prot_Ecto-sp13_S_contig171.5040.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig171.5040.1
Unique Nameprot_Ecto-sp13_S_contig171.5040.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length405
Homology
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: D7FQL1_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQL1_ECTSI)

HSP 1 Score: 780 bits (2015), Expect = 1.130e-284
Identity = 396/398 (99.50%), Postives = 397/398 (99.75%), Query Frame = 0
Query:    7 DEGASAQDKPLTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            DEGA AQDKPLTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDV+AADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI
Sbjct:    7 DEGAPAQDKPLTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVAAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: A0A835YJN5_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN5_9STRA)

HSP 1 Score: 692 bits (1786), Expect = 9.190e-250
Identity = 345/386 (89.38%), Postives = 367/386 (95.08%), Query Frame = 0
Query:   19 DDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            D+ IETNWDE +E+FDAMELREELLRGIYAYGFEKPSAIQQRA+KPILMGKD IAQAQSGTGKTATFA+SILQKIDV   +CQALVLAPTRELAQQIVKVVRA+GD+M +QVHACVGGTAVRDDIRTLQNGVH+VVGTPGRVYDMI+R ALR+  V LF LDEADEMLSRGFKDQIYDVFQ+LPE+VQVALFSATMPL+VL+VTNRFMP PVRILVK+DELTLEGIKQFYIAVD+EEWK DTLCDLYETLTITQAIIYCNTRRRVDWL+EKMQ RDFT+S MHG+MGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T GDVRYLRDIEEFY TQVEEMPMNV DLI
Sbjct:   20 DEVIETNWDEAVESFDAMELREELLRGIYAYGFEKPSAIQQRAIKPILMGKDVIAQAQSGTGKTATFAISILQKIDVGLQECQALVLAPTRELAQQIVKVVRAIGDYMNIQVHACVGGTAVRDDIRTLQNGVHVVVGTPGRVYDMINRRALRMASVKLFTLDEADEMLSRGFKDQIYDVFQFLPEKVQVALFSATMPLEVLDVTNRFMPSPVRILVKRDELTLEGIKQFYIAVDKEEWKFDTLCDLYETLTITQAIIYCNTRRRVDWLTEKMQSRDFTVSSMHGEMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFITAGDVRYLRDIEEFYHTQVEEMPMNVKDLI 405          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: M4B3U9_HYAAE (RNA helicase n=27 Tax=Oomycota TaxID=4762 RepID=M4B3U9_HYAAE)

HSP 1 Score: 673 bits (1736), Expect = 4.730e-242
Identity = 338/401 (84.29%), Postives = 369/401 (92.02%), Query Frame = 0
Query:    4 EKRDEGASAQDKPLTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            E  +EGA  +   L + DIETNWDE IETFD MELRE+LLRGIYAYGFEKPSAIQQRAVKPIL+G DCIAQAQSGTGKTATFAVSILQKI++S  + QAL+LAPTRELAQQIVKVV ALGD+M +QVHACVGGTAVRDDIRTLQ GVHIVVGTPGRV DMI+R ALR D V +FVLDEADEMLSRGFKDQIY+VF++LPE+VQVALFSATMPLDVLEVT+RFM EP+RILVK+DELTLEGIKQF+IA+DREEWK DTLCDLYETLTITQAIIYCNTRR+VDWL+EKMQ +DFT+S MHGDM Q ERD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  DVRYLRDIE+FY TQ++EMPMNVADLI
Sbjct:   11 ENAEEGAPDEQVQLEEGDIETNWDEVIETFDGMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAVSILQKINISLKETQALILAPTRELAQQIVKVVVALGDYMTVQVHACVGGTAVRDDIRTLQQGVHIVVGTPGRVGDMINRRALRTDEVKMFVLDEADEMLSRGFKDQIYEVFRFLPEKVQVALFSATMPLDVLEVTHRFMREPIRILVKRDELTLEGIKQFFIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTHNDVRYLRDIEQFYNTQIDEMPMNVADLI 411          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: A0A8J2SPN6_9STRA (RNA helicase n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A8J2SPN6_9STRA)

