prot_Ecto-sp13_S_contig1726.5130.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1726.5130.1
Unique Nameprot_Ecto-sp13_S_contig1726.5130.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length239
Homology
BLAST of mRNA_Ecto-sp13_S_contig1726.5130.1 vs. uniprot
Match: A0A6H5KAV0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAV0_9PHAE)

HSP 1 Score: 423 bits (1088), Expect = 5.190e-149
Identity = 217/238 (91.18%), Postives = 221/238 (92.86%), Query Frame = 0
Query:    1 MSDPKGSAPPIEEPYYASSYQQGSNAAAVAPAPGPTTDDEGLAQRLQQEEFRNALPTARGMPVQPGAPGTQYVAIFPPSVPFDPADLGVAGSMAPHEEKLMEASSLAKTIRLLAVLDGLILVINCGYFPVLLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEGYIWFIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPTGVWSGQYHRQXXXXXXXQPFQSL 238
            MSDPKGS PPI+EPYYASSYQQGSNAAAVAPAPGPTT+DE LAQRLQQEE+RNALP ARGMPVQPGAPGTQYVAIFPPSVPFDPADLGVAG MAPHE KLMEASSLAKTIR LAV DGLILVINCGYFP+LLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEGY WFIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPT VWSGQY RQ       QPFQSL
Sbjct:    1 MSDPKGSDPPIDEPYYASSYQQGSNAAAVAPAPGPTTNDEDLAQRLQQEEYRNALPAARGMPVQPGAPGTQYVAIFPPSVPFDPADLGVAGFMAPHEAKLMEASSLAKTIRWLAVFDGLILVINCGYFPMLLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEGYFWFIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPTAVWSGQYRRQHQNQ---QPFQSL 235          
BLAST of mRNA_Ecto-sp13_S_contig1726.5130.1 vs. uniprot
Match: A0A6V1TFA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TFA5_HETAK)

HSP 1 Score: 103 bits (256), Expect = 3.110e-23
Identity = 61/189 (32.28%), Postives = 108/189 (57.14%), Query Frame = 0
Query:   36 TTDDEGLAQRLQQEEFRNALPTARGMPV-----QPGAPGTQYVAIFPPSVPFDPADLGVAGSMAPHEEKLMEASSLAKTIRLLAVLDGLILVINCGYFPVLLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEGYIWFIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPTGVWS 219
            T +DEG A +LQQEE   A      +PV     Q      + +A+   + P  P       ++  HE +L+E  SL + +R++A++DG+IL+ +C  FPV  +L+ WGPL+G++  + +  ++   Y  YY+L+++  + ++  G  WF+ +  + L+IAR ++  A +L   +PAE+E LR P+ +WS
Sbjct:   37 TANDEGFAYKLQQEEMVGA----HSVPVYASHAQDSQALEEGLAVLAGTAPLLPGPQAEGMALGDHERRLLETYSLGRGVRVIALIDGMILLFDCLLFPVFFVLM-WGPLAGYLGSSYFRFSFVTCYFLYYVLKMAADIIFILYGAWWFLAVLVIDLWIARWVYMLAALLWVANPAELEALRAPSHMWS 220          
BLAST of mRNA_Ecto-sp13_S_contig1726.5130.1 vs. uniprot
Match: A0A836CJB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB9_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.150e-9
Identity = 50/163 (30.67%), Postives = 84/163 (51.53%), Query Frame = 0
Query:   64 QPGAPGTQYVAIFPPSVPFDPADLGVAGSMAPH--EEKLMEASSLAKTIRLLAVLDGLILVINCGYF--P---VLLLLLLWGPLSGWMAGTRYSTAWTYAYCCYYLLRLSTYLSYVFEGYIWFIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRN-PTGVW 218
            Q G P  Q    + P+  F      VAG +     +E+LME  SLA++I++L+++D ++L  N  +F  P   +++L L WGP  G+ +   Y       Y  YY++++ T +  +F    W I   A+  YI R ++ + K L   SP+E+E L++ P   W
Sbjct:   11 QKGTPSFQQS--YFPTPDFPSVQAVVAGVVEGQGDDERLMETYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGFWSIIPLAIDSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAW 171          
BLAST of mRNA_Ecto-sp13_S_contig1726.5130.1 vs. uniprot
Match: D8LQC7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC7_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 9.760e-7
Identity = 45/149 (30.20%), Postives = 80/149 (53.69%), Query Frame = 0
Query:   80 VPFDPADLGVAGSMAPHEEKLMEASSLAKTIRLLAVLDGLILVINCGYFPVLLLLLLWGPLSGWMAGT-RYSTAWTYAYCCYYLLRLSTYLSYVFEG-----YIWFIFLFALSLYIARVIWRFAKVLDTLSPAEIEQLRNPTGVWSGQY 222
            V F P      G+  P E  LM     ++ +R+LA+LD +I++     F  L+L++ WGP++G++A   R   A+T+ +  YY LR+S  + ++  G      +W +FLF   +  + +++ F  +L   S AE+E LR+P   W+  +
Sbjct:   72 VQFSPPAPSFPGTPRPSES-LMACHRYSRVVRVLAILDAIIVLCGASAFTPLILMI-WGPIAGYLASNFRLRAAFTFLF--YYGLRISWDIGWILSGGIKWVVVW-VFLFT-DVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASAF 214          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1726.5130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KAV0_9PHAE5.190e-14991.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1TFA5_HETAK3.110e-2332.28Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CJB9_9STRA1.150e-930.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LQC7_ECTSI9.760e-730.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..174
NoneNo IPR availableTMHMMTMhelixcoord: 167..189
NoneNo IPR availableTMHMMTMhelixcoord: 118..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1726contigEcto-sp13_S_contig1726:4039..8804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1726.5130.1mRNA_Ecto-sp13_S_contig1726.5130.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1726 3906..9758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1726.5130.1 ID=prot_Ecto-sp13_S_contig1726.5130.1|Name=mRNA_Ecto-sp13_S_contig1726.5130.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=239bp
MSDPKGSAPPIEEPYYASSYQQGSNAAAVAPAPGPTTDDEGLAQRLQQEE
FRNALPTARGMPVQPGAPGTQYVAIFPPSVPFDPADLGVAGSMAPHEEKL
MEASSLAKTIRLLAVLDGLILVINCGYFPVLLLLLLWGPLSGWMAGTRYS
TAWTYAYCCYYLLRLSTYLSYVFEGYIWFIFLFALSLYIARVIWRFAKVL
DTLSPAEIEQLRNPTGVWSGQYHRQQQQQQQQQPFQSL*
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