prot_Ecto-sp13_S_contig1696.4961.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1696.4961.1
Unique Nameprot_Ecto-sp13_S_contig1696.4961.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length96
Homology
BLAST of mRNA_Ecto-sp13_S_contig1696.4961.1 vs. uniprot
Match: D7G2I1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I1_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 1.790e-16
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0
Query:   51 SVYVALSRATGLDDLNLPFPVTLQDLNQPQNQDIIAIVTYLHRLDE 96
            +VYVALSRATGL DLNL FPVTLQDLNQPQN DI+AIV YLHRLDE
Sbjct:  273 AVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDE 318          
BLAST of mRNA_Ecto-sp13_S_contig1696.4961.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 2.080e-16
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 0
Query:   51 SVYVALSRATGLDDLNLPFPVTLQDLNQPQNQDIIAIVTYLHRLDE 96
            +VYVALSRATGL DLNL FPVTLQDLNQPQN DI+AIV YLHRLDE
Sbjct: 1980 AVYVALSRATGLGDLNLLFPVTLQDLNQPQNPDIVAIVNYLHRLDE 2025          
BLAST of mRNA_Ecto-sp13_S_contig1696.4961.1 vs. uniprot
Match: A0A6H5K6P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P6_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 1.000e-13
Identity = 35/48 (72.92%), Postives = 42/48 (87.50%), Query Frame = 0
Query:   49 PPSVYVALSRATGLDDLNLPFPVTLQDLNQPQNQDIIAIVTYLHRLDE 96
            P +VYVALSRAT LD LNL FPVTL+DLNQP ++DI+AI+ YLHRLD+
Sbjct:   18 PAAVYVALSRATSLDALNLLFPVTLEDLNQPPDRDILAIINYLHRLDK 65          
BLAST of mRNA_Ecto-sp13_S_contig1696.4961.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.080e-11
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0
Query:   49 PPSVYVALSRATGLDDLNLPFPVTLQDLNQPQNQDIIAIVTYLHRLDE 96
            P +VYVAL RAT L+ LNL FPVTL+DLNQP ++DI+AI+ YLHRLD+
Sbjct:  253 PAAVYVALFRATILEALNLLFPVTLEDLNQPPDRDILAIINYLHRLDK 300          
BLAST of mRNA_Ecto-sp13_S_contig1696.4961.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 9.990e-11
Identity = 30/52 (57.69%), Postives = 43/52 (82.69%), Query Frame = 0
Query:   45 PRTAPPSVYVALSRATGLDDLNLPFPVTLQDLNQPQNQDIIAIVTYLHRLDE 96
            P   P S Y+ALSRAT L+DL L FPVTL+DL++P+N+D++A++ +LHRL+E
Sbjct: 1853 PLVDPASSYLALSRATYLEDLYLLFPVTLEDLSRPRNKDVVALIEFLHRLEE 1904          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1696.4961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G2I1_ECTSI1.790e-1686.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3U9_ECTSI2.080e-1686.96ATP-dependent DNA helicase n=2 Tax=Ectocarpus sili... [more]
A0A6H5K6P6_9PHAE1.000e-1372.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPV6_9PHAE1.080e-1168.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN07_9PHAE9.990e-1157.69ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1696contigEcto-sp13_S_contig1696:11637..12653 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1696.4961.1mRNA_Ecto-sp13_S_contig1696.4961.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1696 11637..12653 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1696.4961.1 ID=prot_Ecto-sp13_S_contig1696.4961.1|Name=mRNA_Ecto-sp13_S_contig1696.4961.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=96bp
GERACLVYVKPGTCVDGHTFLLTLEVRGKPCARSSSTSAALRDMPRTAPP
SVYVALSRATGLDDLNLPFPVTLQDLNQPQNQDIIAIVTYLHRLDE
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