HSP 1 Score: 665 bits (1716), Expect = 3.770e-239
Identity = 326/389 (83.80%), Postives = 364/389 (93.57%), Query Frame = 0
Query:   16 PLTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            P+ D++I+TNWDE IETFD MELREELLRGIYAYGFEKPSAIQQRA+KP+LMG+D IAQAQSGTGKTATF++ ILQ++D   A+CQALVLAPTRELAQQIVKV+ ALGDFM +++HACVGGTAVRDDIRTLQNGVH+VVGTPGRVYDMI+R ALRL    +F LDEADEMLSRGFKDQIYDVF++LPE+V+VALFSATMPL+VLE+T+RFM EP+RILVKKDELTLEGIKQFYIAV+REEWKLDTLCDLYETLTITQAIIYCNTRR+VDWL++ M ++DFT+S MHGDM Q ERD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T GDVRY+RDIE FY TQ+EEMPMNVADLI
Sbjct:   14 PVKDEEIDTNWDEAIETFDNMELREELLRGIYAYGFEKPSAIQQRAIKPMLMGRDVIAQAQSGTGKTATFSIGILQQVDNGLAECQALVLAPTRELAQQIVKVMIALGDFMSVRIHACVGGTAVRDDIRTLQNGVHVVVGTPGRVYDMINRRALRLADTKIFALDEADEMLSRGFKDQIYDVFKFLPEQVRVALFSATMPLEVLEITSRFMQEPIRILVKKDELTLEGIKQFYIAVEREEWKLDTLCDLYETLTITQAIIYCNTRRKVDWLTDNMTQKDFTVSAMHGDMDQKERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTSGDVRYMRDIEAFYNTQIEEMPMNVADLI 402          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: G4YJL5_PHYSP (RNA helicase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJL5_PHYSP)

HSP 1 Score: 669 bits (1727), Expect = 3.990e-238
Identity = 333/388 (85.82%), Postives = 362/388 (93.30%), Query Frame = 0
Query:   17 LTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            L + DIETNWDE IETFD MELRE+LLRGIYAYGFEKPSAIQQRAVKPIL+G DCIAQAQSGTGKTATFAVSILQKID++  + QAL+LAPTRELAQQIVKVV A+GD+M +QVHACVGGTAVRDDIRTLQ GVHIVVGTPGRV DMI+R ALR D V +FVLDEADEMLSRGFKDQIY+VF++LPE+VQVALFSATMPLDVLEVT RFM EP+RILVK+DELTLEGIKQF+IA+DREEWK DTLCDLYETLTITQAIIYCNTRR+VDWL+EKMQ +DFT+S MHGDM Q ERD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  DVRYLRDIE+FY TQ++EMPMNVADLI
Sbjct:  186 LNEGDIETNWDEVIETFDGMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAVSILQKIDINLKETQALILAPTRELAQQIVKVVVAIGDYMSVQVHACVGGTAVRDDIRTLQQGVHIVVGTPGRVGDMINRRALRTDEVKMFVLDEADEMLSRGFKDQIYEVFRFLPEKVQVALFSATMPLDVLEVTRRFMREPIRILVKRDELTLEGIKQFFIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTEKMQSKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTHNDVRYLRDIEQFYNTQIDEMPMNVADLI 573          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: A0A7S2GXP2_9STRA (RNA helicase n=7 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2GXP2_9STRA)

