prot_Ecto-sp13_S_contig17005.4997.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17005.4997.1
Unique Nameprot_Ecto-sp13_S_contig17005.4997.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length310
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17005.4997.1 vs. uniprot
Match: A0A6H5JEG7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEG7_9PHAE)

HSP 1 Score: 414 bits (1064), Expect = 1.360e-128
Identity = 263/315 (83.49%), Postives = 272/315 (86.35%), Query Frame = 0 
Query:    1 MVPSTQPTMQVAGWQQPASQHVVTSVVATAGAAASNPSPTTAEGGNSGLAAEAAPFIPAGAMGVGSPAMWGMAGPQLQQQPTGVGAPSPGAASVNAINPTMLTPPTMGGQGVSFGASAVPHGRPTPSPARFATQRGLQQVQXXXXXXXXXXXXXXXXXXXXX------WLIAGAGGMVSAQSNHPRPPRGAQVSGPRSSQGSPSGGWGAASKVHSVAVRGTAVPTSTSSRRPTGTAVHGRGSPGRQGNRGGTSGGGTAAQNVGSSTAAAGKRAKKTNSQALYVPKRSTPRGPGPGSNAQPNSGSASVAAVPAAGS 309
            MVPSTQPTMQVA WQQPASQH+VTSVVATA +AASNP  + AEGGNSGLAAEAAPFIPAGAMGVGSPAMWGMAGPQ QQQPTGVGAPSPGAASVNAINPTMLT PTMGGQGVSFGASAVP GRPTPSPARFATQ+GLQQVQXXXXXXXXXXXXXXXXXXXXX      WLIAG GGMV AQS+HPRPPRGAQ+SGPR SQGSPSGGWGAA K HS+AVRGTAVP+S SSRRPTGTAVHGRGSPGRQGN                     GKRAKKTNSQALYVPKRSTPRGPG  SNAQPN+GSASVAAVPAAGS
Sbjct: 2517 MVPSTQPTMQVARWQQPASQHIVTSVVATAASAASNPPLSMAEGGNSGLAAEAAPFIPAGAMGVGSPAMWGMAGPQTQQQPTGVGAPSPGAASVNAINPTMLTLPTMGGQGVSFGASAVPPGRPTPSPARFATQQGLQQVQXXXXXXXXXXXXXXXXXXXXXXXXXXXWLIAGTGGMVPAQSSHPRPPRGAQLSGPRPSQGSPSGGWGAAGKAHSIAVRGTAVPSSNSSRRPTGTAVHGRGSPGRQGNGXXXXXXXXXXXXXXXXXXXXGKRAKKTNSQALYVPKRSTPRGPGSESNAQPNAGSASVAAVPAAGS 2831
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17005.4997.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JEG7_9PHAE1.360e-12883.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17005contigEcto-sp13_S_contig17005:202..1574 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17005.4997.1mRNA_Ecto-sp13_S_contig17005.4997.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17005 149..2132 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17005.4997.1 ID=prot_Ecto-sp13_S_contig17005.4997.1|Name=mRNA_Ecto-sp13_S_contig17005.4997.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=310bp
MVPSTQPTMQVAGWQQPASQHVVTSVVATAGAAASNPSPTTAEGGNSGLA
AEAAPFIPAGAMGVGSPAMWGMAGPQLQQQPTGVGAPSPGAASVNAINPT
MLTPPTMGGQGVSFGASAVPHGRPTPSPARFATQRGLQQVQQQQHPQQQQ
PLFQLQQQQQQQWLIAGAGGMVSAQSNHPRPPRGAQVSGPRSSQGSPSGG
WGAASKVHSVAVRGTAVPTSTSSRRPTGTAVHGRGSPGRQGNRGGTSGGG
TAAQNVGSSTAAAGKRAKKTNSQALYVPKRSTPRGPGPGSNAQPNSGSAS
VAAVPAAGS*
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