prot_Ecto-sp13_S_contig17046.5015.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17046.5015.1
Unique Nameprot_Ecto-sp13_S_contig17046.5015.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length134
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17046.5015.1 vs. uniprot
Match: D7FLB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB3_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.600e-11
Identity = 38/53 (71.70%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 MAMSHVPAHIRQAHGGHPTRGRRSSRAGQKAQVS---GTRQNWCYQAVTTTLP 50
            MAMSHVPAHIRQAHGGHPTRGR SSRAG+KAQ S   GT  +     VTT LP
Sbjct:    1 MAMSHVPAHIRQAHGGHPTRGRGSSRAGKKAQGSINGGTISDLQKAGVTTLLP 53
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BLAST of mRNA_Ecto-sp13_S_contig17046.5015.1 vs. uniprot
Match: D7FU68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU68_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 4.960e-11
Identity = 38/53 (71.70%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 MAMSHVPAHIRQAHGGHPTRGRRSSRAGQKAQVS---GTRQNWCYQAVTTTLP 50
            MAMSHVPAHIRQAHGGHPTRGR SSRAG+KAQ S   GT  +     VTT LP
Sbjct:    1 MAMSHVPAHIRQAHGGHPTRGRGSSRAGKKAQGSINGGTISDLQKAGVTTLLP 53
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BLAST of mRNA_Ecto-sp13_S_contig17046.5015.1 vs. uniprot
Match: A0A6H5K6M3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M3_9PHAE)

HSP 1 Score: 53.5 bits (127), Expect = 1.400e-5
Identity = 28/39 (71.79%), Postives = 30/39 (76.92%), Query Frame = 0 
Query:   81 EGSEDGDDADEGEQRAPVVTEEPGLLAGVGLDSFLHATE 119
            EGSED DDA EGEQ AP  TE+   LAGV LD+FLHATE
Sbjct:  955 EGSEDEDDAGEGEQSAPATTEDAEGLAGVDLDAFLHATE 993
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17046.5015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLB3_ECTSI2.600e-1171.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU68_ECTSI4.960e-1171.70Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5K6M3_9PHAE1.400e-571.79Reverse transcriptase Ty1/copia-type domain-contai... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17046contigEcto-sp13_S_contig17046:96..1415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17046.5015.1mRNA_Ecto-sp13_S_contig17046.5015.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17046 96..3417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17046.5015.1 ID=prot_Ecto-sp13_S_contig17046.5015.1|Name=mRNA_Ecto-sp13_S_contig17046.5015.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=134bp
MAMSHVPAHIRQAHGGHPTRGRRSSRAGQKAQVSGTRQNWCYQAVTTTLP
SDDNGSAPGIRAQGTTDARAQGTTDAPGSEEGSEDGDDADEGEQRAPVVT
EEPGLLAGVGLDSFLHATEKWAWQDIVLLRGRW*
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