HSP 1 Score: 662 bits (1709), Expect = 6.350e-238
Identity = 327/388 (84.28%), Postives = 359/388 (92.53%), Query Frame = 0
Query:   17 LTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            LTD DI++NW+E +E+FDAMEL EELLRGIYAYGFEKPSAIQQRA+KP ++G+D IAQAQSGTGKTATFA+  L K+D    DCQ+L+LAPTRELAQQI KVV ALGD+M++ VHACVGGTAVRDDIRTLQ GVHIVVGTPGRVYDMI+R ALRLD +  F LDEADEMLSRGFKDQIYD+F++LPE VQV LFSATMPLDVLEVT RFM EPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRR+VDWL E+MQ+RDFT+SCMHGDM Q ERD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTNRENYIHRIGRSGRFGRKGVAINF+T+GDVRYLRDIE+FYTT++ EMPMNVADLI
Sbjct:   25 LTDADIDSNWNEALESFDAMELPEELLRGIYAYGFEKPSAIQQRAIKPTILGRDLIAQAQSGTGKTATFAIGTLAKLDTKLRDCQSLILAPTRELAQQIQKVVDALGDYMEVSVHACVGGTAVRDDIRTLQAGVHIVVGTPGRVYDMINRRALRLDSIRQFFLDEADEMLSRGFKDQIYDIFKFLPETVQVCLFSATMPLDVLEVTQRFMREPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRKVDWLREEMQQRDFTVSCMHGDMDQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTNRENYIHRIGRSGRFGRKGVAINFLTEGDVRYLRDIEQFYTTEITEMPMNVADLI 412          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: A0A7S0BWH4_9STRA (RNA helicase n=3 Tax=Sar TaxID=2698737 RepID=A0A7S0BWH4_9STRA)

HSP 1 Score: 661 bits (1706), Expect = 1.820e-237
Identity = 328/403 (81.39%), Postives = 364/403 (90.32%), Query Frame = 0
Query:    2 AEEKRDEGASAQDKPLTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            A +KR+ G       LT+DDI++NWDE IETFD ME+ EELLRGIYAYGFEKPSAIQQRA+KP+++G+D IAQAQSGTGKTATFA+  L KID    +CQAL+LAPTRELAQQI KVV ALGD+M L+VHACVGGTAVRDDIRTLQ GVH+VVGTPGRVYDMI+R ALRLD +  F+LDEADEMLSRGFKDQIYD+F++LPE+VQV LFSATMPL+VLEVT  FM +PVRILVKKDELTLEGIKQFYIAVD+EEWKL+TLCDLYETLTITQAIIYCNTRR+VDWL E MQ RDFT+SCMHGDM Q ERD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTNRENYIHRIGRSGRFGRKGVAINF+T GDVRYLRDIE+FYTT++ EMPMNVADLI
Sbjct:   10 AVDKREGGEGESPGGLTEDDIDSNWDEAIETFDGMEIPEELLRGIYAYGFEKPSAIQQRAIKPVMLGRDLIAQAQSGTGKTATFAIGTLAKIDAKLRECQALILAPTRELAQQIQKVVIALGDYMSLEVHACVGGTAVRDDIRTLQAGVHVVVGTPGRVYDMINRRALRLDSIRQFMLDEADEMLSRGFKDQIYDIFKFLPEQVQVCLFSATMPLEVLEVTANFMRDPVRILVKKDELTLEGIKQFYIAVDKEEWKLETLCDLYETLTITQAIIYCNTRRKVDWLQENMQNRDFTVSCMHGDMDQRERDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTNRENYIHRIGRSGRFGRKGVAINFLTDGDVRYLRDIEQFYTTEITEMPMNVADLI 412          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: W4H0V1_9STRA (RNA helicase n=8 Tax=Saprolegniaceae TaxID=4764 RepID=W4H0V1_9STRA)

