prot_Ecto-sp13_S_contig17037.5011.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17037.5011.1
Unique Nameprot_Ecto-sp13_S_contig17037.5011.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length158
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17037.5011.1 vs. uniprot
Match: A0A6H5KSK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSK8_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 6.250e-42
Identity = 87/128 (67.97%), Postives = 101/128 (78.91%), Query Frame = 0 
Query:    1 MELLQSLYSQQDEHQRLVDQLKSLSLFWDKQQKWNQYASKNRHLKEMVRQVQMKHEKQSEQRRIQKLMMQHXXXXXXXXXXXXXXXXXXXXXXXXXXHRQEWKGVMDDLNSHQAAVHTHLSGRIVTKE 128
            MELLQSLYSQQDEHQR+VDQL+SLSLFW+KQQKWNQYA+KN+ LKEMVR+VQMKH+ Q+EQ RIQK M+QH  XXXXXX                  HR EW+G+M+DL SHQAAVHT+LSGRIV +E
Sbjct:  212 MELLQSLYSQQDEHQRVVDQLQSLSLFWEKQQKWNQYANKNKQLKEMVRRVQMKHDTQNEQWRIQKPMIQHEHXXXXXXRRKEQLVEARAVRQQLDAHRHEWEGIMEDLESHQAAVHTNLSGRIVIRE 339
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BLAST of mRNA_Ecto-sp13_S_contig17037.5011.1 vs. uniprot
Match: Q8QN63_ESV1K (EsV-1-227 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN63_ESV1K)

HSP 1 Score: 144 bits (364), Expect = 9.580e-41
Identity = 88/160 (55.00%), Postives = 105/160 (65.62%), Query Frame = 0 
Query:    1 MELLQSLYSQQDEHQRLVDQLKSLSLFWDKQQKWNQYASKNRHLKEMVRQVQMKHEKQSEQRRIQKLMMQHXXXXXXXXXXXXXXXXXXXXXXXXXXHRQEWKGVMDDLNSHQAAVHTHLSGRIVTK-EGEQRQCDQNKEVLMRLIRTLQQRTHQT-QVC 158
            MELL+SL SQ + HQR+VDQL SL  FWDKQQKWNQ A KN+ L+E + Q+QMKH+KQ E+RRIQKL+MQH                          HRQEW+   DDL +HQAAVHTHLSGRIVTK + EQRQ D+NK VL  ++  L +R  Q  QVC
Sbjct:   44 MELLESLCSQLNGHQRVVDQLDSLHHFWDKQQKWNQSAQKNKCLREKILQLQMKHKKQDEERRIQKLIMQHECEVREQICRKEQSMEMQAVQKEMTDHRQEWQIAKDDLEAHQAAVHTHLSGRIVTKNDEEQRQRDKNKSVLKMIMHELTRRRQQKEQVC 203
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17037.5011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSK8_9PHAE6.250e-4267.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q8QN63_ESV1K9.580e-4155.00EsV-1-227 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17037contigEcto-sp13_S_contig17037:42..515 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17037.5011.1mRNA_Ecto-sp13_S_contig17037.5011.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17037 15..515 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17037.5011.1 ID=prot_Ecto-sp13_S_contig17037.5011.1|Name=mRNA_Ecto-sp13_S_contig17037.5011.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=158bp
MELLQSLYSQQDEHQRLVDQLKSLSLFWDKQQKWNQYASKNRHLKEMVRQ
VQMKHEKQSEQRRIQKLMMQHQYEMEEEQRRKEHVMEMQKVQQQLDKHRQ
EWKGVMDDLNSHQAAVHTHLSGRIVTKEGEQRQCDQNKEVLMRLIRTLQQ
RTHQTQVC
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