prot_Ecto-sp13_S_contig16984.4971.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig16984.4971.1
Unique Nameprot_Ecto-sp13_S_contig16984.4971.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length88
Homology
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: A0A6H5L0H0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0H0_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 7.500e-9
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    1 MVCFGGVAQTVENVDAGLLVAPCALHLAPVS 31
            MVCFGGVA+ VEN DAGLL APCA HLAPVS
Sbjct:    2 MVCFGGVARNVENFDAGLLSAPCAPHLAPVS 32          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: D7G033_ECTSI (Ribosomal protein L35 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G033_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.350e-8
Identity = 26/27 (96.30%), Postives = 26/27 (96.30%), Query Frame = 0
Query:   62 SPVRLYVKGVMLGFKRGLRNTYHHTSL 88
             PVRLYVKGVMLGFKRGLRNTYHHTSL
Sbjct:   52 QPVRLYVKGVMLGFKRGLRNTYHHTSL 78          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: A0A836CIX4_9STRA (Ribosomal protein L35Ae-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX4_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 6.490e-6
Identity = 22/27 (81.48%), Postives = 25/27 (92.59%), Query Frame = 0
Query:   62 SPVRLYVKGVMLGFKRGLRNTYHHTSL 88
             PVRLYVKGV+LG+KRGLRN Y+HTSL
Sbjct:   16 QPVRLYVKGVVLGYKRGLRNQYNHTSL 42          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: A0A7S2SN13_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN13_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.780e-5
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0
Query:   59 WKHSPVRLYVKGVMLGFKRGLRNTYHHTSL 88
            +   PVRLYVKGV+LG+KRGLRN Y HTSL
Sbjct:   12 YSSQPVRLYVKGVVLGYKRGLRNQYCHTSL 41          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: A0A6U4KLG0_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4KLG0_HEMAN)

HSP 1 Score: 49.3 bits (116), Expect = 2.290e-5
Identity = 21/30 (70.00%), Postives = 23/30 (76.67%), Query Frame = 0
Query:   59 WKHSPVRLYVKGVMLGFKRGLRNTYHHTSL 88
            WK  P RLYVKG ++GFKRGLRN Y  TSL
Sbjct:   26 WKSQPCRLYVKGAIMGFKRGLRNQYEKTSL 55          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: L1I611_GUITC (Large subunit ribosomal protein L35Ae, cytoplasmic n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I611_GUITC)

HSP 1 Score: 48.9 bits (115), Expect = 2.700e-5
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query:   59 WKHSPVRLYVKGVMLGFKRGLRNTYHHTSL 88
            +K  PVRLYVKG +LG++RGLRN Y HTSL
Sbjct:   16 FKTQPVRLYVKGAVLGYRRGLRNQYEHTSL 45          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: A0A7S3GR16_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GR16_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 3.550e-5
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = 0
Query:   62 SPVRLYVKGVMLGFKRGLRNTYHHTSL 88
             PVRLYVKG +LG+KRG  NTYHHT+L
Sbjct:   35 QPVRLYVKGTVLGYKRGFTNTYHHTAL 61          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: A0A7R9U9P7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9P7_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 4.440e-5
Identity = 21/27 (77.78%), Postives = 24/27 (88.89%), Query Frame = 0
Query:   62 SPVRLYVKGVMLGFKRGLRNTYHHTSL 88
             PVRLYVKGV+LG+KRG RN Y+HTSL
Sbjct:    8 QPVRLYVKGVVLGYKRGQRNQYNHTSL 34          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: A0A812S7Z5_SYMMI (RPL35AC protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812S7Z5_SYMMI)

HSP 1 Score: 47.8 bits (112), Expect = 5.250e-5
Identity = 20/26 (76.92%), Postives = 23/26 (88.46%), Query Frame = 0
Query:   63 PVRLYVKGVMLGFKRGLRNTYHHTSL 88
            P RL+VKG +LGFKRG RNTYHHT+L
Sbjct:    1 PTRLHVKGTILGFKRGRRNTYHHTNL 26          
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Match: A0A3R7J585_9STRA (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A3R7J585_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 6.560e-5
Identity = 22/29 (75.86%), Postives = 24/29 (82.76%), Query Frame = 0
Query:   60 KHSPVRLYVKGVMLGFKRGLRNTYHHTSL 88
            K SP RLYVKGV LG+KRGLRN Y HT+L
Sbjct:  656 KSSPTRLYVKGVFLGYKRGLRNQYSHTAL 684          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig16984.4971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5L0H0_9PHAE7.500e-983.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G033_ECTSI1.350e-896.30Ribosomal protein L35 n=1 Tax=Ectocarpus siliculos... [more]
A0A836CIX4_9STRA6.490e-681.48Ribosomal protein L35Ae-domain-containing protein ... [more]
A0A7S2SN13_9STRA1.780e-573.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U4KLG0_HEMAN2.290e-570.00Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
L1I611_GUITC2.700e-570.00Large subunit ribosomal protein L35Ae, cytoplasmic... [more]
A0A7S3GR16_9STRA3.550e-574.07Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7R9U9P7_9STRA4.440e-577.78Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A812S7Z5_SYMMI5.250e-576.92RPL35AC protein (Fragment) n=1 Tax=Symbiodinium mi... [more]
A0A3R7J585_9STRA6.560e-575.86Uncharacterized protein n=17 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038661Ribosomal protein L35A superfamilyGENE3D2.40.10.190coord: 55..88
e-value: 2.4E-5
score: 25.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig16984contigEcto-sp13_S_contig16984:598..2703 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig16984.4971.1mRNA_Ecto-sp13_S_contig16984.4971.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig16984 598..2703 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig16984.4971.1 ID=prot_Ecto-sp13_S_contig16984.4971.1|Name=mRNA_Ecto-sp13_S_contig16984.4971.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
MVCFGGVAQTVENVDAGLLVAPCALHLAPVSSLCVQQPHDSKNPFDVYRL
TGWLDHVLWKHSPVRLYVKGVMLGFKRGLRNTYHHTSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038661L35A_sf