HSP 1 Score: 657 bits (1695), Expect = 7.150e-236
Identity = 327/390 (83.85%), Postives = 358/390 (91.79%), Query Frame = 0
Query:   15 KPLTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            +P+ D DI+TNWDE IE+FD MELRE+LLRGIYAYGFEKPSAIQQRAVKPIL+G DCIAQAQSGTGKTATFA+SILQKID +  + QAL+LAPTRELA QIVKVV ALGD+    VHACVGGTAVRDDIRTLQ+GVHIVVGTPGRV DMI+R A R D V LFVLDEADEMLSRGFKDQIYDVF++LPE+VQVALFSATMPLDVLEVT RFM +P+RILVK+DELTLEGIKQFYIA+DREEWK DTLCDLYETLTITQAIIYCNTRR+VDWL+E+MQ +DFT+S MHGDM Q ERD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINF+T  D RYLRDIE+FY TQ++EMPM+VADLI
Sbjct:   18 QPILDGDIDTNWDEVIESFDGMELREDLLRGIYAYGFEKPSAIQQRAVKPILLGHDCIAQAQSGTGKTATFAISILQKIDPALRETQALILAPTRELALQIVKVVMALGDYTGTSVHACVGGTAVRDDIRTLQSGVHIVVGTPGRVGDMINRRAFRTDNVKLFVLDEADEMLSRGFKDQIYDVFRFLPEKVQVALFSATMPLDVLEVTQRFMRDPIRILVKRDELTLEGIKQFYIAIDREEWKFDTLCDLYETLTITQAIIYCNTRRKVDWLTERMQAKDFTVSAMHGDMEQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFLTAADARYLRDIEQFYNTQIDEMPMDVADLI 407          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: A0A6V2BQP0_9STRA (RNA helicase n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A6V2BQP0_9STRA)

HSP 1 Score: 655 bits (1690), Expect = 5.150e-235
Identity = 325/397 (81.86%), Postives = 360/397 (90.68%), Query Frame = 0
Query:    8 EGASAQDKPLTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            EG       LTD DI++NW+E +E+FDAMEL EELLRGIYAYGFEKPSAIQQRA+KP ++G+D IAQAQSGTGKTATFA+  L K+D    +CQ+L+LAPTRELAQQI KVV AL D+M + VHACVGGTAVRDDIRTLQ GVHIVVGTPGRVYDMI+R ALRLD +  F+LDEADEMLSRGFKDQIYD+F++LPE VQV LFSATMPLDVLEVT RFM EPVRILVKKDELTLEGIKQFYIAV+REEWKLDTLCDLYETLTITQAIIYCNTRR+VDWL ++MQ+RDFT+SCMHGDM Q ERD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTNRENYIHRIGRSGRFGRKGVAINF+T+GDVRYLRDIE+FYTT++ EMPMNVADLI
Sbjct:   17 EGGEEAPGGLTDADIDSNWNETLESFDAMELPEELLRGIYAYGFEKPSAIQQRAIKPTILGRDLIAQAQSGTGKTATFAIGTLGKLDCKLRECQSLILAPTRELAQQIQKVVDALSDYMDVSVHACVGGTAVRDDIRTLQAGVHIVVGTPGRVYDMINRRALRLDSIRQFMLDEADEMLSRGFKDQIYDIFKFLPESVQVCLFSATMPLDVLEVTQRFMREPVRILVKKDELTLEGIKQFYIAVEREEWKLDTLCDLYETLTITQAIIYCNTRRKVDWLRDEMQQRDFTVSCMHGDMDQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTNRENYIHRIGRSGRFGRKGVAINFLTEGDVRYLRDIEQFYTTEITEMPMNVADLI 413          
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Match: A0A7S1DY22_9STRA (RNA helicase n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1DY22_9STRA)

