prot_Ecto-sp13_S_contig1701.4999.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1701.4999.1
Unique Nameprot_Ecto-sp13_S_contig1701.4999.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length352
Homology
BLAST of mRNA_Ecto-sp13_S_contig1701.4999.1 vs. uniprot
Match: A0A6H5L5Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y8_9PHAE)

HSP 1 Score: 640 bits (1652), Expect = 8.200e-223
Identity = 324/351 (92.31%), Postives = 328/351 (93.45%), Query Frame = 0
Query:    1 MPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAVSAMFGMFQGWTPDSTVGDTHWHAMVKLHVSEEASWVHEFVDDSLERFREKATEAAAAAEQADPGGEGGDEELSDVGGRNPAATEFMCAHVRRQDFKESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEHDFRDTVDVLLRRAPAKLDVSPQFVFATSDDARFLEDIKVGNAVPVFTLDDVSRAAAAARGGGKEGAAAAGVGGEGSGNPAEASAATAGGKAVTPEEVEAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTRWSRFCDWFLRKWRRIRNFFH 351
            MPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLA+SAMFGMFQGWTPDSTVGDTHWHAMVKLHVSEEASWVHEFVDDSLERFREKATEAAAAAEQAD GGEGGDEELSDVGGRNPAA EFMCAHVRRQDF+ESCSCYEEEYRTGSARDWVKEALDGGGVCWVEE DFRDTVDVLLR APAKLDVSPQFVFATSDDARFLEDIKVGNAVPVFTLDDVSR AAA           AG G  G   PAE+SAATAGGKAVTPEEV+AALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTRWSRFC WFLRKWRRIRNFFH
Sbjct:  561 MPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAISAMFGMFQGWTPDSTVGDTHWHAMVKLHVSEEASWVHEFVDDSLERFREKATEAAAAAEQADSGGEGGDEELSDVGGRNPAAAEFMCAHVRRQDFEESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEQDFRDTVDVLLRWAPAKLDVSPQFVFATSDDARFLEDIKVGNAVPVFTLDDVSRVAAAXXXXXXXXXXXAGEGFRG---PAESSAATAGGKAVTPEEVQAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTRWSRFCGWFLRKWRRIRNFFH 908          
BLAST of mRNA_Ecto-sp13_S_contig1701.4999.1 vs. uniprot
Match: D8LE24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE24_ECTSI)

HSP 1 Score: 601 bits (1549), Expect = 2.320e-207
Identity = 316/387 (81.65%), Postives = 320/387 (82.69%), Query Frame = 0
Query:    1 MPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAVSAMFGMFQGWTPD----------------------------------STVGDTHWHAMVKLHVSEEASWVHEFVDDSLERFREKATEAAAAAEQADPGGEGGDEELSDVGGRNPAATEFMCAHVRRQDFKESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEHDFRDTVDVLLRRAPAKLDVSPQFVFATSDDARFLEDIKVGNAVPVFTLDDVSRAAAAARGGGKEGAAA--AGVGGEGSGNPAEASAATAGGKAVTPEEVEAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTRWSRFCDWFLRKWRRIRNFFH 351
            MPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAVSAMFGMFQ                                       STVGDTHWHAMVKLHVSEEASWVHEFVD SLERFREKATEAAAAAEQADPGGEGGDEELSD GGRNPAA EFMCAHVRRQDFKESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEH+FRDTVDVLLRRAPAKLDVSPQFVFATSDDARFLED+KVGNAVPVFTL+DVSRAAAAARGGG+EGAAA                        AVTPEEVEAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALST WSRFCDWFLRKWRRIRNFFH
Sbjct:  514 MPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAVSAMFGMFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTVGDTHWHAMVKLHVSEEASWVHEFVDGSLERFREKATEAAAAAEQADPGGEGGDEELSDAGGRNPAAAEFMCAHVRRQDFKESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEHNFRDTVDVLLRRAPAKLDVSPQFVFATSDDARFLEDVKVGNAVPVFTLEDVSRAAAAARGGGEEGAAAXXGXXXXXXXXXXXXXXXXXXXXXAVTPEEVEAALPAIDVAVCSRGTLLMLNYFSTYSALIKTKAKAQPNFKRGLYWADPPALSTGWSRFCDWFLRKWRRIRNFFH 900          
BLAST of mRNA_Ecto-sp13_S_contig1701.4999.1 vs. uniprot
Match: A0A7S3WST7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WST7_9SPIT)

HSP 1 Score: 62.8 bits (151), Expect = 1.100e-7
Identity = 53/187 (28.34%), Postives = 84/187 (44.92%), Query Frame = 0
Query:  123 DVGGRNPAATEFMCAHVRRQDFKESCSCYEEEYRTGSARDWVKEALDGGGVCWVEEHDFRDTVDVLLRRAPAKLDVSPQFVFATSDDARFLEDIKVGNAVPVFTLDDVSRAAAAARGGGKEGAAAAGVGGEGSGNPAEASAATAGGKAVTPE-EVE-AALPAI-DVAVCSRGTLLMLNYFSTYSALI 306
            D      ++    C HVRR DF ESC  YEEE R+G AR WV    + G  CW  + +    +++ L RA A  + +    + +SD+ +      +        +  + R A                      +  +   +T GG  ++ + EV+ +AL AI D  VCSR + L+LN FST+S ++
Sbjct:    5 DASAEGASSVRLACVHVRRGDFHESCMHYEEEARSGRARQWVVSHFERGFSCWQTDAELE--LNLQLVRANAAANGNVLAFYGSSDEPKVFTSASLHQ----INVSKLQRWA----------------------SRIQQLESTVGGVIISSQGEVQKSALGAIIDQLVCSRASYLLLNIFSTFSQMV 163          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1701.4999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L5Y8_9PHAE8.200e-22392.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE24_ECTSI2.320e-20781.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3WST7_9SPIT1.100e-728.34Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1701contigEcto-sp13_S_contig1701:1237..5157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1701.4999.1mRNA_Ecto-sp13_S_contig1701.4999.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1701 330..5921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1701.4999.1 ID=prot_Ecto-sp13_S_contig1701.4999.1|Name=mRNA_Ecto-sp13_S_contig1701.4999.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=352bp
MPIKQLAGNDEYFGRMGWGELPKVPLPLANATEAGWSELQQMEDQVLAVS
AMFGMFQGWTPDSTVGDTHWHAMVKLHVSEEASWVHEFVDDSLERFREKA
TEAAAAAEQADPGGEGGDEELSDVGGRNPAATEFMCAHVRRQDFKESCSC
YEEEYRTGSARDWVKEALDGGGVCWVEEHDFRDTVDVLLRRAPAKLDVSP
QFVFATSDDARFLEDIKVGNAVPVFTLDDVSRAAAAARGGGKEGAAAAGV
GGEGSGNPAEASAATAGGKAVTPEEVEAALPAIDVAVCSRGTLLMLNYFS
TYSALIKTKAKAQPNFKRGLYWADPPALSTRWSRFCDWFLRKWRRIRNFF
H*
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