prot_Ecto-sp13_S_contig17203.5102.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17203.5102.1
Unique Nameprot_Ecto-sp13_S_contig17203.5102.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length357
Homology
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: A0A6H5JNL3_9PHAE (AraC_E_bind domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNL3_9PHAE)

HSP 1 Score: 709 bits (1831), Expect = 2.520e-257
Identity = 337/356 (94.66%), Postives = 345/356 (96.91%), Query Frame = 0
Query:    1 MTEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKIIPFVSVRDCSAYMTFLTDALGAEVLYPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDASKVEASMTISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSNEDMAKDMEIGAKYDWRYTWAVEDMPTVYCYGAMSTCEATGPAISEKTNKTLPAAFAGAAAAGLAMAGPPTSAYYTWDSSPGGTTKFTCGPSVAGGGVSALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDQLMKCYKATFEWVETKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGTTPKA 356
            M EQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPK+LARKIIPFVSVRDCSAYMTF+TDALGAEV+YPPAKDPTGKIMCAE+KINGGIIM+GDHC +DASK EASMTISHEVGKDEAGPLAKSFKDNGGE+LEEVSMQFWGQVWGRCKDPFGQPWGLCEVQ GP  SNEDMAKDMEIGAKYDWRYTWAVEDMPTVYCYGAMST EATGPAISE+TNKTLPAAFAGAAAAGLAMAGPP SAYYTWD SPGGTTKFTCGPSVAGGG SALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDQLMKCYKATFEWVETKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGT PKA
Sbjct:   58 MAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKKLARKIIPFVSVRDCSAYMTFVTDALGAEVVYPPAKDPTGKIMCAELKINGGIIMVGDHCGEDASKTEASMTISHEVGKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQTGPTTSNEDMAKDMEIGAKYDWRYTWAVEDMPTVYCYGAMSTSEATGPAISEETNKTLPAAFAGAAAAGLAMAGPPASAYYTWDPSPGGTTKFTCGPSVAGGGASALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDQLMKCYKATFEWVETKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGTGPKA 413          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: A0A6H5L888_9PHAE (VOC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L888_9PHAE)

HSP 1 Score: 681 bits (1757), Expect = 4.340e-245
Identity = 328/356 (92.13%), Postives = 337/356 (94.66%), Query Frame = 0
Query:    1 MTEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKIIPFVSVRDCSAYMTFLTDALGAEVLYPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDASKVEASMTISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSNEDMAKDMEIGAKYDWRYTWAVEDMPTVYCYGAMSTCEATGPAISEKTNKTLPAAFAGAAAAGLAMAGPPTSAYYTWDSSPGGTTKFTCGPSVAGGGVSALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDQLMKCYKATFEWVETKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGTTPKA 356
            M EQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKIIPFVSVRDCSAYMTFLTDALGAEV+YPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDASK EASMTI++EVGKDEAGPLAKSFKDNGGE+LEEVSMQFWGQVWGRC DPFGQP  LCEVQEGP PSNEDMAKDMEIGAKY+WRY W VEDMP VYCYGAMST  A GPAISE+ NKTLPAAFAGAAAAGLAMAGPP SAYYTWDSSPGGTTKFTCGPSVAGGG SALMKDV+GDD GLGVRTAGGCKCVTTLHTGPYD+L KCY+ATFEWVE KGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGT PKA
Sbjct:  119 MAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKIIPFVSVRDCSAYMTFLTDALGAEVVYPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDASKTEASMTIAYEVGKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCHDPFGQPXXLCEVQEGPPPSNEDMAKDMEIGAKYNWRYNWVVEDMPIVYCYGAMSTSAANGPAISEEINKTLPAAFAGAAAAGLAMAGPPASAYYTWDSSPGGTTKFTCGPSVAGGGASALMKDVNGDDIGLGVRTAGGCKCVTTLHTGPYDELKKCYEATFEWVEAKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGT-PKA 473          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: D8LJ97_ECTSI (AraC family transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ97_ECTSI)

HSP 1 Score: 525 bits (1353), Expect = 9.670e-187
Identity = 251/275 (91.27%), Postives = 259/275 (94.18%), Query Frame = 0
Query:   82 MKINGGIIMLGDHCSKDASKVEASMTISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSNEDMAKDMEIGAKYDWRYTWAVEDMPTVYCYGAMSTCEATGPAISEKTNKTLPAAFAGAAAAGLAMAGPPTSAYYTWDSSPGGTTKFTCGPSVAGGGVSALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDQLMKCYKATFEWVETKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGTTPKA 356
            MKINGGI+MLGDHCSKDASK EASMT+S+EV KDEAGPLAKSFKDNGGE+LEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSNEDMAKDMEIGAKYDW YTW VEDMPTVYCYGAMST  A  PAISE+T KTLPAAFAGAAAAGLAMAGPP SA+YTWD SPGGTTKFT GPSVAGGG SALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYD+L KCY+ATFEWVE KGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGT PKA
Sbjct:    1 MKINGGIVMLGDHCSKDASKTEASMTVSYEVRKDEAGPLAKSFKDNGGEVLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSNEDMAKDMEIGAKYDWHYTWVVEDMPTVYCYGAMSTSAANTPAISEETKKTLPAAFAGAAAAGLAMAGPPASAFYTWDPSPGGTTKFTSGPSVAGGGASALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDELKKCYEATFEWVEAKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAKGT-PKA 274          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: D8LJ96_ECTSI (Glyoxalase family protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ96_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 7.390e-17
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 0
Query:    1 MTEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKI 41
            M EQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKI
Sbjct:  154 MAEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKI 194          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: UPI001556A403 (VOC family protein n=1 Tax=Pseudoruegeria sp. HB172150 TaxID=2721164 RepID=UPI001556A403)

