prot_Ecto-sp13_S_contig1732.5170.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1732.5170.1
Unique Nameprot_Ecto-sp13_S_contig1732.5170.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length222
Homology
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: D7FKS2_ECTSI (50S ribosomal protein l19-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKS2_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 1.330e-141
Identity = 209/221 (94.57%), Postives = 212/221 (95.93%), Query Frame = 0
Query:    1 MLCNTACRLATRLVGSRERGVAAIGRNLAVQEAASSHLPSAAAGGSRVLGESSAARWRWASTQATQTVVEGIILNVDEKVQRLKHRIPQKRASFLLNELRQEQRNGERCELPNMKIGDAVEVTMYANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRITGGGGSDN 221
            MLCNTACRLATRLVGSRERGV AI RNLAV EAASSHLPSAAAGGSR  GE+SA RWRWAS QATQT VEGI LNVDEKVQRLKHRIPQKRASFLLNELRQEQRNGERCELP+MKIGDA+EVTMYANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRITGGGGSDN
Sbjct:    1 MLCNTACRLATRLVGSRERGVVAISRNLAVHEAASSHLPSAAAGGSRAPGEASAGRWRWASMQATQTAVEGITLNVDEKVQRLKHRIPQKRASFLLNELRQEQRNGERCELPDMKIGDAIEVTMYANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRITGGGGSDN 221          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: A0A835ZJ13_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ13_9STRA)

HSP 1 Score: 124 bits (310), Expect = 9.640e-32
Identity = 58/134 (43.28%), Postives = 90/134 (67.16%), Query Frame = 0
Query:   82 RLKHRIPQKRASFLLNELRQEQRNGERCELPNMKIGDAVEVTMYANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRITG 215
            R+KH+IP+KRAS LL  +++E       + P+ K GDA+E  M     A +   VRG++L +  +GI SS ++RDV+    +E  +PL+SPL++S+ V++   IY+GK  GKRVRP++IYY+R+LD K  ++TG
Sbjct:   52 RIKHKIPEKRASMLLGFVQKEAIAARPLDFPDFKTGDAIECQMLPYMTAPKAEPVRGIVLGRFKRGIASSFIVRDVLYDEAIERRVPLYSPLLKSITVLKRRAIYEGKQEGKRVRPSKIYYLRNLDNKYSQVTG 185          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: B8BTE2_THAPS (50S ribosomal protein l19-like protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTE2_THAPS)

HSP 1 Score: 99.8 bits (247), Expect = 1.160e-22
Identity = 55/141 (39.01%), Postives = 90/141 (63.83%), Query Frame = 0
Query:   84 KHRIPQKRASFLLNELRQEQRNGERCELPNM-----KIGDAVEVTMYA-----NKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRIT 214
            K + P+KRAS L N+L+ E  N  +   P +     K+GDAVE+ +       N +  +  ++RGV+L + N+G+D+SI L+DV+ G  VE  I L SP++++++V+E  F+ +GK +GKRVR A++YY+RD   +  R+T
Sbjct:   10 KFKNPRKRASKLFNQLKLEAVNKSKESKPEVWNVPFKVGDAVELQVLDSGGVDNPQNKKLDKIRGVVLGRENRGMDTSIYLKDVLFGEHVERKIKLHSPMVKTLKVLEEGFVNRGKRKGKRVRRAKLYYLRDRKPEETRVT 150          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: A0A7S2P9J5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P9J5_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.910e-22
Identity = 54/141 (38.30%), Postives = 88/141 (62.41%), Query Frame = 0
Query:   84 KHRIPQKRASFLLNELRQEQRNGERCELPNM-----KIGDAVEVTMY-----ANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRIT 214
            K + P+KRAS L NEL+ E     +   P +     K+GDAVE+ +       N +  R  ++RGV+L + NKG+D+ I L+DV+ G  VE  + L SP+++S++V+E  F+ +GK +G+RV+ A++YY+RD   +  R+T
Sbjct:   24 KFKNPRKRASKLFNELKLEAVADSKSSKPEVWEVPFKVGDAVELEVLDSGGVQNPQNKRYDKIRGVVLGRENKGLDTGIYLKDVLFGEHVERKVKLHSPMVKSLKVLEEGFVNRGKKKGRRVKRAKLYYLRDRKPEETRVT 164          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: A0A1Z5JBA1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBA1_FISSO)

