prot_Ecto-sp13_S_contig17078.5031.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17078.5031.1
Unique Nameprot_Ecto-sp13_S_contig17078.5031.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length173
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17078.5031.1 vs. uniprot
Match: D7G2I8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2I8_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 3.470e-99
Identity = 153/160 (95.62%), Postives = 155/160 (96.88%), Query Frame = 0 
Query:   13 MEGVNPREDADFEMTVDWDEELRKLNASQYGKRQERDLTKDMNDPEAVKWARKNAKIAQSAMENSTKQVRGAMRKAPRWQTLSRDYRFWLGLVVALSLVSSVISASGRSHDLVVWNDGLGSEAFGEAFFAHAALLAATTAHSAGDAAAQLADTGAAMVFA 172
            MEGVNPREDADFEMTVDWDEELRKLNASQYGKRQERDLTKDMNDPEAVKWARKNAKIAQSAME+ TKQVRGAMRKAPRWQTLSRDYRFWLGLVVALSLVSSVISASGRSHDLVVWND LGSE FGEA FAHAALLAATTAHSAGDAA QLA+TGAAMVFA
Sbjct:    1 MEGVNPREDADFEMTVDWDEELRKLNASQYGKRQERDLTKDMNDPEAVKWARKNAKIAQSAMEDRTKQVRGAMRKAPRWQTLSRDYRFWLGLVVALSLVSSVISASGRSHDLVVWNDVLGSEPFGEALFAHAALLAATTAHSAGDAATQLAETGAAMVFA 160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17078.5031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G2I8_ECTSI3.470e-9995.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..172
NoneNo IPR availableTMHMMTMhelixcoord: 100..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17078contigEcto-sp13_S_contig17078:639..3759 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17078.5031.1mRNA_Ecto-sp13_S_contig17078.5031.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17078 639..3759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17078.5031.1 ID=prot_Ecto-sp13_S_contig17078.5031.1|Name=mRNA_Ecto-sp13_S_contig17078.5031.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp
GRSAPGHRRSLSMEGVNPREDADFEMTVDWDEELRKLNASQYGKRQERDL
TKDMNDPEAVKWARKNAKIAQSAMENSTKQVRGAMRKAPRWQTLSRDYRF
WLGLVVALSLVSSVISASGRSHDLVVWNDGLGSEAFGEAFFAHAALLAAT
TAHSAGDAAAQLADTGAAMVFA*
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