HSP 1 Score: 79.3 bits (194), Expect = 2.640e-14
Identity = 45/130 (34.62%), Postives = 72/130 (55.38%), Query Frame = 0
Query:   36 ELARKIIPFVSVRDCSAYMTFLTDALGAEVLYPPAKDPTGKIMCAEMKINGGIIMLGDHCSK---DASKVEASMTISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQE 162
            EL R ++P+++++D +  ++F   A GAE++  P  D  GKIM A + IN G IML D+       ++K + SMT+   V  D+         + G E+ +E  ++FWG  +GR +DPFG  W + E  E
Sbjct:    8 ELMRGVLPYLAIKDAADAISFYKVAFGAEMIGEPYADEQGKIMNASLAINDGTIMLMDNNEAYGIASAKGDRSMTLQLVV--DDGTAWWNRALEAGCEVSQEYKLEFWGDYYGRIRDPFGLEWAILEPGE 135          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: A0A2V7X1W6_9BACT (Glyoxalase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7X1W6_9BACT)

HSP 1 Score: 73.9 bits (180), Expect = 3.290e-12
Identity = 49/138 (35.51%), Postives = 69/138 (50.00%), Query Frame = 0
Query:   41 IIPFVSVRDCSAYMTFLTDALGAEVLYPPAKDPTGKIMCAEMKINGGIIMLGDHC----SKDASKVEASMTISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEGPAPSNEDMAKD 174
            + PF++V+DC+  + F   A GAE     AKDP+GK+M AE+KI   +IM+ D      +     V  S    H    D  G  A++ K  G ++   V  QFWG  +GR KDPFG  W +       A   +DM+ D
Sbjct:   13 VTPFMTVKDCARAIEFYKQAFGAEER-GIAKDPSGKVMHAEIKIGDSVIMMADEFPDFGALSPESVGGSSMGLHIYVTDVDGAFARAVKA-GAKVEMPVMDQFWGDRYGRLKDPFGHKWSI-------ATHVKDMSSD 141          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: UPI000F83A009 (GyrI-like domain-containing protein n=1 Tax=Sulfuriflexus mobilis TaxID=1811807 RepID=UPI000F83A009)

HSP 1 Score: 72.0 bits (175), Expect = 1.500e-11
Identity = 34/80 (42.50%), Postives = 48/80 (60.00%), Query Frame = 0
Query:  268 LMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDQLMKCYKATFEWVETKGYESRMPVFELYENDPKDTPPEKLKTKVCIPI 347
            +  ++ G DN     T  G K V+ LH GPY  +   Y A F+W++  GYE+    +E+Y NDP  TPPEKL+TK+ +PI
Sbjct:   73 ISTNLTGRDNIHSNETPSG-KSVSCLHIGPYSDVESTYNALFKWIKDSGYEATGVAYEMYLNDPDQTPPEKLETKIFLPI 151          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: A0A0F2P6N2_9HYPH (VOC domain-containing protein n=1 Tax=Hoeflea sp. BRH_c9 TaxID=1629712 RepID=A0A0F2P6N2_9HYPH)

HSP 1 Score: 69.3 bits (168), Expect = 9.950e-11
Identity = 38/125 (30.40%), Postives = 59/125 (47.20%), Query Frame = 0
Query:   35 KELARKIIPFVSVRDCSAYMTFLTDALGAEVLYPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDASKVEASMTISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDPFGQPWGLCE 159
            K L R +IP+ +V      + F T A GA     P +   G+++ A ++INGG++ML D   +  S+  A      ++   +           G E+L    ++FWG  WGR +DPFG  W   E
Sbjct:    8 KRLMRGVIPYATVDGVDKAIEFYTRAFGAVAHGEPVRSEDGRVLNASIEINGGMVMLMDPFPEHGSQPSAGSNFLLQLVIADGDLWWDRAVKAGCEVLSPFKLEFWGDRWGRVRDPFGLEWAFNE 132          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: A0A2V9UEF3_9BACT (Glyoxalase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9UEF3_9BACT)

