prot_Ecto-sp13_S_contig17000.4993.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig17000.4993.1
Unique Nameprot_Ecto-sp13_S_contig17000.4993.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length194
Homology
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BLAST of mRNA_Ecto-sp13_S_contig17000.4993.1 vs. uniprot
Match: D7G3C4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C4_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 3.110e-52
Identity = 168/193 (87.05%), Postives = 170/193 (88.08%), Query Frame = 0 
Query:    1 MGRAMPPCKVLTPSRKLRQVAAARPVLYLGSGTPPPPRVILLDANSNSSSRGEETINDGSGGAVDLSGEAEEKGVVAVATEVEPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFERMIMGGSVGRGDRKPSSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLNAGGSSPGSVGSS 193
            MGRA+PPCKVLTPSRKLRQVAAARPVLYLGSGTPPPPRVILLDANSNSSSRGEETIND SGGA DLSGEAE KGVVAVATEVEPATP  XXXXXXXXXXXXXXXXXXX          R ERM+MGGSVGRGDRKPSSPS      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLNAGGSS GSVGSS
Sbjct: 1336 MGRAVPPCKVLTPSRKLRQVAAARPVLYLGSGTPPPPRVILLDANSNSSSRGEETINDESGGADDLSGEAEVKGVVAVATEVEPATPVAXXXXXXXXXXXXXXXXXXX----------RLERMVMGGSVGRGDRKPSSPSPGAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLNAGGSSVGSVGSS 1518
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BLAST of mRNA_Ecto-sp13_S_contig17000.4993.1 vs. uniprot
Match: A0A6H5KVX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX8_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 6.640e-44
Identity = 151/193 (78.24%), Postives = 156/193 (80.83%), Query Frame = 0 
Query:    1 MGRAMPPCKVLTPSRKLRQVAAARPVLYLGSGTPPPPRVILLDANSNSSSRGEETINDGSGGAVDLSGEAEEKGVVAVATEVEPATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFERMIMGGSVGRGDRKPSSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSLNAGGSSPGSVGSS 193
            MGRA+PPCKVLTPSRKLRQVAAARPVLYLGSGTPP PRVILLDANS+SSSRGEETIND S GAVDLSGEAEEKG+VAVATEVEPATP  XXXXXXXXXXXXXXXXXXXXXXXX     R ERM+ G SVGRGDR  SSPS                XXXXXXXXXXXXXXXXX    PSL+AGGSS  SVGSS
Sbjct: 1321 MGRAVPPCKVLTPSRKLRQVAAARPVLYLGSGTPPAPRVILLDANSDSSSRGEETINDESSGAVDLSGEAEEKGIVAVATEVEPATPVAXXXXXXXXXXXXXXXXXXXXXXXX-----RLERMMTGRSVGRGDRHLSSPSRGAMAAPAPESIAIAAXXXXXXXXXXXXXXXXXSDS-PSLSAGGSSTVSVGSS 1507
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig17000.4993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3C4_ECTSI3.110e-5287.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVX8_9PHAE6.640e-4478.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig17000contigEcto-sp13_S_contig17000:572..1972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig17000.4993.1mRNA_Ecto-sp13_S_contig17000.4993.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig17000 462..2199 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig17000.4993.1 ID=prot_Ecto-sp13_S_contig17000.4993.1|Name=mRNA_Ecto-sp13_S_contig17000.4993.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=194bp
MGRAMPPCKVLTPSRKLRQVAAARPVLYLGSGTPPPPRVILLDANSNSSS
RGEETINDGSGGAVDLSGEAEEKGVVAVATEVEPATPVAAAAAAAGEGTA
AAAAAAAAAAAATVTTTTRFERMIMGGSVGRGDRKPSSPSPGAKTAPAPE
SIAIAAAGGGQGGENEASVAAASASASPSLNAGGSSPGSVGSS*
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