRRSSPKF 554          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17526.5272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKI6_ECTSI3.360e-10083.04ABC transporter n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A836CJY0_9STRA2.280e-2453.40P-loop containing nucleoside triphosphate hydrolas... [more]
A0A836CL29_9STRA4.830e-2452.43ABC-2 type transporter-domain-containing protein n... [more]
A0A4D9D0J8_9STRA1.520e-1746.46ABC transporter domain-containing protein n=2 Tax=... [more]
A0A7S2S291_9STRA2.980e-1642.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
R7QTJ3_CHOCR9.790e-1646.46Uncharacterized protein (Fragment) n=1 Tax=Chondru... [more]
A0A6T0FSZ2_EMIHU1.360e-1542.27Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S2S2A1_9STRA3.590e-1542.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
E1Z6R9_CHLVA4.910e-1542.27ABC transporter domain-containing protein n=1 Tax=... [more]
R1BTT3_EMIHU6.150e-1543.96ABC transporter domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17526contigEcto-sp13_S_contig17526:251..2150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17526.5272.1mRNA_Ecto-sp13_S_contig17526.5272.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17526 251..2150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17526.5272.1 ID=prot_Ecto-sp13_S_contig17526.5272.1|Name=mRNA_Ecto-sp13_S_contig17526.5272.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=227bp
FVQDNVPKCLWWLKDASMIKQAFEALCVNELKGLEFECDNKSRGPCIRTG
EQMLERVAFGESTVEGATVGLTKILGSCWALTYFALVLGKPRFQTMLDPS
LLAGKASSAGGAAVSVSGGGGKNSGLSDGGVLAAGGVVNTGEVVENHNVS
PDGTVEGSKARGVVGMLRRRAEHRRRRRHRRRRRRRGAVTSAAAAVSAEH
DAASVLKTPGVTGRVAAPMPLRAGKY*
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