prot_Ecto-sp13_S_contig17010.5001.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17010.5001.1
Unique Nameprot_Ecto-sp13_S_contig17010.5001.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length816
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17010.5001.1 vs. uniprot
Match: D8LII7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LII7_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.380e-13
Identity = 43/46 (93.48%), Postives = 44/46 (95.65%), Query Frame = 0 
Query:  767 KINEQPTISCAALGARLVQLRRGLGKARAKQLALAACRFPDKQVGL 812
            +INEQPTISCAALGARLVQLR GLGKARAKQLALAACRFPDKQV L
Sbjct:   37 QINEQPTISCAALGARLVQLRPGLGKARAKQLALAACRFPDKQVYL 82
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17010.5001.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LII7_ECTSI1.380e-1393.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040673CCDC81, HU domain 2PFAMPF18289HU-CCDC81_euk_2coord: 121..189
e-value: 6.4E-7
score: 29.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17010contigEcto-sp13_S_contig17010:110..2931 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17010.5001.1mRNA_Ecto-sp13_S_contig17010.5001.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17010 110..2931 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17010.5001.1 ID=prot_Ecto-sp13_S_contig17010.5001.1|Name=mRNA_Ecto-sp13_S_contig17010.5001.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=816bp
MVPPAPRENPALSKAILRSAARRIQLAARDGDGDGLTSRKKEEEERWCHI
VNKIWRAIGLTIEHSLLSAARGVRIESFGTFSLNALGRPRFFLSADFAAR
HRLLKYDVCSGGCLAGGSVNTRLNVARVAATAGSPRPETERAVNAILRSL
HQRLSTGRSVMLSFHPVAEFSCTPSGQATMRFLSRFRTKQKKMAGDATHV
RVGTAKASPLTTPWASAAAAAVAHGNPHGNVRGTSSAGCKHIAAAEPETG
RALQDFVGRKGDSVGRRPRSSNSTGSVQPENVIKAAGRPDTSIGFDDRRR
PSLTPSSNAASSTNRKATSISSSVQRSAVMEAEVKAANDTPASFGGSHTH
NNTRFLTAQGIPYPSSSILRDGQQGCHHGSDKGSSRGPSDVADEIEHCVQ
DEIRDLSAAHQLANLCNSKSRVGLAEHRQEQPRHHPEEQLSSLLRRQTLA
QAGEEGLRRLFETLRLTHVTDDRRRKDGGVVGRLSSRDLLLALRDVGTTL
TSAELAETTKLFRQQPDDRVSLPVVLAGIRIENCGRQWRQQAAAADVISE
EDTQPSSSVLGTKKVDTARELPVEASPKRFPSGLPWENFEHEVELSKSCF
PRAGWASNSEKGNSTALLSTPRLSDSSTVCELLQRKTVAVEGRARRNAGR
PQSQNAERIFDGIQLHRAPPGEGGDQSDGGCDKRANKVVVDSSAELLVGQ
DPDSDPSAVQQQARRQCWGDDNIGGERAAVAAASTAAPEDDIADLARIVF
NPPCSLEGLIRILEANKINEQPTISCAALGARLVQLRRGLGKARAKQLAL
AACRFPDKQVGLYIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040673CCDC81_HU_dom_2