HSP 1 Score: 99.4 bits (246), Expect = 2.140e-22
Identity = 56/137 (40.88%), Postives = 88/137 (64.23%), Query Frame = 0
Query:   84 KHRIPQKRASFLLNELRQEQRNGERCELPNM-----KIGDAVEVTM-YANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRIT 214
            K + P+KRAS LL EL+ E     +   P++     ++GDA+E+ +   N +     ++RGV+L    KG+D S+LLRDV+ G PVE  I L SPL+QSV+++E  F+Y+GK + KR   A++Y++RD + +L R+T
Sbjct:   51 KFKSPRKRASKLLQELQGELVKSNKANKPDVWGTHFRVGDAIELVIGRENAEKNEIEKIRGVVLGISRKGLDHSVLLRDVVFGQPVERRILLHSPLLQSVKLLEENFVYKGKRKVKR---AKLYFLRDRNPELTRVT 184          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: A0A7R9UET9_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 4.320e-22
Identity = 50/133 (37.59%), Postives = 84/133 (63.16%), Query Frame = 0
Query:   83 LKHRIPQKRAS----FLLNELRQEQRNGERCELPNMKIGDAVEVTMYANKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLY 211
            LKH  P+K+A+     L NE+++E R  +  ELP+ ++GD V V+    K   +     GV++    KG+D SIL+R V+ G+  E  +PL+SPL+++VE++E   I++GK  G+RVR +++YY+R+ +   Y
Sbjct:   68 LKHVGPRKKANKVMTTLANEMKKELRQRQGIELPDYRVGDKVRVSFLQAKSEEKPDDYVGVIIANPKKGVDESILVRGVVKGDCFEVRVPLWSPLLKAVEILEPRCIHKGKKAGRRVRRSKLYYLRNREPSTY 200          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: A0A7S2ID41_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2ID41_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 5.760e-22
Identity = 53/139 (38.13%), Postives = 89/139 (64.03%), Query Frame = 0
Query:   84 KHRIPQKRASFLLNELRQEQRNGERCELPNM-----KIGDAVEVTMYANKKATRTS---QVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRIT 214
            K + P+KRAS L ++L QE     +   PN+     ++GDA+E+ + +      TS   ++RGV+L K NKG+ SS+ +RDV+ G P++  +PL SPL++S++V+E  F+++GK   K+V+ A++YY+RD      R+T
Sbjct:    8 KFKSPRKRASKLFHQLNQEAITKSKSSNPNVLNVPFRVGDAIEIELISMGGVNSTSNIDKIRGVVLGKSNKGLGSSVQIRDVMYGEPIDRQVPLHSPLLKSLKVLEKNFVHKGK---KKVKRAKLYYLRDRLPVETRVT 143          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: A0A7S1GN95_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GN95_CYCTE)

HSP 1 Score: 98.2 bits (243), Expect = 5.800e-22
Identity = 53/138 (38.41%), Postives = 88/138 (63.77%), Query Frame = 0
Query:   84 KHRIPQKRASFLLNELRQEQRNGERCELP-----NMKIGDAVEVTMYANKKAT--RTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRIT 214
            K + P+KRAS L  EL  E     + E P     N ++GD+VE+ M         +  +VRG+++ KVN+G+ SS+++RDV+ G PVE  IPL+SP+++S++++E  F+++GK + KR   A++YY+R+     YR+T
Sbjct:   49 KFKSPRKRASQLFEELNNEAVKKAKEEKPDVFAENPRVGDSVELEMVGEGGTLEGKLEKVRGLVIGKVNRGLASSLIVRDVVFGEPVEWKIPLYSPMVKSLKILERNFVFKGKRKVKR---AKLYYLRERSPNEYRVT 183          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: A0A7S3MA30_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MA30_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 9.020e-22
Identity = 54/136 (39.71%), Postives = 87/136 (63.97%), Query Frame = 0
Query:   82 RLKHRIPQKRASFLLNELRQEQRNGERC--ELPNMKIGDAVEVTMYANKKATRTSQVRGVLLRKVNKGI--DSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRI 213
            R +H+IPQKRAS L+  L++E     +   E P+   GDA+E+       AT    ++GV++ + NK +  D+S+LL +V +G  VE  IP++SPLI+ ++V++ AFI++GK   KRVR +++YY+ DL  K Y +
Sbjct:   29 RTRHKIPQKRASNLMTILKEEGLQALKAGREWPDFSAGDAIEIHKLPYMSATVPDVIKGVVIGRFNKHMRMDASLLLLNVESGTKVERRIPIYSPLIKDIKVIQKAFIHKGK---KRVRRSKLYYLSDLHPKFYTV 161          
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Match: K0SBD7_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SBD7_THAOC)