HSP 1 Score: 68.6 bits (166), Expect = 2.730e-10
Identity = 44/132 (33.33%), Postives = 66/132 (50.00%), Query Frame = 0
Query:   30 IEDVPKELARKIIPFVSVRDCSAYMTFLTDALGAEVLYPPAKDPTGKIMCAEMKINGGIIMLGDHC----SKDASKVEASMTISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDPFGQPWGL 157
            ++ VP E    + PF++V+DC+  + F   A GA+     AKDP+GK+M AE+KI   I+M+ D      +     V  S    H    D      ++ K  G ++   V  QFWG  +G+ KDPFG  W +
Sbjct:    3 VKPVP-ECYHTLTPFMTVKDCTRAIEFYQQAFGAQAR-GVAKDPSGKVMHAEIKIGDSIVMMADEFPDFGALSPESVGGSSMGLHIYVPDVDAAFDRAVKA-GAKVEMPVMDQFWGDRYGKLKDPFGHKWSI 131          
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Match: UPI00167AAFB5 (VOC family protein n=1 Tax=Gemmobacter tilapiae TaxID=875041 RepID=UPI00167AAFB5)

HSP 1 Score: 67.0 bits (162), Expect = 6.160e-10
Identity = 38/129 (29.46%), Postives = 65/129 (50.39%), Query Frame = 0
Query:   37 LARKIIPFVSVRDCSAYMTFLTDALGAEVLYPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDASKVEASMT--ISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDPFGQPWGLCEVQEG 163
            L + +IP++++      + F   A GAEVL  PA+D +G +M A + INGG++M+ D      ++ E +    ++ ++  D+           G  +      +FWG  +GR +DPFG  W + E  EG
Sbjct:    9 LMQGVIPYLAIDGAQKAIDFYAKAFGAEVLGEPARDESGTLMNASLAINGGVLMVMDTMPNIGAEGEPATDKGLTLQIVTDKGDFWWDRAVAAGCVVTHPFRQEFWGDRYGRVRDPFGLMWAINEPGEG 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17203.5102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNL3_9PHAE2.520e-25794.66AraC_E_bind domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5L888_9PHAE4.340e-24592.13VOC domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LJ97_ECTSI9.670e-18791.27AraC family transcriptional regulator n=1 Tax=Ecto... [more]
D8LJ96_ECTSI7.390e-1797.56Glyoxalase family protein (Partial) (Fragment) n=1... [more]
UPI001556A4032.640e-1434.62VOC family protein n=1 Tax=Pseudoruegeria sp. HB17... [more]
A0A2V7X1W6_9BACT3.290e-1235.51Glyoxalase n=1 Tax=Acidobacteria bacterium TaxID=1... [more]
UPI000F83A0091.500e-1142.50GyrI-like domain-containing protein n=1 Tax=Sulfur... [more]
A0A0F2P6N2_9HYPH9.950e-1130.40VOC domain-containing protein n=1 Tax=Hoeflea sp. ... [more]
A0A2V9UEF3_9BACT2.730e-1033.33Glyoxalase n=1 Tax=Acidobacteria bacterium TaxID=1... [more]
UPI00167AAFB56.160e-1029.46VOC family protein n=1 Tax=Gemmobacter tilapiae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010499Bacterial transcription activator, effector bindingSMARTSM00871AraC_E_bind_2coord: 185..348
e-value: 1.8E-8
score: 44.1
IPR029068Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseGENE3D3.10.180.10coord: 36..162
e-value: 8.7E-13
score: 50.8
IPR029068Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseSUPERFAMILY54593Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenasecoord: 40..177
IPR011256Regulatory factor, effector binding domain superfamilyGENE3D3.20.80.10coord: 181..349
e-value: 2.1E-31
score: 110.8
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 212..348
IPR029442GyrI-like small molecule binding domainPFAMPF06445GyrI-likecoord: 216..347
e-value: 3.6E-15
score: 56.6
NoneNo IPR availablePANTHERPTHR34109FAMILY NOT NAMEDcoord: 39..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17203contigEcto-sp13_S_contig17203:26..3616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17203.5102.1mRNA_Ecto-sp13_S_contig17203.5102.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17203 2..3616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17203.5102.1 ID=prot_Ecto-sp13_S_contig17203.5102.1|Name=mRNA_Ecto-sp13_S_contig17203.5102.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=357bp
MTEQFWGATFGVYQDPFGQIWSVSNSTNTIEDVPKELARKIIPFVSVRDC
SAYMTFLTDALGAEVLYPPAKDPTGKIMCAEMKINGGIIMLGDHCSKDAS
KVEASMTISHEVGKDEAGPLAKSFKDNGGELLEEVSMQFWGQVWGRCKDP
FGQPWGLCEVQEGPAPSNEDMAKDMEIGAKYDWRYTWAVEDMPTVYCYGA
MSTCEATGPAISEKTNKTLPAAFAGAAAAGLAMAGPPTSAYYTWDSSPGG
TTKFTCGPSVAGGGVSALMKDVDGDDNGLGVRTAGGCKCVTTLHTGPYDQ
LMKCYKATFEWVETKGYESRMPVFELYENDPKDTPPEKLKTKVCIPIVAK
GTTPKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010499AraC_E-bd
IPR029068Glyas_Bleomycin-R_OHBP_Dase
IPR011256Reg_factor_effector_dom_sf
IPR029442GyrI-like