HSP 1 Score: 651 bits (1679), Expect = 1.000e-233
Identity = 321/388 (82.73%), Postives = 356/388 (91.75%), Query Frame = 0
Query:   17 LTDDDIETNWDECIETFDAMELREELLRGIYAYGFEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADCQALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGVHIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQYLPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIAVDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCMHGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNVADLI 404
            LTD DI++NWDE +ETFD +EL EELLRGIYAYGFEKPSAIQQRA+KP ++G+D IAQAQSGTGKTATFA+  L  +D    +CQ+L+LAPTRELAQQI KVV ALGD+M + VHACVGGTAVRDDIRTL +GVHIVVGTPGRV+DMISR ALRLD +  F LDEADEMLSRGFKDQIYD+F++LPE VQV LFSATMPLDVLEVT RFM EPVRILVKKDELTLEGIKQFYIAV+REEWKL+TLCDLYETLTITQAIIYCNTRR+VDWL E+MQ+RDFT+SCMHGDM Q ERD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTNRENYIHRIGRSGRFGRKGVAINF+T+GDVRYLRDIE+FYTT++ EMPM+VADLI
Sbjct:    2 LTDADIDSNWDETVETFDGLELPEELLRGIYAYGFEKPSAIQQRAIKPTMLGRDLIAQAQSGTGKTATFAIGTLSTLDNKLKECQSLILAPTRELAQQIQKVVIALGDYMSVLVHACVGGTAVRDDIRTLMDGVHIVVGTPGRVFDMISRRALRLDSIKQFFLDEADEMLSRGFKDQIYDIFKFLPETVQVCLFSATMPLDVLEVTQRFMREPVRILVKKDELTLEGIKQFYIAVEREEWKLETLCDLYETLTITQAIIYCNTRRKVDWLQEEMQKRDFTVSCMHGDMDQRERDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTNRENYIHRIGRSGRFGRKGVAINFLTEGDVRYLRDIEQFYTTEISEMPMDVADLI 389          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig171.5040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQL1_ECTSI1.130e-28499.50RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A835YJN5_9STRA9.190e-25089.38RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
M4B3U9_HYAAE4.730e-24284.29RNA helicase n=27 Tax=Oomycota TaxID=4762 RepID=M4... [more]
A0A8J2SPN6_9STRA3.770e-23983.80RNA helicase n=2 Tax=Pelagomonadales TaxID=54409 R... [more]
G4YJL5_PHYSP3.990e-23885.82RNA helicase n=1 Tax=Phytophthora sojae (strain P6... [more]
A0A7S2GXP2_9STRA6.350e-23884.28RNA helicase n=7 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A7S0BWH4_9STRA1.820e-23781.39RNA helicase n=3 Tax=Sar TaxID=2698737 RepID=A0A7S... [more]
W4H0V1_9STRA7.150e-23683.85RNA helicase n=8 Tax=Saprolegniaceae TaxID=4764 Re... [more]
A0A6V2BQP0_9STRA5.150e-23581.86RNA helicase n=4 Tax=Bacillariophyta TaxID=2836 Re... [more]
A0A7S1DY22_9STRA1.000e-23382.73RNA helicase n=4 Tax=Bacillariophyta TaxID=2836 Re... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 50..247
e-value: 4.6E-61
score: 218.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 62..232
score: 31.0
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 284..365
e-value: 5.2E-34
score: 129.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 257..365
e-value: 9.4E-31
score: 106.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 243..404
score: 26.906
NoneNo IPR availableGENE3D3.40.50.300coord: 19..239
e-value: 6.4E-71
score: 239.9
NoneNo IPR availableGENE3D3.40.50.300coord: 240..404
e-value: 4.2E-61
score: 207.0
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 15..395
NoneNo IPR availablePANTHERPTHR24031:SF698coord: 15..395
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 56..218
e-value: 2.7E-47
score: 160.8
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 178..186
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 31..59
score: 9.889
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 100..386

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig171contigEcto-sp13_S_contig171:3422..10690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig171.5040.1mRNA_Ecto-sp13_S_contig171.5040.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig171 2482..10734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig171.5040.1 ID=prot_Ecto-sp13_S_contig171.5040.1|Name=mRNA_Ecto-sp13_S_contig171.5040.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=405bp
MAEEKRDEGASAQDKPLTDDDIETNWDECIETFDAMELREELLRGIYAYG
FEKPSAIQQRAVKPILMGKDCIAQAQSGTGKTATFAVSILQKIDVSAADC
QALVLAPTRELAQQIVKVVRALGDFMQLQVHACVGGTAVRDDIRTLQNGV
HIVVGTPGRVYDMISRGALRLDRVGLFVLDEADEMLSRGFKDQIYDVFQY
LPERVQVALFSATMPLDVLEVTNRFMPEPVRILVKKDELTLEGIKQFYIA
VDREEWKLDTLCDLYETLTITQAIIYCNTRRRVDWLSEKMQERDFTISCM
HGDMGQGERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTN
RENYIHRIGRSGRFGRKGVAINFVTQGDVRYLRDIEEFYTTQVEEMPMNV
ADLI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif
IPR027417P-loop_NTPase