HSP 1 Score: 98.2 bits (243), Expect = 4.660e-21
Identity = 56/141 (39.72%), Postives = 87/141 (61.70%), Query Frame = 0
Query:   84 KHRIPQKRASFLLNELRQEQRNGERCELPNM-----KIGDAVEVTMYA-----NKKATRTSQVRGVLLRKVNKGIDSSILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARIYYIRDLDQKLYRIT 214
            K + P+KRAS L NEL+ E         P +     K+GDAVE+ +       N       ++RGV+L + NKG+D+SI LRDV+ G PVE  + L SPL++S++V+E  F+ +G+ +G+RV+ A++YY+RD   +  R+T
Sbjct:  139 KFKSPRKRASKLFNELQVETVANSTKSKPAVWEVPFKVGDAVELEILDSGGVDNPNNRPLEKIRGVVLGRHNKGLDTSINLRDVLFGEPVERKVKLHSPLVKSLKVLEEGFVNRGRRKGRRVKRAKLYYLRDRKPEETRVT 279          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1732.5170.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKS2_ECTSI1.330e-14194.5750S ribosomal protein l19-like protein n=2 Tax=Ect... [more]
A0A835ZJ13_9STRA9.640e-3243.28Translation protein SH3-like domain-containing pro... [more]
B8BTE2_THAPS1.160e-2239.0150S ribosomal protein l19-like protein n=1 Tax=Tha... [more]
A0A7S2P9J5_9STRA1.910e-2238.30Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5JBA1_FISSO2.140e-2240.88Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7R9UET9_9STRA4.320e-2237.59Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2ID41_9STRA5.760e-2238.13Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1GN95_CYCTE5.800e-2238.41Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S3MA30_9STRA9.020e-2239.71Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
K0SBD7_THAOC4.660e-2139.72Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038657Ribosomal protein L19 superfamilyGENE3D2.30.30.790coord: 95..214
e-value: 3.0E-16
score: 61.4
IPR001857Ribosomal protein L19PFAMPF01245Ribosomal_L19coord: 99..213
e-value: 4.9E-28
score: 97.3
IPR001857Ribosomal protein L19PANTHERPTHR15680RIBOSOMAL PROTEIN L19coord: 66..211
NoneNo IPR availablePANTHERPTHR15680:SF939S RIBOSOMAL PROTEIN L19, MITOCHONDRIALcoord: 66..211
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 103..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1732contigEcto-sp13_S_contig1732:1259..7370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1732.5170.1mRNA_Ecto-sp13_S_contig1732.5170.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1732 1259..7370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1732.5170.1 ID=prot_Ecto-sp13_S_contig1732.5170.1|Name=mRNA_Ecto-sp13_S_contig1732.5170.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp
MLCNTACRLATRLVGSRERGVAAIGRNLAVQEAASSHLPSAAAGGSRVLG
ESSAARWRWASTQATQTVVEGIILNVDEKVQRLKHRIPQKRASFLLNELR
QEQRNGERCELPNMKIGDAVEVTMYANKKATRTSQVRGVLLRKVNKGIDS
SILLRDVINGNPVEHHIPLFSPLIQSVEVMETAFIYQGKLRGKRVRPARI
YYIRDLDQKLYRITGGGGSDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038657L19_sf
IPR001857Ribosomal_L19
IPR008991Translation_prot_SH3-like_sf